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Report for Sequence Feature Glyma10g40110
Feature Type: gene_model
Chromosome: Gm10
Start: 47616449
stop: 47620842
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma10g40110
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G22960 AT
Annotation by Michelle Graham. TAIR10: Pyruvate kinase family protein | chr3:8139369-8141771 FORWARD LENGTH=596
SoyBase E_val: 0 ISS
GO:0006096 GO-bp
Annotation by Michelle Graham. GO Biological Process: glycolysis
SoyBase N/A ISS
GO:0006629 GO-bp
Annotation by Michelle Graham. GO Biological Process: lipid metabolic process
SoyBase N/A ISS
GO:0009832 GO-bp
Annotation by Michelle Graham. GO Biological Process: plant-type cell wall biogenesis
SoyBase N/A ISS
GO:0010431 GO-bp
Annotation by Michelle Graham. GO Biological Process: seed maturation
SoyBase N/A ISS
GO:0016049 GO-bp
Annotation by Michelle Graham. GO Biological Process: cell growth
SoyBase N/A ISS
GO:0016126 GO-bp
Annotation by Michelle Graham. GO Biological Process: sterol biosynthetic process
SoyBase N/A ISS
GO:0030243 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellulose metabolic process
SoyBase N/A ISS
GO:0046686 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to cadmium ion
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0009570 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast stroma
SoyBase N/A ISS
GO:0000287 GO-mf
Annotation by Michelle Graham. GO Molecular Function: magnesium ion binding
SoyBase N/A ISS
GO:0003824 GO-mf
Annotation by Michelle Graham. GO Molecular Function: catalytic activity
SoyBase N/A ISS
GO:0004743 GO-mf
Annotation by Michelle Graham. GO Molecular Function: pyruvate kinase activity
SoyBase N/A ISS
GO:0030955 GO-mf
Annotation by Michelle Graham. GO Molecular Function: potassium ion binding
SoyBase N/A ISS
KOG2323
KOG
Pyruvate kinase
JGI ISS
PTHR11817 Panther
PYRUVATE KINASE
JGI ISS
PF00224 PFAM
Pyruvate kinase, barrel domain
JGI ISS
PF02887 PFAM
Pyruvate kinase, alpha/beta domain
JGI ISS
UniRef100_I1LEB8 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Pyruvate kinase n=1 Tax=Glycine max RepID=I1LEB8_SOYBN
SoyBase E_val: 0 ISS
UniRef100_I1LEB8 UniRef
Annotation by Michelle Graham. Best UniRef hit: Pyruvate kinase n=1 Tax=Glycine max RepID=I1LEB8_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma10g40110
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma10g40110
Paralog Evidence Comments
