Glyma10g22150 - SoyBase

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Report for Sequence Feature Glyma10g22150

Feature Type:	gene_model
Chromosome:	Gm10
Start:	28121898
stop:	28147333
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma10g22150

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G13610	AT	Annotation by Michelle Graham. TAIR10: Protein of unknown function (DUF155) \| chr5:4383073-4384808 FORWARD LENGTH=402	SoyBase	E_val: 1.00E-153	ISS
GO:0008150	GO-bp	Annotation by Michelle Graham. GO Biological Process: biological process	SoyBase	N/A	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0005739	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion	SoyBase	N/A	ISS
GO:0003674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: molecular function	SoyBase	N/A	ISS
KOG2861	KOG	Uncharacterized conserved protein	JGI		ISS
PTHR16255	Panther	UNCHARACTERIZED	JGI		ISS
PF02582	PFAM	Uncharacterised ACR, YagE family COG1723	JGI		ISS
UniRef100_I1LAC8	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1LAC8_SOYBN	SoyBase	E_val: 0	ISS
UniRef100_Q9FNB2	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: AT5g13610/MSH12_7 n=1 Tax=Arabidopsis thaliana RepID=Q9FNB2_ARATH	SoyBase	E_val: 6.00E-151	ISS

Expression Patterns of Glyma10g22150

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma10g22150 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.10g116500	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma10g22150

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma10g22150

Limit To All Plant Sequences

>Glyma10g22150.4   sequence type=transcript   gene model=Glyma10g22150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AAAAAAAAACAAACGAGGGTTAATTGCAAAGGAATAGCCTCATTCTGTCCGTGTCTGCATCCGAAACCAAAACAGATGTGGCGCACCACTTTAGACAGCAGCACCATGAGAGCCCTGCGCCTTCGTTCCTTCCTCTTCTCTTCATCTTCTTCCTCTTCCTCTTCTTGTTGTTCACTCATCAACATTTTCTGCCCATCCTCCTCCTCCTCTTCGTTTACGACTTTGACTACAATCATCTCTCACTCTTTTCTTCCTTTTCCCCCAACGACGCGCGTCTTGTTCACCGACTCGCGCCGCTTCGGCTCCCCCGTTCCGCGCCGCTTCGGCTCCCCCGTTCCGCGCTGCGTTTCGTCCCTCCCCACCCTCGACTGGAACGACGCCGTTTCCTGCTCTGAGGTCGAGGTTGACGCCAATGCCGCCGACGGCGGCGATGACGGAGCCGTCGACCAAGACACAAAGCCTTCTATTGCCGTCAGAGCCTTCTTCTTCTCTACTAGTGTTGATTTAAAAAGCTTGGTGGAACAGAACAAAGCAAACTTTGTCCCGCCATCATCACGCATGACTAATTATGTAGTTCTCAAGTTTGGAGATATTTGTGTTTCCAAGGGTCCAGGTACTTTCTTGAGTGGACGCAATGGCTGTTACATGGTGGTTTTTCAGTATGGTTCCATTGTATTGTTTAATGTCCCTGAGCATGAGGTTGATGCTTATTTGAAAATTGTTAAGAAGCATGCATCTGGTCTGCTTCCTGAAATGAGAAAGGATGAGTATGAAGTTAGAGAAAAACCAGCTTTAAGCACATGGATGCAAGGTGGACTAGATTACATAATGTTACAATACTTGAACATCGACGGCATTCGAACTATTGGTAGTGTTCTAGGTCAAAGTATTGCTCTTGATTACTATGGTCGGCAGGTTGATGGAATGGTTGCAGAATTTACAGACATAAACCGAGAGATGGAAGCAACTGGAAAATTCAAAATGCAAAGGAAGAAACTTTTCCAGTTGGTGGGCAAGGCAAATTCAAATCTTGCTGATGTGATTCTAAAGCTTGGACTATTTGAGAGATCAGATATTGCTTGGAAAGATGCCAAATATGCTCAGATATGGGAATATCTCAGGGATGAATTTGAATTAACTCAGAGATTTGCTAGTCTTGATTTCAAGTTGAAATTTGTGGAGCATAACATCCGTTTTCTACAAGAAATTCTTCAAAATAGGAAATCTGATTTCCTAGAGTGGCTCATTATTGCATTGATTGGTGCTGAAATTCTTCTGTCTCTCTATGACATTGTTCATCGGTCTGCCATGAAATTTTAGCAGCATTTTTTCTGGTGGCATGTAAGGTTAGCATGCCATTGAAGAGCTGTAGCATACTAGTAGTTGGCTTTACTCATTTAGTTTTTAGATATTGGTTTCTCATGCAATAATTCATTGTGTCTCTTGTAAATAACAATTTTAAAGCCTTAAACCCAGTTCTTTACTAGTCAATAGTATAACTTTACATGTGTAGGATAGTATCACTCACTGAAAACCTGCACCTGTATGCTTTGTTGTATTATAATTGTCTATTGCATCGATTTATTATTCTGTTGAATTTTGTGAATGCAGGAAGTTGCCAATTTTCATGACCAGGGTTATTCAATAAAATGATATCTTTATTGCCAATACCTGTAGTCCAAAAAGCTAATATTGCCCTGGATTTGAAGAATTGAGGATTATTGTGGTGCTGATCTAAGTCTGGGAATGTTG

