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Report for Sequence Feature Glyma10g23763

Feature Type:gene_model
Chromosome:Gm10
Start:30300905
stop:30303369
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma10g23763
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G17680AT Annotation by Michelle Graham. TAIR10: disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD LENGTH=1294 SoyBaseE_val: 4.00E-68ISS
GO:0006952GO-bp Annotation by Michelle Graham. GO Biological Process: defense response SoyBaseN/AISS
GO:0007165GO-bp Annotation by Michelle Graham. GO Biological Process: signal transduction SoyBaseN/AISS
GO:0005622GO-cc Annotation by Michelle Graham. GO Cellular Compartment: intracellular SoyBaseN/AISS
GO:0043531GO-mf Annotation by Michelle Graham. GO Molecular Function: ADP binding SoyBaseN/AISS
PTHR11017Panther LEUCINE RICH REPEAT PROTEIN JGI ISS
PTHR11017:SF20Panther DISEASE RESISTANCE PROTEIN JGI ISS
PF00931PFAM NB-ARC domain JGI ISS
PF01582PFAM TIR domain JGI ISS
UniRef100_C6ZS29UniRef Annotation by Michelle Graham. Most informative UniRef hit: TIR-NBS-LRR type disease resistance protein n=1 Tax=Glycine max RepID=C6ZS29_SOYBN SoyBaseE_val: 3.00E-147ISS
UniRef100_UPI0002339429UniRef Annotation by Michelle Graham. Best UniRef hit: UPI0002339429 related cluster n=1 Tax=unknown RepID=UPI0002339429 SoyBaseE_val: 0ISS

Expression Patterns of Glyma10g23763
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma10g23763 not represented in the dataset
Glyma10g23763 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma10g23763 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma10g23763
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma10g23763
>Glyma10g23763.1   sequence type=CDS   gene model=Glyma10g23763   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTCTTTGTTAGCTTTTGTGGTGGAGACACACGCTTCAATTAACATAATTGGTTCTCTTTTTTGGGCTCTCTGTAAAAATGGTATTCATGCCTTCAAAGATGACACACATCTTAAGAAATACGAATCCATAGCACCCAAGTTGCAACAAGCCATTGAGGGGTCTCGCCTTTTTGTTGTGGTCTTCTCAAAGAATTATGCTTCCTCAACTTGGTGCTTAAGTGAACTTGCACACATCGGCAACTTCGTTGAAATGTCGCCAAGACTTGTTTTGCTTATTTTTTATGATGTTGATCCATTAGAGGTGCGAAAATATAGTGAATGTCATGGGATGGCCTTTGCTGAACACGAAAAAAGATTAAGAGAAGACACAAAGAAGATGGAGGAAGTACAAAGATGGAGGGCATCTCTCACACGAGTGGCCAATCTCTCTGAGTTGAGAGAGGTAACATGCAAATTAGGTCCAAATTTATACATTATATTGACTGCCAAATTTTCAAGTCTTAATGATCATCTAGTTGGGATGGAATCTTGTGTTGAAGAATTAAGAAGGCTTTTATGTTTGGAGTCAGTTAATGATCTTCAAGTTATTGGAATTGGAATACGTGGAATGGGTGGAATAGGAAAGACGACTCTTGCTCATGTTTTATATGAAAGAATCTCTCATCAATATGATTTTCATTGTTATATTGTTGATGTAAGCAAAATTTATCAAGATTCTAATATATTAGGGGTACAAAAACAACTACTTTCTAATTATTTGAATGGTAAAAATCTAGAGATTTGTGATGTTTATGAGGCAACAACAGTTACAGTTTTTGATATCGATCAAGTTGAACAATTAAATATGTTTATTGGGAGTGGTAAAACACTATTACGTCAATGCCTAAGTGGAGTGAGCATAATCATCATAATTTATAGGGATCAACACATAGTGAAGACACTTGGAGTCAGTGCAATTTACCTAGTCCAACTATTGAATCGCGAAGATTCTATTCAATTGTTTTGCCAAAATGATTTCAAACTTAATTATACTCAGAGTGATTATTTAGTGTTGACATATGGTGTACTATCACATGCTCAAGGCAATCCATTGCCCATTGAAGTATTGAGACCATCTTTGTTTGGCCAAAATTTCTCACAATGGGGAAGTGCATTGGCTAGGCTAAGAAAAAATAATAGTAAAAGTATTATGGATGTGTTGCGAACAAGTTTTGATGTGCTGGATAACACAGAAAAGGAAATATTTCTAAATATTGTTTGCTACTTCAACAATTATAAAGAGCAATATGTGAAGAAAATTCTAAATTTTCACGGATTTCATCTTGAATATGGTCTACAAGTTCTTATTGATAAATCACTCATAACAATCAGGGAGAGGTGGATTGTGATGGATCTCTTATTGATAAATTTGGGCAGGTGTATTGTTCAAGAAGAATTAGCCCTAGGAAAGTGGACTAGGTTGTGGGATTACCTAGATCTATACAAAGTCATGTTTGAGGATATGCCAAACAAACTTGTTGAGTTATTTCTGCCTAATAGCAACATCGATCAACTATGGAAAGGCAAAAAGGTAATATGTGTCAATCTCTCTTACTCCAAAAATCTAATTGAGACACCAAATTTTGAAGAGGCCCTAAACCTTGAGCAACTAAACCTTGATGGATGT
Predicted protein sequences of Glyma10g23763
>Glyma10g23763.1   sequence type=predicted peptide   gene model=Glyma10g23763   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSLLAFVVETHASINIIGSLFWALCKNGIHAFKDDTHLKKYESIAPKLQQAIEGSRLFVVVFSKNYASSTWCLSELAHIGNFVEMSPRLVLLIFYDVDPLEVRKYSECHGMAFAEHEKRLREDTKKMEEVQRWRASLTRVANLSELREVTCKLGPNLYIILTAKFSSLNDHLVGMESCVEELRRLLCLESVNDLQVIGIGIRGMGGIGKTTLAHVLYERISHQYDFHCYIVDVSKIYQDSNILGVQKQLLSNYLNGKNLEICDVYEATTVTVFDIDQVEQLNMFIGSGKTLLRQCLSGVSIIIIIYRDQHIVKTLGVSAIYLVQLLNREDSIQLFCQNDFKLNYTQSDYLVLTYGVLSHAQGNPLPIEVLRPSLFGQNFSQWGSALARLRKNNSKSIMDVLRTSFDVLDNTEKEIFLNIVCYFNNYKEQYVKKILNFHGFHLEYGLQVLIDKSLITIRERWIVMDLLLINLGRCIVQEELALGKWTRLWDYLDLYKVMFEDMPNKLVELFLPNSNIDQLWKGKKVICVNLSYSKNLIETPNFEEALNLEQLNLDGC






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