Glyma20g27300 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma10g40110 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.10g255100 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma10g40110
Transcripts of Glyma10g40110
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma10g40110.2 sequence type=transcript gene model=Glyma10g40110 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATTTGTGTTCCATTAAATATTAAATATTAAATATTCTCTGCGCGGCCAAACCTACTTCTTTCTTTCGGTAAACTCCCCGGTATCTGCCGCAGCCAACATCCAAAGTCCAACAAACATTTGGCGGAGTTTACAACAAAACTCTTCAAAACCCACATCCAAATCGTCGTAAAGTTCAAATCTTTGATACCTCATTTCGATTCAGACCTATATTGTTCCCAGCAACAGGCTTCCATTAACTTCTCTCTGCGGCGATGGTTTTGAAGTCAATGGTTGCTTCCGCGAGCGATCTAAGTCTCGTGTCTGTTGCAGGGAACTCTCCCCTTGATTTCAAGAATCGGGTTTTCGGTGGCCGACTCATTAGCCTCGGATTTCGTTTCAACAAAGGTAGTAAATGCAAGGGGAATGAAAGGTTTAACTTTGAGGTTCGTGCAGCTGTGGAAGTGGGTGTGGAGAGATCGAAGAGTAAGGCTTTGGAGGGTGGTTTTGGGTTGGATGTGGTTTCAGAGGCAGAGTTAACAGTGAAGGGTTTTGCGGGGTTGAGGAAGACCAAACTCGTGTGCACTGTTGGTCCTGCTTGCAGCTCTTTGGAGGATCTTGAGAACTTGGCTCTTGGAGGCATGAGTGTTGCCAGGCTCAACATGTGCCATGGGACCAGGGACTGGCACCGTGATGTGATTGGGAAGATCAAGAAGTTGAATGAGGAGAAAGGGTTCTGTGTTTCTGTGATGATTGACACTGAGGGTAGTCAGATTCATGTTGTTGATCATGGAGCTCCTTCCTCGGTTAAAGTTGAGGAAGGTTCAAATTGGGTGTTTACTGCTGAACATTTTGAGGGTTCTCGCCCATTCACTGTTCAAACGAATTATAGAGGTTTTTCTGAAGGTATCGAAATGGGTGATGAACTTGTAATTGATGGTGGAATGGCATGCTTTGAAGTTGTTGAAAAGACTGGAAATGATTTGCATTGCAAGTGCATAGATGCTGGTCTTTTCCTGCCTGGAGCCAAACTTAGTTTCTGGAGAGATGGAAAGCTTGTGAGAGGGAATAACAAGCTCCCCACTCTATCAACAAAGGATTGGGCTGACATTGACTTTGGTATAGCAGAGGGAGTTGATTTTTTTGCCTTATCTTTTGTCAATCATGCTGATTCTGTTAAGGATCTAAAGAACTACCTCTCTTCAAAGTCAACCAAATCCATAAAAGTTTTGGCAAAGATAGAAAGCTCAGAATCTCTTCATAAACTGGAGGAAATAGTGCGAGCTTCTGATGGGATCATGGTGGCTCGGGGTGACCTTGGGGTCGAAATACCACTTGAACAGATTCCTACGGTCCAAGAGGATATAATTTATGTATGCAGACAATTAAACAAGCCAGTGATTGTAGCTTCTCAGCTTCTTGAGTCAATGGTCGAGTATCCAACACCAACACGTGCTGAGGTAGCAGATGTTTCTGAAGCAGTTAGACAGTATGCTGATGCTTTGATGTTGTCTGGAGAGTCAGCTATTGGATCATATGCACAAAAAGCTTTGGCAGTCTTGGATATGGCTAGCAGTAGAATGGAATCATGGAGTCGGGAGGAAAACAGACAAAGTCTTGTTAACTACCATCAACTTGGAGCATCATTGCCAGAATGCATAACTGAGCAAATATGCAATTGTGCTGTTGAAATGGGTACTTAATATTCTTCTTGCAACTTCCTTCTATCATGAATTCTGCATAGTGGCAAGAGTGTAATCATAATAAAAATTTACCCATTTGTTCTGCAGCCAACAACCTTGGTGTGGATGCCATCTTTGTGTACACAAAGTATGGACACATGGCATCACTTCTATCACGCAACCGCCCAAATCCTCCCATCTTTGCTTTCACTAACGATGACAGTACCCGCATGGCTCTGACTTTGCAATGGGGTGTTGTACCCCTTCTGGTTGATTTGTCCGATGATGCTGAATCCAACATCTCAAAGTCTGTCCAACTTATGAAATCTAGAGGGTTGATCAGCCAAGGAGATGTTGTTCTAGTGGTCTCAGATGTTGCTCCAACACGTGCCACTCCTATGGCTTTCCAGTCTATTCAGGTGAAGACTATTATCTAAAACGCAAGGCTGCAAAAATATTGAAGGACACGTGTCTGTGTATTTTATAGGCTTGGGATAGGATAGTATTGTATTATTGGTTTCTTGTCTTTTTTTTTATTGGTTTCTTGTCCTTATGTAAAACAACAAAATTTATAAATTCCAAATGGTGGAACTCTAGCAAGTTTTGAAACCTCTTTCAAGAGATTCTTATGAATTACACTTCGTGAATTGCCCATTGTAAGTCACTAATACAGTTGCACCAATATATGGCAATTATATTTGATATATCAACTTTGATTGATTGTGATGAACCACCAGA