>Glyma10g22150.5   sequence type=transcript   gene model=Glyma10g22150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AAAAAAAAACAAACGAGGGTTAATTGCAAAGGAATAGCCTCATTCTGTCCGTGTCTGCATCCGAAACCAAAACAGATGTGGCGCACCACTTTAGACAGCAGCACCATGAGAGCCCTGCGCCTTCGTTCCTTCCTCTTCTCTTCATCTTCTTCCTCTTCCTCTTCTTGTTGTTCACTCATCAACATTTTCTGCCCATCCTCCTCCTCCTCTTCGTTTACGACTTTGACTACAATCATCTCTCACTCTTTTCTTCCTTTTCCCCCAACGACGCGCGTCTTGTTCACCGACTCGCGCCGCTTCGGCTCCCCCGTTCCGCGCCGCTTCGGCTCCCCCGTTCCGCGCTGCGTTTCGTCCCTCCCCACCCTCGACTGGAACGACGCCGTTTCCTGCTCTGAGGTCGAGGTTGACGCCAATGCCGCCGACGGCGGCGATGACGGAGCCGTCGACCAAGACACAAAGCCTTCTATTGCCGTCAGAGCCTTCTTCTTCTCTACTAGTGTTGATTTAAAAAGCTTGGTGGAACAGAACAAAGCAAACTTTGTCCCGCCATCATCACGCATGACTAATTATGTAGTTCTCAAGTTTGGAGATATTTGTGTTTCCAAGGGTCCAGGTACTTTCTTGAGTGGACGCAATGGCTGTTACATGGTGGTTTTTCAGTATGGTTCCATTGTATTGTTTAATGTCCCTGAGCATGAGGTTGATGCTTATTTGAAAATTGTTAAGAAGCATGCATCTGGTCTGCTTCCTGAAATGAGAAAGGATGAGTATGAAGTTAGAGAAAAACCAGCTTTAAGCACATGGATGCAAGGTGGACTAGATTACATAATGTTACAATACTTGAACATCGACGGCATTCGAACTATTGGTAGTGTTCTAGGTCAAAGTATTGCTCTTGATTACTATGGTCGGCAGGTTGATGGAATGGTTGCAGAATTTACAGACATAAACCGAGAGATGGAAGCAACTGGAAAATTCAAAATGCAAAGGAAGAAACTTTTCCAGTTGGTGGGCAAGGCAAATTCAAATCTTGCTGATGTGATTCTAAAGCTTGGACTATTTGAGAGATCAGATATTGCTTGGAAAGATGCCAAATATGCTCAGATATGGGAATATCTCAGGGATGAATTTGAATTAACTCAGAGATTTGCTAGTCTTGATTTCAAGTTGAAATTTGTGGAGCATAACATCCGTTTTCTACAAGAAATTCTTCAAAATAGGAAATCTGATTTCCTAGAGTGGCTCATTATTGCATTGATTGGTGCTGAAATTCTTCTGTCTCTCTATGACATTGTTCATCGGTCTGCCATGAAATTTTAGCAGCATTTTTTCTGGTGGCATGTAAGGAAGTTGCCAATTTTCATGACCAGGGTTATTCAATAAAATGATATCTTTATTGCCAATACCTGTAGTCCAAAAAGCTAATATTGCCCTGGATTTGAAGAATTGAGGATTATTGTGGTGCTGATCTAAGTCTGGGAATGTTG

