Glyma10g27081 - SoyBase

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Report for Sequence Feature Glyma10g27081

Feature Type:	gene_model
Chromosome:	Gm10
Start:	35720562
stop:	35720810
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma10g27081

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G30370	AT	Annotation by Michelle Graham. TAIR10: allergen-related \| chr2:12940577-12942167 REVERSE LENGTH=156	SoyBase	E_val: 1.00E-26	ISS
GO:2000122	GO-bp	Annotation by Michelle Graham. GO Biological Process: negative regulation of stomatal complex development	SoyBase	N/A	ISS
GO:0005576	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: extracellular region	SoyBase	N/A	ISS
GO:0003674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: molecular function	SoyBase	N/A	ISS
UniRef100_G7K0R6	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: EPIDERMAL PATTERNING FACTOR-like protein n=1 Tax=Medicago truncatula RepID=G7K0R6_MEDTR	SoyBase	E_val: 5.00E-26	ISS
UniRef100_I1LAR1	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LAR1_SOYBN	SoyBase	E_val: 1.00E-41	ISS

Expression Patterns of Glyma10g27081

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma10g27081 not represented in the dataset	Glyma10g27081 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma10g27081 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.10g135000	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma10g27081

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma10g27081

Limit To All Plant Sequences

>Glyma10g27081.1   sequence type=CDS   gene model=Glyma10g27081   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGGTCTCATCAATGGGCTGGCACAAGAGGCTTCTAGGTGGGCCTGGGTCATTGCCGCCATGGTGCACCTCCAAGTGTGGCAAATGTACACCCTGCAGACCGGTTCATGTGCCGGTGCTGCTAGGGACGCTGGTTACTGCCGAGTACTACCCGGAGGCATGGAGATGCAAGTGTGGCAACAAGTTGTACATGCCATGA

Predicted protein sequences of Glyma10g27081

Limit To All Plant Sequences

>Glyma10g27081.1   sequence type=predicted peptide   gene model=Glyma10g27081   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEVSSMGWHKRLLGGPGSLPPWCTSKCGKCTPCRPVHVPVLLGTLVTAEYYPEAWRCKCGNKLYMP*

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