Coding sequences of Glyma10g40110
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma10g40110.1 sequence type=CDS gene model=Glyma10g40110 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTTTTGAAGTCAATGGTTGCTTCCGCGAGCGATCTAAGTCTCGTGTCTGTTGCAGGGAACTCTCCCCTTGATTTCAAGAATCGGGTTTTCGGTGGCCGACTCATTAGCCTCGGATTTCGTTTCAACAAAGGTAGTAAATGCAAGGGGAATGAAAGGTTTAACTTTGAGGTTCGTGCAGCTGTGGAAGTGGGTGTGGAGAGATCGAAGAGTAAGGCTTTGGAGGGTGGTTTTGGGTTGGATGTGGTTTCAGAGGCAGAGTTAACAGTGAAGGGTTTTGCGGGGTTGAGGAAGACCAAACTCGTGTGCACTGTTGGTCCTGCTTGCAGCTCTTTGGAGGATCTTGAGAACTTGGCTCTTGGAGGCATGAGTGTTGCCAGGCTCAACATGTGCCATGGGACCAGGGACTGGCACCGTGATGTGATTGGGAAGATCAAGAAGTTGAATGAGGAGAAAGGGTTCTGTGTTTCTGTGATGATTGACACTGAGGGTAGTCAGATTCATGTTGTTGATCATGGAGCTCCTTCCTCGGTTAAAGTTGAGGAAGGTTCAAATTGGGTGTTTACTGCTGAACATTTTGAGGGTTCTCGCCCATTCACTGTTCAAACGAATTATAGAGGTTTTTCTGAAGGTATCGAAATGGGTGATGAACTTGTAATTGATGGTGGAATGGCATGCTTTGAAGTTGTTGAAAAGACTGGAAATGATTTGCATTGCAAGTGCATAGATGCTGGTCTTTTCCTGCCTGGAGCCAAACTTAGTTTCTGGAGAGATGGAAAGCTTGTGAGAGGGAATAACAAGCTCCCCACTCTATCAACAAAGGATTGGGCTGACATTGACTTTGGTATAGCAGAGGGAGTTGATTTTTTTGCCTTATCTTTTGTCAATCATGCTGATTCTGTTAAGGATCTAAAGAACTACCTCTCTTCAAAGTCAACCAAATCCATAAAAGTTTTGGCAAAGATAGAAAGCTCAGAATCTCTTCATAAACTGGAGGAAATAGTGCGAGCTTCTGATGGGATCATGGTGGCTCGGGGTGACCTTGGGGTCGAAATACCACTTGAACAGATTCCTACGGTCCAAGAGGATATAATTTATGTATGCAGACAATTAAACAAGCCAGTGATTGTAGCTTCTCAGCTTCTTGAGTCAATGGTCGAGTATCCAACACCAACACGTGCTGAGGTAGCAGATGTTTCTGAAGCAGTTAGACAGTATGCTGATGCTTTGATGTTGTCTGGAGAGTCAGCTATTGGATCATATGCACAAAAAGCTTTGGCAGTCTTGGATATGGCTAGCAGTAGAATGGAATCATGGAGTCGGGAGGAAAACAGACAAAGTCTTGTTAACTACCATCAACTTGGAGCATCATTGCCAGAATGCATAACTGAGCAAATATGCAATTGTGCTGTTGAAATGGCCAACAACCTTGGTGTGGATGCCATCTTTGTGTACACAAAGTATGGACACATGGCATCACTTCTATCACGCAACCGCCCAAATCCTCCCATCTTTGCTTTCACTAACGATGACAGTACCCGCATGGCTCTGACTTTGCAATGGGGTGTTGTACCCCTTCTGGTTGATTTGTCCGATGATGCTGAATCCAACATCTCAAAGTCTGTCCAACTTATGAAATCTAGAGGGTTGATCAGCCAAGGAGATGTTGTTCTAGTGGTCTCAGATGTTGCTCCAACACGTGCCACTCCTATGGCTTTCCAGTCTATTCAGGTGAAGACTATTATCTAA
>Glyma10g40110.2 sequence type=CDS gene model=Glyma10g40110 