Coding sequences of Glyma10g22150

Limit To All Plant Sequences

>Glyma10g22150.3   sequence type=CDS   gene model=Glyma10g22150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AAAAAAAAACAAACGAGGGTTAATTGCAAAGGAATAGCCTCATTCTGTCCGTGTCTGCATCCGAAACCAAAACAGATGTGGCGCACCACTTTAGACAGCAGCACCATGAGAGCCCTGCGCCTTCGTTCCTTCCTCTTCTCTTCATCTTCTTCCTCTTCCTCTTCTTGTTGTTCACTCATCAACATTTTCTGCCCATCCTCCTCCTCCTCTTCGTTTACGACTTTGACTACAATCATCTCTCACTCTTTTCTTCCTTTTCCCCCAACGACGCGCGTCTTGTTCACCGACTCGCGCCGCTTCGGCTCCCCCGTTCCGCGCCGCTTCGGCTCCCCCGTTCCGCGCTGCGTTTCGTCCCTCCCCACCCTCGACTGGAACGACGCCGTTTCCTGCTCTGAGGTCGAGGTTGACGCCAATGCCGCCGACGGCGGCGATGACGGAGCCGTCGACCAAGACACAAAGCCTTCTATTGCCGTCAGAGCCTTCTTCTTCTCTACTAGTGTTGATTTAAAAAGCTTGGTGGAACAGAACAAAGCAAACTTTGTCCCGCCATCATCACGCATGACTAATTATGTAGTTCTCAAGTTTGGAGATATTTGTGTTTCCAAGGGTCCAGGTACTTTCTTGAGTGGACGCAATGGCTGTTACATGGTGGTTTTTCAGTATGGTTCCATTGTATTGTTTAATGTCCCTGAGCATGAGGTTGATGCTTATTTGAAAATTGTTAAGAAGCATGCATCTGGTCTGCTTCCTGAAATGAGAAAGGATGAGTATGAAGTTAGAGAAAAACCAGCTTTAAGCACATGGATGCAAGGTGGACTAGATTACATAATGTTACAATACTTGAACATCGACGGCATTCGAACTATTGGTAGTGTTCTAGGTCAAAGTATTGCTCTTGATTACTATGGTCGGCAGGTTGATGGAATGGTTGCAGAATTTACAGACATAAACCGAGAGATGGAAGCAACTGGAAAATTCAAAATGCAAAGGAAGAAACTTTTCCAGTTGGTGGGCAAGGCAAATTCAAATCTTGCTGATGTGATTCTAAAGCTTGGACTATTTGAGAGATCAGATATTGCTTGGAAAGATGCCAAATATGCTCAGATATGGGAATATCTCAGGGATGAATTTGAATTAACTCAGAGATTTGCTAGTCTTGATTTCAAGTTGAAATTTGTGGAGCATAACATCCGTTTTCTACAAGAAATTCTTCAAAATAGGAAATCTGATTTCCTAGAGTGGCTCATTATTGCATTGATTGGTGCTGAAATTCTTCTGTCTCTCTATGACATTGTTCATCGGTCTGCCATGAAATTTTAG

