Report for Sequence Feature Glyma10g32670
Feature Type: gene_model
Chromosome: Gm10
Start: 41086662
stop: 41098532
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma10g32670
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G23430 AT
Annotation by Michelle Graham. TAIR10: phosphate 1 | chr3:8387818-8393242 REVERSE LENGTH=782
SoyBase E_val: 0 ISS
GO:0000041 GO-bp
Annotation by Michelle Graham. GO Biological Process: transition metal ion transport
SoyBase N/A ISS
GO:0006817 GO-bp
Annotation by Michelle Graham. GO Biological Process: phosphate ion transport
SoyBase N/A ISS
GO:0006826 GO-bp
Annotation by Michelle Graham. GO Biological Process: iron ion transport
SoyBase N/A ISS
GO:0009611 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to wounding
SoyBase N/A ISS
GO:0009805 GO-bp
Annotation by Michelle Graham. GO Biological Process: coumarin biosynthetic process
SoyBase N/A ISS
GO:0010106 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellular response to iron ion starvation
SoyBase N/A ISS
GO:0010167 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to nitrate
SoyBase N/A ISS
GO:0015698 GO-bp
Annotation by Michelle Graham. GO Biological Process: inorganic anion transport
SoyBase N/A ISS
GO:0015706 GO-bp
Annotation by Michelle Graham. GO Biological Process: nitrate transport
SoyBase N/A ISS
GO:0016036 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellular response to phosphate starvation
SoyBase N/A ISS
GO:0005794 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus
SoyBase N/A ISS
GO:0005802 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: trans-Golgi network
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0016021 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane
SoyBase N/A ISS
GO:0015114 GO-mf
Annotation by Michelle Graham. GO Molecular Function: phosphate ion transmembrane transporter activity
SoyBase N/A ISS
KOG1162
KOG
Predicted small molecule transporter
JGI ISS
PTHR10783 Panther
XENOTROPIC AND POLYTROPIC MURINE LEUKEMIA VIRUS RECEPTOR
JGI ISS
PTHR10783:SF4 Panther
XENOTROPIC AND POLYTROPIC MURINE LEUKEMIA VIRUS RECEPTOR XPR1
JGI ISS
PF03105 PFAM
SPX domain
JGI ISS
PF03124 PFAM
EXS family
JGI ISS
UniRef100_G7I4U1 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Pho1-like protein n=1 Tax=Medicago truncatula RepID=G7I4U1_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI000233D232 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233D232 related cluster n=1 Tax=unknown RepID=UPI000233D232
SoyBase E_val: 0 ISS