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTTTTGAAGTCAATGGTTGCTTCCGCGAGCGATCTAAGTCTCGTGTCTGTTGCAGGGAACTCTCCCCTTGATTTCAAGAATCGGGTTTTCGGTGGCCGACTCATTAGCCTCGGATTTCGTTTCAACAAAGGTAGTAAATGCAAGGGGAATGAAAGGTTTAACTTTGAGGTTCGTGCAGCTGTGGAAGTGGGTGTGGAGAGATCGAAGAGTAAGGCTTTGGAGGGTGGTTTTGGGTTGGATGTGGTTTCAGAGGCAGAGTTAACAGTGAAGGGTTTTGCGGGGTTGAGGAAGACCAAACTCGTGTGCACTGTTGGTCCTGCTTGCAGCTCTTTGGAGGATCTTGAGAACTTGGCTCTTGGAGGCATGAGTGTTGCCAGGCTCAACATGTGCCATGGGACCAGGGACTGGCACCGTGATGTGATTGGGAAGATCAAGAAGTTGAATGAGGAGAAAGGGTTCTGTGTTTCTGTGATGATTGACACTGAGGGTAGTCAGATTCATGTTGTTGATCATGGAGCTCCTTCCTCGGTTAAAGTTGAGGAAGGTTCAAATTGGGTGTTTACTGCTGAACATTTTGAGGGTTCTCGCCCATTCACTGTTCAAACGAATTATAGAGGTTTTTCTGAAGGTATCGAAATGGGTGATGAACTTGTAATTGATGGTGGAATGGCATGCTTTGAAGTTGTTGAAAAGACTGGAAATGATTTGCATTGCAAGTGCATAGATGCTGGTCTTTTCCTGCCTGGAGCCAAACTTAGTTTCTGGAGAGATGGAAAGCTTGTGAGAGGGAATAACAAGCTCCCCACTCTATCAACAAAGGATTGGGCTGACATTGACTTTGGTATAGCAGAGGGAGTTGATTTTTTTGCCTTATCTTTTGTCAATCATGCTGATTCTGTTAAGGATCTAAAGAACTACCTCTCTTCAAAGTCAACCAAATCCATAAAAGTTTTGGCAAAGATAGAAAGCTCAGAATCTCTTCATAAACTGGAGGAAATAGTGCGAGCTTCTGATGGGATCATGGTGGCTCGGGGTGACCTTGGGGTCGAAATACCACTTGAACAGATTCCTACGGTCCAAGAGGATATAATTTATGTATGCAGACAATTAAACAAGCCAGTGATTGTAGCTTCTCAGCTTCTTGAGTCAATGGTCGAGTATCCAACACCAACACGTGCTGAGGTAGCAGATGTTTCTGAAGCAGTTAGACAGTATGCTGATGCTTTGATGTTGTCTGGAGAGTCAGCTATTGGATCATATGCACAAAAAGCTTTGGCAGTCTTGGATATGGCTAGCAGTAGAATGGAATCATGGAGTCGGGAGGAAAACAGACAAAGTCTTGTTAACTACCATCAACTTGGAGCATCATTGCCAGAATGCATAACTGAGCAAATATGCAATTGTGCTGTTGAAATGGGTACTTAA
Predicted protein sequences of Glyma10g40110
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma10g40110.1 sequence type=predicted peptide gene model=Glyma10g40110 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVLKSMVASASDLSLVSVAGNSPLDFKNRVFGGRLISLGFRFNKGSKCKGNERFNFEVRAAVEVGVERSKSKALEGGFGLDVVSEAELTVKGFAGLRKTKLVCTVGPACSSLEDLENLALGGMSVARLNMCHGTRDWHRDVIGKIKKLNEEKGFCVSVMIDTEGSQIHVVDHGAPSSVKVEEGSNWVFTAEHFEGSRPFTVQTNYRGFSEGIEMGDELVIDGGMACFEVVEKTGNDLHCKCIDAGLFLPGAKLSFWRDGKLVRGNNKLPTLSTKDWADIDFGIAEGVDFFALSFVNHADSVKDLKNYLSSKSTKSIKVLAKIESSESLHKLEEIVRASDGIMVARGDLGVEIPLEQIPTVQEDIIYVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSYAQKALAVLDMASSRMESWSREENRQSLVNYHQLGASLPECITEQICNCAVEMANNLGVDAIFVYTKYGHMASLLSRNRPNPPIFAFTNDDSTRMALTLQWGVVPLLVDLSDDAESNISKSVQLMKSRGLISQGDVVLVVSDVAPTRATPMAFQSIQVKTII*
>Glyma10g40110.2 sequence type=predicted peptide gene model=Glyma10g40110 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVLKSMVASASDLSLVSVAGNSPLDFKNRVFGGRLISLGFRFNKGSKCKGNERFNFEVRAAVEVGVERSKSKALEGGFGLDVVSEAELTVKGFAGLRKTKLVCTVGPACSSLEDLENLALGGMSVARLNMCHGTRDWHRDVIGKIKKLNEEKGFCVSVMIDTEGSQIHVVDHGAPSSVKVEEGSNWVFTAEHFEGSRPFTVQTNYRGFSEGIEMGDELVIDGGMACFEVVEKTGNDLHCKCIDAGLFLPGAKLSFWRDGKLVRGNNKLPTLSTKDWADIDFGIAEGVDFFALSFVNHADSVKDLKNYLSSKSTKSIKVLAKIESSESLHKLEEIVRASDGIMVARGDLGVEIPLEQIPTVQEDIIYVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSYAQKALAVLDMASSRMESWSREENRQSLVNYHQLGASLPECITEQICNCAVEMGT*