>Glyma10g22150.4   sequence type=CDS   gene model=Glyma10g22150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AAAAAAAAACAAACGAGGGTTAATTGCAAAGGAATAGCCTCATTCTGTCCGTGTCTGCATCCGAAACCAAAACAGATGTGGCGCACCACTTTAGACAGCAGCACCATGAGAGCCCTGCGCCTTCGTTCCTTCCTCTTCTCTTCATCTTCTTCCTCTTCCTCTTCTTGTTGTTCACTCATCAACATTTTCTGCCCATCCTCCTCCTCCTCTTCGTTTACGACTTTGACTACAATCATCTCTCACTCTTTTCTTCCTTTTCCCCCAACGACGCGCGTCTTGTTCACCGACTCGCGCCGCTTCGGCTCCCCCGTTCCGCGCCGCTTCGGCTCCCCCGTTCCGCGCTGCGTTTCGTCCCTCCCCACCCTCGACTGGAACGACGCCGTTTCCTGCTCTGAGGTCGAGGTTGACGCCAATGCCGCCGACGGCGGCGATGACGGAGCCGTCGACCAAGACACAAAGCCTTCTATTGCCGTCAGAGCCTTCTTCTTCTCTACTAGTGTTGATTTAAAAAGCTTGGTGGAACAGAACAAAGCAAACTTTGTCCCGCCATCATCACGCATGACTAATTATGTAGTTCTCAAGTTTGGAGATATTTGTGTTTCCAAGGGTCCAGGTACTTTCTTGAGTGGACGCAATGGCTGTTACATGGTGGTTTTTCAGTATGGTTCCATTGTATTGTTTAATGTCCCTGAGCATGAGGTTGATGCTTATTTGAAAATTGTTAAGAAGCATGCATCTGGTCTGCTTCCTGAAATGAGAAAGGATGAGTATGAAGTTAGAGAAAAACCAGCTTTAAGCACATGGATGCAAGGTGGACTAGATTACATAATGTTACAATACTTGAACATCGACGGCATTCGAACTATTGGTAGTGTTCTAGGTCAAAGTATTGCTCTTGATTACTATGGTCGGCAGGTTGATGGAATGGTTGCAGAATTTACAGACATAAACCGAGAGATGGAAGCAACTGGAAAATTCAAAATGCAAAGGAAGAAACTTTTCCAGTTGGTGGGCAAGGCAAATTCAAATCTTGCTGATGTGATTCTAAAGCTTGGACTATTTGAGAGATCAGATATTGCTTGGAAAGATGCCAAATATGCTCAGATATGGGAATATCTCAGGGATGAATTTGAATTAACTCAGAGATTTGCTAGTCTTGATTTCAAGTTGAAATTTGTGGAGCATAACATCCGTTTTCTACAAGAAATTCTTCAAAATAGGAAATCTGATTTCCTAGAGTGGCTCATTATTGCATTGATTGGTGCTGAAATTCTTCTGTCTCTCTATGACATTGTTCATCGGTCTGCCATGAAATTTTAG

>Glyma10g22150.5   sequence type=CDS   gene model=Glyma10g22150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AAAAAAAAACAAACGAGGGTTAATTGCAAAGGAATAGCCTCATTCTGTCCGTGTCTGCATCCGAAACCAAAACAGATGTGGCGCACCACTTTAGACAGCAGCACCATGAGAGCCCTGCGCCTTCGTTCCTTCCTCTTCTCTTCATCTTCTTCCTCTTCCTCTTCTTGTTGTTCACTCATCAACATTTTCTGCCCATCCTCCTCCTCCTCTTCGTTTACGACTTTGACTACAATCATCTCTCACTCTTTTCTTCCTTTTCCCCCAACGACGCGCGTCTTGTTCACCGACTCGCGCCGCTTCGGCTCCCCCGTTCCGCGCCGCTTCGGCTCCCCCGTTCCGCGCTGCGTTTCGTCCCTCCCCACCCTCGACTGGAACGACGCCGTTTCCTGCTCTGAGGTCGAGGTTGACGCCAATGCCGCCGACGGCGGCGATGACGGAGCCGTCGACCAAGACACAAAGCCTTCTATTGCCGTCAGAGCCTTCTTCTTCTCTACTAGTGTTGATTTAAAAAGCTTGGTGGAACAGAACAAAGCAAACTTTGTCCCGCCATCATCACGCATGACTAATTATGTAGTTCTCAAGTTTGGAGATATTTGTGTTTCCAAGGGTCCAGGTACTTTCTTGAGTGGACGCAATGGCTGTTACATGGTGGTTTTTCAGTATGGTTCCATTGTATTGTTTAATGTCCCTGAGCATGAGGTTGATGCTTATTTGAAAATTGTTAAGAAGCATGCATCTGGTCTGCTTCCTGAAATGAGAAAGGATGAGTATGAAGTTAGAGAAAAACCAGCTTTAAGCACATGGATGCAAGGTGGACTAGATTACATAATGTTACAATACTTGAACATCGACGGCATTCGAACTATTGGTAGTGTTCTAGGTCAAAGTATTGCTCTTGATTACTATGGTCGGCAGGTTGATGGAATGGTTGCAGAATTTACAGACATAAACCGAGAGATGGAAGCAACTGGAAAATTCAAAATGCAAAGGAAGAAACTTTTCCAGTTGGTGGGCAAGGCAAATTCAAATCTTGCTGATGTGATTCTAAAGCTTGGACTATTTGAGAGATCAGATATTGCTTGGAAAGATGCCAAATATGCTCAGATATGGGAATATCTCAGGGATGAATTTGAATTAACTCAGAGATTTGCTAGTCTTGATTTCAAGTTGAAATTTGTGGAGCATAACATCCGTTTTCTACAAGAAATTCTTCAAAATAGGAAATCTGATTTCCTAGAGTGGCTCATTATTGCATTGATTGGTGCTGAAATTCTTCTGTCTCTCTATGACATTGTTCATCGGTCTGCCATGAAATTTTAG

