Report for Sequence Feature Glyma10g34280
Feature Type: gene_model
Chromosome: Gm10
Start: 42438585
stop: 42439974
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma10g34280
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G10520 AT
Annotation by Michelle Graham. TAIR10: haemoglobin 2 | chr3:3276516-3277765 REVERSE LENGTH=158
SoyBase E_val: 8.00E-42 ISS
GO:0006631 GO-bp
Annotation by Michelle Graham. GO Biological Process: fatty acid metabolic process
SoyBase N/A ISS
GO:0009735 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to cytokinin stimulus
SoyBase N/A ISS
GO:0015671 GO-bp
Annotation by Michelle Graham. GO Biological Process: oxygen transport
SoyBase N/A ISS
GO:0019432 GO-bp
Annotation by Michelle Graham. GO Biological Process: triglyceride biosynthetic process
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0005344 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxygen transporter activity
SoyBase N/A ISS
GO:0005506 GO-mf
Annotation by Michelle Graham. GO Molecular Function: iron ion binding
SoyBase N/A ISS
GO:0019825 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxygen binding
SoyBase N/A ISS
GO:0020037 GO-mf
Annotation by Michelle Graham. GO Molecular Function: heme binding
SoyBase N/A ISS
PTHR22924 Panther
LEGHEMOGLOBIN
JGI ISS
PTHR22924:SF4 Panther
NON-SYMBIOTIC HEMOGLOBIN (RHB)
JGI ISS
PF00042 PFAM
Globin
JGI ISS
UniRef100_P02235 UniRef
Annotation by Michelle Graham. Best UniRef hit: Leghemoglobin C1 n=1 Tax=Glycine max RepID=LGB1_SOYBN
SoyBase E_val: 6.00E-98 ISS
UniRef100_P02235 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Leghemoglobin C1 n=1 Tax=Glycine max RepID=LGB1_SOYBN
SoyBase E_val: 6.00E-98 ISS
Proteins Associated with Glyma10g34280
Locus Gene Symbol Protein Name
Lbc2C Leghemoglobin C2 gene C
Expression Patterns of Glyma10g34280
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma10g34280 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.10g199000 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma10g34280
Coding sequences of Glyma10g34280
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma10g34280.1 sequence type=CDS gene model=Glyma10g34280 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGTGCTTTCACTGAGAAGCAAGAGGCTTTGGTGAGTAGCTCATTCGAAGCATTCAAGGCAAACATTCCTCAATACAGCGTTGTGTTCTACAATTCGATACTGGAGAAAGCACCTGCAGCAAAGGACTTGTTCTCATTTCTAGCAAATGGAGTAGACCCCACTAATCCTAAGCTCACGGGCCATGCTGAAAAGCTTTTTGCATTGGTGCGTGACTCAGCTGGTCAACTTAAAACAAATGGAACAGTGGTGGCTGATGCTGCACTTGTTTCTATCCATGCCCAAAAAGCAGTCACTGATCCTCAGTTCGTGGTGGTTAAAGAAGCACTGCTGAAAACAATAAAGGAAGCTGTTGGCGGCAATTGGAGTGACGAATTGAGCAGTGCTTGGGAAGTAGCCTATGATGAATTGGCAGCAGCAATTAAAAAGGCATAA
Predicted protein sequences of Glyma10g34280
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma10g34280.1 sequence type=predicted peptide gene model=Glyma10g34280 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGAFTEKQEALVSSSFEAFKANIPQYSVVFYNSILEKAPAAKDLFSFLANGVDPTNPKLTGHAEKLFALVRDSAGQLKTNGTVVADAALVSIHAQKAVTDPQFVVVKEALLKTIKEAVGGNWSDELSSAWEVAYDELAAAIKKA*