Expression Patterns of Glyma10g32670
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma10g32670
Paralog Evidence Comments
Glyma20g34930 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma10g32670 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.10g183300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma10g32670
Transcripts of Glyma10g32670
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma10g32670.2 sequence type=transcript gene model=Glyma10g32670 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGACACCCCCACTTCAAATAAGCTATCTTCCACCTTTTTAATTCCTCTAACACAACATCACTCTCTTCACCTCCAGGCTCCTTTAATTTCTATCTTCACCCACAAAATTAAGATAAACAAATGGTGAAGTTCTCAAAGGAGCTAGAAGCCCAACTGATACCAGAATGGAAAGAGGCCTTCGTCAACTATTGGCAGCTCAAGAAGCAGATAAAGAGGATCAAGCTCTCAAGAATTCCCAAGCAATCCCACCACCACGCTAAACCAGACTTTGGTCTGTCCATTTTCGATTCCTTAAGCTTCTTTGTCAAAAATATTGCTCAAAACTTTTCAGCTTCCGACCATCATGACCTCAACATCATTCAGGTGAGGAAGAAAACCACAAAGGATGACGAAGAAGAAATCTACGAAACAGAACTTGCACAATTATTTTCAGAGGAGGACGAGGTACGTGTATTTTTTATGAGGCTGGATGAAGAGCTGAACAAGGTGAATCAATTTTACCGGAGACAAGAGAGTGAGTTCATTGAAAGAGGAGAAACCCTGAACAAGCAGCTTCAAATATTGCTTGACCTCAAGCAAATTATCAGTGACTGTCGCCGGAAAAATTCTCCGTCAAAGCCATATAGCACCGGAGTATCCCCTCAATATTCTCCAACCCGGGATTCTGATTATTCCGTTTGTGCAGAAAATTTTGGAGATTCAGATGAAACAAATTCAGAGATTTCACAGACGGATGAGGTAATCACAACATTAGAGAAAAATGGTATAAGTTTCGTTAATTCAGTGATGAGGACAAAAACGAAGAAGGGAAAGCCAAAGATGGCAATGAGAATTGATGTTCCAGCCACTAATCCAACTCGAGCAATTACAGCTATCACTAGCATGCTGTGGGAGGATTTAGTCAAGAATCCCACCGGAGACTTGGTTCACAAGAGAAAGCTCCAATGTGCTGAGAAAATGATTAGAGGTGCCTTTGTCGAGCTCTATAAAGGATTTGGCCTACTCAAAACTTACAGCTCACTCAATATGGTAGCATTTACAAAGATATTAAAGAAATTTGACAAGGTATCTTGTCAAAAAGCTTCTGCAAATTATTTAAAAGAAGTGAAGAGATCCCATTTCGTTAGTTCTGACAAGGTTTTTAGACTAATGGACGAAGTGGAATCCATATTCACCAAGCACTTTGCCAACAACGATAGGAAAAAGGCAATGAAATTTTTAAGACCCCAACAACATAAAGATTCTCACATGGTCACCTTCCTTGTCGGGTTGTCTACAGGTTGCTTTGTATCCTTGTTTTGTGTATATGCAATCTTGGCACATTTGTGCGGTATATTCTCCTCTAATAACGAGCCAGCTTATATGGAAACAGTCTACCCCGTTTTCAGTGTGTTTACATTGTTAAGCCTGCACTTGTTTATGTATGGATGCAACCTGTTCATGTGGAAGAATACAAGAATCAATTATAATTTCATATTTGAATTCTCACCAAGCACAGCACTGAAGCACAGAGATGCGTTTCTGATGAGCACTACCTTAATGACAACTGTGATTGGGGCAATGGTCATACATCTGCTTCTAAGGGCTGCAAACTTTTCTCCTACGGAAATTGATGCCATTCCTGGAATTCTTCTTCTGTTTTTCGTAGTATTGCTCATTTGCCCATTTGACCTTTTTTATCGCCCCACACGTTACTGCTTCATCCGTGTTATTCGCAACATAGTATGCTCTCCCTTTTATAAGGTTCTTCTAGTAGACTTTTTTATGGCTGACCAACTAACTAGCCAGATTCCATTGCTTAGGCATTTGGAAAGTGCAGGTTGTCACATTTTTGCTAGAGCATTCAAAACACACCACCCTGATACCTGCCATTCTGGAAGATTATATATGGAAATAACTTACATCATCTCATTTTTACCATATTATTGGCGTGCTTTGCAGTGTGCAAGACGGTGGTTTGATGATGGTGATGTGAACCATTTGGCTAACATGGGAAAGTATGTCTCAGCAATGGTGGCAGCAGGGGCTAGAGTAACATACAGCAGGCAAAATGACAATCTATGGTTTGCTATAGTCTTAATCACTTCTGTGGTGGCCACAATGTATCAACTGTACTGGGATTTTATCAAGGACTGGGGATTTCTTAATCCAAAATCCATAAATCCATGGCTCAGAGATGATCTAATTCTAAAGAATAAAAGCATATACTATATGTCTATTGTCTTAAACATTGTCTTAAGAGTGACGTGGGTGGAGACTATCATGCACTTCAAAGTAGGGCCTGTTCAGTCACGACTACTAGACTTTTTATTAGCTGCACTTGAGGTTATTCGGAGAGGGCATTGGAATTTCTACAGGTTGGAAAATGAACATCTAAATAACGTTGGTCATTACCGGGCAGTGAAGACAGTTCCACTACCATTTCGAGAGATAGACTCTGACTGATGAGGTGATTTTTCTTGTACAAAAAAAGGTGTCCTATAGACATGCTAACAAAATAGAGGCATGGAGTGTAAAGAATAAAGAGTGGAGGAGGATAGAAACTTCGCTTAATCTGTTTCTTGTTTATTGCCTCTTTTTCAGGCAACTGGACATGCTAAAAGTCGTTCAAAGAACGAATTGTTATTTTTTCCTGATTTTAGTAAATATTGAAATGTTAGTGTTGTTTATAATTTCGTTTTGTCGGGCAAAACAAATTTGTTTTCTAATCA
Coding sequences of Glyma10g32670
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma10g32670.1 sequence type=CDS gene model=Glyma10g32670 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGAAGTTCTCAAAGGAGCTAGAAGCCCAACTGATACCAGAATGGAAAGAGGCCTTCGTCAACTATTGGCAGCTCAAGAAGCAGATAAAGAGGATCAAGCTCTCAAGAATTCCCAAGCAATCCCACCACCACGCTAAACCAGACTTTGGTCTGTCCATTTTCGATTCCTTAAGCTTCTTTGTCAAAAATATTGCTCAAAACTTTTCAGCTTCCGACCATCATGACCTCAACATCATTCAGGTGAGGAAGAAAACCACAAAGGATGACGAAGAAGAAATCTACGAAACAGAACTTGCACAATTATTTTCAGAGGAGGACGAGGTACGTGTATTTTTTATGAGGCTGGATGAAGAGCTGAACAAGGTGAATCAATTTTACCGGAGACAAGAGAGTGAGTTCATTGAAAGAGGAGAAACCCTGAACAAGCAGCTTCAAATATTGCTTGACCTCAAGCAAATTATCAGTGACTGTCGCCGGAAAAATTCTCCGTCAAAGCCATATAGCACCGGAGTATCCCCTCAATATTCTCCAACCCGGGATTCTGATTATTCCGAAAATTTTGGAGATTCAGATGAAACAAATTCAGAGATTTCACAGACGGATGAGGTAATCACAACATTAGAGAAAAATGGTATAAGTTTCGTTAATTCAGTGATGAGGACAAAAACGAAGAAGGGAAAGCCAAAGATGGCAATGAGAATTGATGTTCCAGCCACTAATCCAACTCGAGCAATTACAGCTATCACTAGCATGCTGTGGGAGGATTTAGTCAAGAATCCCACCGGAGACTTGGTTCACAAGAGAAAGCTCCAATGTGCTGAGAAAATGATTAGAGGTGCCTTTGTCGAGCTCTATAAAGGATTTGGCCTACTCAAAACTTACAGCTCACTCAATATGGTAGCATTTACAAAGATATTAAAGAAATTTGACAAGGTATCTTGTCAAAAAGCTTCTGCAAATTATTTAAAAGAAGTGAAGAGATCCCATTTCGTTAGTTCTGACAAGGTTTTTAGACTAATGGACGAAGTGGAATCCATATTCACCAAGCACTTTGCCAACAACGATAGGAAAAAGGCAATGAAATTTTTAAGACCCCAACAACATAAAGATTCTCACATGGTCACCTTCCTTGTCGGGTTGTCTACAGGTTGCTTTGTATCCTTGTTTTGTGTATATGCAATCTTGGCACATTTGTGCGGTATATTCTCCTCTAATAACGAGCCAGCTTATATGGAAACAGTCTACCCCGTTTTCAGTGTGTTTACATTGTTAAGCCTGCACTTGTTTATGTATGGATGCAACCTGTTCATGTGGAAGAATACAAGAATCAATTATAATTTCATATTTGAATTCTCACCAAGCACAGCACTGAAGCACAGAGATGCGTTTCTGATGAGCACTACCTTAATGACAACTGTGATTGGGGCAATGGTCATACATCTGCTTCTAAGGGCTGCAAACTTTTCTCCTACGGAAATTGATGCCATTCCTGGAATTCTTCTTCTGTTTTTCGTAGTATTGCTCATTTGCCCATTTGACCTTTTTTATCGCCCCACACGTTACTGCTTCATCCGTGTTATTCGCAACATAGTATGCTCTCCCTTTTATAAGGTTCTTCTAGTAGACTTTTTTATGGCTGACCAACTAACTAGCCAGATTCCATTGCTTAGGCATTTGGAAAGTGCAGGTTGTCACATTTTTGCTAGAGCATTCAAAACACACCACCCTGATACCTGCCATTCTGGAAGATTATATATGGAAATAACTTACATCATCTCATTTTTACCATATTATTGGCGTGCTTTGCAGTGTGCAAGACGGTGGTTTGATGATGGTGATGTGAACCATTTGGCTAACATGGGAAAGTATGTCTCAGCAATGGTGGCAGCAGGGGCTAGAGTAACATACAGCAGGCAAAATGACAATCTATGGTTTGCTATAGTCTTAATCACTTCTGTGGTGGCCACAATGTATCAACTGTACTGGGATTTTATCAAGGACTGGGGATTTCTTAATCCAAAATCCATAAATCCATGGCTCAGAGATGATCTAATTCTAAAGAATAAAAGCATATACTATATGTCTATTGTCTTAAACATTGTCTTAAGAGTGACGTGGGTGGAGACTATCATGCACTTCAAAGTAGGGCCTGTTCAGTCACGACTACTAGACTTTTTATTAGCTGCACTTGAGGTTATTCGGAGAGGGCATTGGAATTTCTACAGGTTGGAAAATGAACATCTAAATAACGTTGGTCATTACCGGGCAGTGAAGACAGTTCCACTACCATTTCGAGAGATAGACTCTGACTGA
>Glyma10g32670.2 sequence type=CDS gene model=Glyma10g32670 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGAAGTTCTCAAAGGAGCTAGAAGCCCAACTGATACCAGAATGGAAAGAGGCCTTCGTCAACTATTGGCAGCTCAAGAAGCAGATAAAGAGGATCAAGCTCTCAAGAATTCCCAAGCAATCCCACCACCACGCTAAACCAGACTTTGGTCTGTCCATTTTCGATTCCTTAAGCTTCTTTGTCAAAAATATTGCTCAAAACTTTTCAGCTTCCGACCATCATGACCTCAACATCATTCAGGTGAGGAAGAAAACCACAAAGGATGACGAAGAAGAAATCTACGAAACAGAACTTGCACAATTATTTTCAGAGGAGGACGAGGTACGTGTATTTTTTATGAGGCTGGATGAAGAGCTGAACAAGGTGAATCAATTTTACCGGAGACAAGAGAGTGAGTTCATTGAAAGAGGAGAAACCCTGAACAAGCAGCTTCAAATATTGCTTGACCTCAAGCAAATTATCAGTGACTGTCGCCGGAAAAATTCTCCGTCAAAGCCATATAGCACCGGAGTATCCCCTCAATATTCTCCAACCCGGGATTCTGATTATTCCGTTTGTGCAGAAAATTTTGGAGATTCAGATGAAACAAATTCAGAGATTTCACAGACGGATGAGGTAATCACAACATTAGAGAAAAATGGTATAAGTTTCGTTAATTCAGTGATGAGGACAAAAACGAAGAAGGGAAAGCCAAAGATGGCAATGAGAATTGATGTTCCAGCCACTAATCCAACTCGAGCAATTACAGCTATCACTAGCATGCTGTGGGAGGATTTAGTCAAGAATCCCACCGGAGACTTGGTTCACAAGAGAAAGCTCCAATGTGCTGAGAAAATGATTAGAGGTGCCTTTGTCGAGCTCTATAAAGGATTTGGCCTACTCAAAACTTACAGCTCACTCAATATGGTAGCATTTACAAAGATATTAAAGAAATTTGACAAGGTATCTTGTCAAAAAGCTTCTGCAAATTATTTAAAAGAAGTGAAGAGATCCCATTTCGTTAGTTCTGACAAGGTTTTTAGACTAATGGACGAAGTGGAATCCATATTCACCAAGCACTTTGCCAACAACGATAGGAAAAAGGCAATGAAATTTTTAAGACCCCAACAACATAAAGATTCTCACATGGTCACCTTCCTTGTCGGGTTGTCTACAGGTTGCTTTGTATCCTTGTTTTGTGTATATGCAATCTTGGCACATTTGTGCGGTATATTCTCCTCTAATAACGAGCCAGCTTATATGGAAACAGTCTACCCCGTTTTCAGTGTGTTTACATTGTTAAGCCTGCACTTGTTTATGTATGGATGCAACCTGTTCATGTGGAAGAATACAAGAATCAATTATAATTTCATATTTGAATTCTCACCAAGCACAGCACTGAAGCACAGAGATGCGTTTCTGATGAGCACTACCTTAATGACAACTGTGATTGGGGCAATGGTCATACATCTGCTTCTAAGGGCTGCAAACTTTTCTCCTACGGAAATTGATGCCATTCCTGGAATTCTTCTTCTGTTTTTCGTAGTATTGCTCATTTGCCCATTTGACCTTTTTTATCGCCCCACACGTTACTGCTTCATCCGTGTTATTCGCAACATAGTATGCTCTCCCTTTTATAAGGTTCTTCTAGTAGACTTTTTTATGGCTGACCAACTAACTAGCCAGATTCCATTGCTTAGGCATTTGGAAAGTGCAGGTTGTCACATTTTTGCTAGAGCATTCAAAACACACCACCCTGATACCTGCCATTCTGGAAGATTATATATGGAAATAACTTACATCATCTCATTTTTACCATATTATTGGCGTGCTTTGCAGTGTGCAAGACGGTGGTTTGATGATGGTGATGTGAACCATTTGGCTAACATGGGAAAGTATGTCTCAGCAATGGTGGCAGCAGGGGCTAGAGTAACATACAGCAGGCAAAATGACAATCTATGGTTTGCTATAGTCTTAATCACTTCTGTGGTGGCCACAATGTATCAACTGTACTGGGATTTTATCAAGGACTGGGGATTTCTTAATCCAAAATCCATAAATCCATGGCTCAGAGATGATCTAATTCTAAAGAATAAAAGCATATACTATATGTCTATTGTCTTAAACATTGTCTTAAGAGTGACGTGGGTGGAGACTATCATGCACTTCAAAGTAGGGCCTGTTCAGTCACGACTACTAGACTTTTTATTAGCTGCACTTGAGGTTATTCGGAGAGGGCATTGGAATTTCTACAGGTTGGAAAATGAACATCTAAATAACGTTGGTCATTACCGGGCAGTGAAGACAGTTCCACTACCATTTCGAGAGATAGACTCTGACTGA
Predicted protein sequences of Glyma10g32670
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma10g32670.1 sequence type=predicted peptide gene model=Glyma10g32670 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVKFSKELEAQLIPEWKEAFVNYWQLKKQIKRIKLSRIPKQSHHHAKPDFGLSIFDSLSFFVKNIAQNFSASDHHDLNIIQVRKKTTKDDEEEIYETELAQLFSEEDEVRVFFMRLDEELNKVNQFYRRQESEFIERGETLNKQLQILLDLKQIISDCRRKNSPSKPYSTGVSPQYSPTRDSDYSENFGDSDETNSEISQTDEVITTLEKNGISFVNSVMRTKTKKGKPKMAMRIDVPATNPTRAITAITSMLWEDLVKNPTGDLVHKRKLQCAEKMIRGAFVELYKGFGLLKTYSSLNMVAFTKILKKFDKVSCQKASANYLKEVKRSHFVSSDKVFRLMDEVESIFTKHFANNDRKKAMKFLRPQQHKDSHMVTFLVGLSTGCFVSLFCVYAILAHLCGIFSSNNEPAYMETVYPVFSVFTLLSLHLFMYGCNLFMWKNTRINYNFIFEFSPSTALKHRDAFLMSTTLMTTVIGAMVIHLLLRAANFSPTEIDAIPGILLLFFVVLLICPFDLFYRPTRYCFIRVIRNIVCSPFYKVLLVDFFMADQLTSQIPLLRHLESAGCHIFARAFKTHHPDTCHSGRLYMEITYIISFLPYYWRALQCARRWFDDGDVNHLANMGKYVSAMVAAGARVTYSRQNDNLWFAIVLITSVVATMYQLYWDFIKDWGFLNPKSINPWLRDDLILKNKSIYYMSIVLNIVLRVTWVETIMHFKVGPVQSRLLDFLLAALEVIRRGHWNFYRLENEHLNNVGHYRAVKTVPLPFREIDSD*
>Glyma10g32670.2 sequence type=predicted peptide gene model=Glyma10g32670 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVKFSKELEAQLIPEWKEAFVNYWQLKKQIKRIKLSRIPKQSHHHAKPDFGLSIFDSLSFFVKNIAQNFSASDHHDLNIIQVRKKTTKDDEEEIYETELAQLFSEEDEVRVFFMRLDEELNKVNQFYRRQESEFIERGETLNKQLQILLDLKQIISDCRRKNSPSKPYSTGVSPQYSPTRDSDYSVCAENFGDSDETNSEISQTDEVITTLEKNGISFVNSVMRTKTKKGKPKMAMRIDVPATNPTRAITAITSMLWEDLVKNPTGDLVHKRKLQCAEKMIRGAFVELYKGFGLLKTYSSLNMVAFTKILKKFDKVSCQKASANYLKEVKRSHFVSSDKVFRLMDEVESIFTKHFANNDRKKAMKFLRPQQHKDSHMVTFLVGLSTGCFVSLFCVYAILAHLCGIFSSNNEPAYMETVYPVFSVFTLLSLHLFMYGCNLFMWKNTRINYNFIFEFSPSTALKHRDAFLMSTTLMTTVIGAMVIHLLLRAANFSPTEIDAIPGILLLFFVVLLICPFDLFYRPTRYCFIRVIRNIVCSPFYKVLLVDFFMADQLTSQIPLLRHLESAGCHIFARAFKTHHPDTCHSGRLYMEITYIISFLPYYWRALQCARRWFDDGDVNHLANMGKYVSAMVAAGARVTYSRQNDNLWFAIVLITSVVATMYQLYWDFIKDWGFLNPKSINPWLRDDLILKNKSIYYMSIVLNIVLRVTWVETIMHFKVGPVQSRLLDFLLAALEVIRRGHWNFYRLENEHLNNVGHYRAVKTVPLPFREIDSD*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