Predicted protein sequences of Glyma10g22150

Limit To All Plant Sequences

>Glyma10g22150.3   sequence type=predicted peptide   gene model=Glyma10g22150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
KKKQTRVNCKGIASFCPCLHPKPKQMWRTTLDSSTMRALRLRSFLFSSSSSSSSSCCSLINIFCPSSSSSSFTTLTTIISHSFLPFPPTTRVLFTDSRRFGSPVPRRFGSPVPRCVSSLPTLDWNDAVSCSEVEVDANAADGGDDGAVDQDTKPSIAVRAFFFSTSVDLKSLVEQNKANFVPPSSRMTNYVVLKFGDICVSKGPGTFLSGRNGCYMVVFQYGSIVLFNVPEHEVDAYLKIVKKHASGLLPEMRKDEYEVREKPALSTWMQGGLDYIMLQYLNIDGIRTIGSVLGQSIALDYYGRQVDGMVAEFTDINREMEATGKFKMQRKKLFQLVGKANSNLADVILKLGLFERSDIAWKDAKYAQIWEYLRDEFELTQRFASLDFKLKFVEHNIRFLQEILQNRKSDFLEWLIIALIGAEILLSLYDIVHRSAMKF*

>Glyma10g22150.4   sequence type=predicted peptide   gene model=Glyma10g22150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
KKKQTRVNCKGIASFCPCLHPKPKQMWRTTLDSSTMRALRLRSFLFSSSSSSSSSCCSLINIFCPSSSSSSFTTLTTIISHSFLPFPPTTRVLFTDSRRFGSPVPRRFGSPVPRCVSSLPTLDWNDAVSCSEVEVDANAADGGDDGAVDQDTKPSIAVRAFFFSTSVDLKSLVEQNKANFVPPSSRMTNYVVLKFGDICVSKGPGTFLSGRNGCYMVVFQYGSIVLFNVPEHEVDAYLKIVKKHASGLLPEMRKDEYEVREKPALSTWMQGGLDYIMLQYLNIDGIRTIGSVLGQSIALDYYGRQVDGMVAEFTDINREMEATGKFKMQRKKLFQLVGKANSNLADVILKLGLFERSDIAWKDAKYAQIWEYLRDEFELTQRFASLDFKLKFVEHNIRFLQEILQNRKSDFLEWLIIALIGAEILLSLYDIVHRSAMKF*

>Glyma10g22150.5   sequence type=predicted peptide   gene model=Glyma10g22150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
KKKQTRVNCKGIASFCPCLHPKPKQMWRTTLDSSTMRALRLRSFLFSSSSSSSSSCCSLINIFCPSSSSSSFTTLTTIISHSFLPFPPTTRVLFTDSRRFGSPVPRRFGSPVPRCVSSLPTLDWNDAVSCSEVEVDANAADGGDDGAVDQDTKPSIAVRAFFFSTSVDLKSLVEQNKANFVPPSSRMTNYVVLKFGDICVSKGPGTFLSGRNGCYMVVFQYGSIVLFNVPEHEVDAYLKIVKKHASGLLPEMRKDEYEVREKPALSTWMQGGLDYIMLQYLNIDGIRTIGSVLGQSIALDYYGRQVDGMVAEFTDINREMEATGKFKMQRKKLFQLVGKANSNLADVILKLGLFERSDIAWKDAKYAQIWEYLRDEFELTQRFASLDFKLKFVEHNIRFLQEILQNRKSDFLEWLIIALIGAEILLSLYDIVHRSAMKF*

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