|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT4G00100 | AT | Annotation by Michelle Graham. TAIR10: ribosomal protein S13A | chr4:37172-38123 FORWARD LENGTH=151 | SoyBase | E_val: 1.00E-26 | ISS |
GO:0000911 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cytokinesis by cell plate formation | SoyBase | N/A | ISS |
GO:0001510 | GO-bp | Annotation by Michelle Graham. GO Biological Process: RNA methylation | SoyBase | N/A | ISS |
GO:0006412 | GO-bp | Annotation by Michelle Graham. GO Biological Process: translation | SoyBase | N/A | ISS |
GO:0009664 | GO-bp | Annotation by Michelle Graham. GO Biological Process: plant-type cell wall organization | SoyBase | N/A | ISS |
GO:0009965 | GO-bp | Annotation by Michelle Graham. GO Biological Process: leaf morphogenesis | SoyBase | N/A | ISS |
GO:0010090 | GO-bp | Annotation by Michelle Graham. GO Biological Process: trichome morphogenesis | SoyBase | N/A | ISS |
GO:0042545 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cell wall modification | SoyBase | N/A | ISS |
GO:0005622 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: intracellular | SoyBase | N/A | ISS |
GO:0005730 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleolus | SoyBase | N/A | ISS |
GO:0005783 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: endoplasmic reticulum | SoyBase | N/A | ISS |
GO:0005840 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: ribosome | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
GO:0022627 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytosolic small ribosomal subunit | SoyBase | N/A | ISS |
GO:0003735 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: structural constituent of ribosome | SoyBase | N/A | ISS |
PTHR11885 | Panther | RIBOSOMAL PROTEIN S15P/S13E | JGI | ISS | |
PF00312 | PFAM | Ribosomal protein S15 | JGI | ISS | |
UniRef100_G7JLB5 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: 40S ribosomal protein S13 n=1 Tax=Medicago truncatula RepID=G7JLB5_MEDTR | SoyBase | E_val: 1.00E-24 | ISS |
UniRef100_I1LAP4 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1LAP4_SOYBN | SoyBase | E_val: 1.00E-58 | ISS |
Glyma10g26630 not represented in the dataset |
Glyma10g26630 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma10g26630.1 sequence type=CDS gene model=Glyma10g26630 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GTGACCAACCCAAGTCTTGACTTTCTGTTAATGCTAAGGCTTGTTCACGCCATAATGGGTAGTTTGCATGTGCCTGAATTTCCAAAGGATATGTACCATTTGAATAAGAAGGCAGTTTCAATTAGGAAGCATCTTGAGAGGAACAAGAAGGACAAGGACTCCAAGTTCAGGTTGATTCTTGTTGACAACAGAATCCACCGACTTGCTCGCTACTACAAGAAGACTAAGAAGCTAAGCAGTAAGTTCCAAGATGGTCATATCAAATTTGCTAGAGACTAG
>Glyma10g26630.1 sequence type=predicted peptide gene model=Glyma10g26630 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high VTNPSLDFLLMLRLVHAIMGSLHVPEFPKDMYHLNKKAVSIRKHLERNKKDKDSKFRLILVDNRIHRLARYYKKTKKLSSKFQDGHIKFARD*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||