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Report for Sequence Feature Glyma10g20918

Feature Type:gene_model
Chromosome:Gm10
Start:26487647
stop:26490753
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma10g20918
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G38260AT Annotation by Michelle Graham. TAIR10: Protein kinase superfamily protein | chr5:15283692-15285837 REVERSE LENGTH=638 SoyBaseE_val: 4.00E-126ISS
GO:0006468GO-bp Annotation by Michelle Graham. GO Biological Process: protein phosphorylation SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0004672GO-mf Annotation by Michelle Graham. GO Molecular Function: protein kinase activity SoyBaseN/AISS
GO:0004674GO-mf Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity SoyBaseN/AISS
GO:0005524GO-mf Annotation by Michelle Graham. GO Molecular Function: ATP binding SoyBaseN/AISS
GO:0016301GO-mf Annotation by Michelle Graham. GO Molecular Function: kinase activity SoyBaseN/AISS
GO:0016772GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups SoyBaseN/AISS
KOG1187 KOG Serine/threonine protein kinase JGI ISS
PTHR24420Panther FAMILY NOT NAMED JGI ISS
PTHR24420:SF441Panther SUBFAMILY NOT NAMED JGI ISS
PF00069PFAM Protein kinase domain JGI ISS
UniRef100_G7IC90UniRef Annotation by Michelle Graham. Most informative UniRef hit: Protein kinase-coding resistance protein n=1 Tax=Medicago truncatula RepID=G7IC90_MEDTR SoyBaseE_val: 0ISS
UniRef100_I1LAA4UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1LAA4_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma10g20918
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma10g20918 not represented in the dataset
Glyma10g20918 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma10g20918 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.10g098400 Wm82.a2.v1IGC As supplied by JGI

References for Glyma10g20918
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Transcripts of Glyma10g20918
>Glyma10g20918.2   sequence type=transcript   gene model=Glyma10g20918   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AGGTTTTGATAGTATGTTATATTCTAATCAAATCACAAACTGCAAAATAACAAAGTAAATCACAACAGAGAATTGTGATGAAGAACCATGCATTTGGCGCCCTCTTTCTCTCTACCCTTGTTCTTCTTGTCTCTACTGCAAAGGGTAAGTGTCCACCCTCCTTTGTTTGTGGGAACCTCGGCACCATGCACTTCCCTTACACTGACACAAAACACCCTCACTGTGGCCTGTTGGTGATCTATGGCTGCGATGACCGCGACAATGATACCATTAAAACCATTAAGAACAACGGAGCATGGTTTTACATCACACGCGATCAGAACAACGGTACCATTTTGTTCAGAGATGACAAACTCCGCACACTCTTGCTAACCAGACGATGTGGAGTCTTCAGCAACAACTACACCAGTTTGGACACCACTTCTCCTTTCCTTTCACTTCACTTCATGAATCTCAATCTATTCATATGCAACAGCACTCTCAATGTCACCCCTCCTTCTTCAGTCTTTTCCAAATCTACCATATGCAAGGATGAGGACATCTTCTATCGCCCGACTAATATGGATGATTATTATGATTATCATTATCCTTATTTTGAAGCATGTTCGAGGGTTATACTTCCAATCAGAGATTCAGAGATTGTACCTGACAATGGAAACCTCTTTGACTATCTATCAGCTGATATTCCTGTCCAAGCAGAGGTGTTTCATGATTGTTCTTCTTGTTACTATCTTAGAGGAGGCCGGTGTCAACTTGACAACCAAGGGAAGTTCTTCTGTGCTGAAGCTACTTCAGTTGCTGGAGGACTGGGAATTTTGATGGTCTTGGCTTGCATCTTACGAAGATACTATTTTCACAAGAAGAATCCTACTTACCTAATGATTGAGAACTTTCTGAAGCAACATGGACACCTTTCAGCCAAAAGGTACAGTTATTTGGAGGTAAAGAAAATGACTAACTCCTTCAAAAACAAATTAGGCCAAGGAGGGTATGGCAGTGTATATAAAGGGAGGTTACAAAATGGAAGCCTTGTGGCAGTGAAGATTTTAAGCAAGTTAAAAGGTGATGGAGATGAATTCATCAATGAAGTGGCTAGTATTAGCATGACTTCTCATGTTAACATTGTCAGTTTACTGGGATTTTGCCTGGAGGGCTCCAAAAGAGTTCTCATATACGAGTATATGCCAAATGGATCTCTTGAAAAGTTCATATATGAAGAGAAAGATCCTTTAAAGCATAAACTCACATTGAATTGCAGAACTATGTACAATATCGTCATTGGTGTTGCTCGAGGATTGGAGTACTTGCACAAGGGTTGTAACACCAAAATCTTGCATTTTGACATAAAACCTCACAACATACTGCTTGATGAGTTGTTTTGCCCAAAAATATCAGATTTTGGGCTTGCTAAAATATGTCCTAGAGAAAAAAGTATTGTATCAATGATGGTTGCAAGGGGAACTGTAGGGTATATTGCTCCTGAATTGTTCTGCAGAAATTTTGGTGGAGTGTCCCATAAATCAGATGTCTACAGTTATGGAATGATGGTCTTGGAAATGCTTGGTGCTAGAGAGAATAATAATAGCAGAGTTGATTTTTCAAGTGAAAATTACTTTCCACATTGGATATACAGCCATCTTGAATTAAATCAAGAGCTTCAATTGCGCTGTATTAAAAAACAAAATGATAAAGAAATGGTGAGAAAAATGACTATAGTGAGTTTATGGTGCATACAAACTGACCCTTCAAAACGACCTGCAATGAGTAAAGTGGTGGAAATGATGGAAGGAAGCATTAGCTTGTTGCAAGTTCCACCCAAACCTTTCCTTTTTTCGTCCTCAGCCCCTGAATCACAATCAAGCGAGACTTATAGTTATTGACATTGTTGTATGTTGGTTCATTAACAATCATTAGTTAGTTCTTTTACTCTTTACCAACTTAGTATTTTTCTATTTTCTGTTATTTTGATATAGCATGTAACAGTTAATTAGTTTTAAGTTAGTTGGGTTAGTTAGGCTTGAAATAGTGCTTCTATTTCTTCTTCTTGCATAGCCTAGATCATAAGAGAATTTTTTACTTAGAAAAATTCTGCAAAGATCGAATAAAGTGGTTGCTGTGAGCACAGTGCAGTTTTTCGTTC
Coding sequences of Glyma10g20918
>Glyma10g20918.1   sequence type=CDS   gene model=Glyma10g20918   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAGAACCATGCATTTGGCGCCCTCTTTCTCTCTACCCTTGTTCTTCTTGTCTCTACTGCAAAGGGTAAGTGTCCACCCTCCTTTGTTTGTGGGAACCTCGGCACCATGCACTTCCCTTACACTGACACAAAACACCCTCACTGTGGCCTGTTGGTGATCTATGGCTGCGATGACCGCGACAATGATACCATTAAAACCATTAAGAACAACGGAGCATGGTTTTACATCACACGCGATCAGAACAACGGTACCATTTTGTTCAGAGATGACAAACTCCGCACACTCTTGCTAACCAGACGATGTGGAGTCTTCAGCAACAACTACACCAGTTTGGACACCACTTCTCCTTTCCTTTCACTTCACTTCATGAATCTCAATCTATTCATATGCAACAGCACTCTCAATGTCACCCCTCCTTCTTCAGTCTTTTCCAAATCTACCATATGCAAGGATGAGGACATCTTCTATCGCCCGACTAATATGGATGATTATTATGATTATCATTATCCTTATTTTGAAGCATGTTCGAGGGTTATACTTCCAATCAGAGATTCAGAGATTGTACCTGACAATGGAAACCTCTTTGACTATCTATCAGCTGATATTCCTGTCCAAGCAGAGGTGTTTCATGATTGTTCTTCTTGTTACTATCTTAGAGGAGGCCGGTGTCAACTTGACAACCAAGGGAAGTTCTTCTGTGCTGAAGAGAAAACTAGTAAGAAGGAGAAGATAGTGGTAGCAGCTACTTCAGTTGCTGGAGGACTGGGAATTTTGATGGTCTTGGCTTGCATCTTACGAAGATACTATTTTCACAAGAAGAATCCTACTTACCTAATGATTGAGAACTTTCTGAAGCAACATGGACACCTTTCAGCCAAAAGGTACAGTTATTTGGAGGTAAAGAAAATGACTAACTCCTTCAAAAACAAATTAGGCCAAGGAGGGTATGGCAGTGTATATAAAGGGAGGTTACAAAATGGAAGCCTTGTGGCAGTGAAGATTTTAAGCAAGTTAAAAGGTGATGGAGATGAATTCATCAATGAAGTGGCTAGTATTAGCATGACTTCTCATGTTAACATTGTCAGTTTACTGGGATTTTGCCTGGAGGGCTCCAAAAGAGTTCTCATATACGAGTATATGCCAAATGGATCTCTTGAAAAGTTCATATATGAAGAGAAAGATCCTTTAAAGCATAAACTCACATTGAATTGCAGAACTATGTACAATATCGTCATTGGTGTTGCTCGAGGATTGGAGTACTTGCACAAGGGTTGTAACACCAAAATCTTGCATTTTGACATAAAACCTCACAACATACTGCTTGATGAGTTGTTTTGCCCAAAAATATCAGATTTTGGGCTTGCTAAAATATGTCCTAGAGAAAAAAGTATTGTATCAATGATGGTTGCAAGGGGAACTGTAGGGTATATTGCTCCTGAATTGTTCTGCAGAAATTTTGGTGGAGTGTCCCATAAATCAGATGTCTACAGTTATGGAATGATGGTCTTGGAAATGCTTGGTGCTAGAGAGAATAATAATAGCAGAGTTGATTTTTCAAGTGAAAATTACTTTCCACATTGGATATACAGCCATCTTGAATTAAATCAAGAGCTTCAATTGCGCTGTATTAAAAAACAAAATGATAAAGAAATGGTGAGAAAAATGACTATAGTGAGTTTATGGTGCATACAAACTGACCCTTCAAAACGACCTGCAATGAGTAAAGTGGTGGAAATGATGGAAGGAAGCATTAGCTTGTTGCAAGTTCCACCCAAACCTTTCCTTTTTTCGTCCTCAGCCCCTGAATCACAATCAAGCGAGACTTATAGTTATTGA

>Glyma10g20918.2   sequence type=CDS   gene model=Glyma10g20918   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAGAACCATGCATTTGGCGCCCTCTTTCTCTCTACCCTTGTTCTTCTTGTCTCTACTGCAAAGGGTAAGTGTCCACCCTCCTTTGTTTGTGGGAACCTCGGCACCATGCACTTCCCTTACACTGACACAAAACACCCTCACTGTGGCCTGTTGGTGATCTATGGCTGCGATGACCGCGACAATGATACCATTAAAACCATTAAGAACAACGGAGCATGGTTTTACATCACACGCGATCAGAACAACGGTACCATTTTGTTCAGAGATGACAAACTCCGCACACTCTTGCTAACCAGACGATGTGGAGTCTTCAGCAACAACTACACCAGTTTGGACACCACTTCTCCTTTCCTTTCACTTCACTTCATGAATCTCAATCTATTCATATGCAACAGCACTCTCAATGTCACCCCTCCTTCTTCAGTCTTTTCCAAATCTACCATATGCAAGGATGAGGACATCTTCTATCGCCCGACTAATATGGATGATTATTATGATTATCATTATCCTTATTTTGAAGCATGTTCGAGGGTTATACTTCCAATCAGAGATTCAGAGATTGTACCTGACAATGGAAACCTCTTTGACTATCTATCAGCTGATATTCCTGTCCAAGCAGAGGTGTTTCATGATTGTTCTTCTTGTTACTATCTTAGAGGAGGCCGGTGTCAACTTGACAACCAAGGGAAGTTCTTCTGTGCTGAAGCTACTTCAGTTGCTGGAGGACTGGGAATTTTGATGGTCTTGGCTTGCATCTTACGAAGATACTATTTTCACAAGAAGAATCCTACTTACCTAATGATTGAGAACTTTCTGAAGCAACATGGACACCTTTCAGCCAAAAGGTACAGTTATTTGGAGGTAAAGAAAATGACTAACTCCTTCAAAAACAAATTAGGCCAAGGAGGGTATGGCAGTGTATATAAAGGGAGGTTACAAAATGGAAGCCTTGTGGCAGTGAAGATTTTAAGCAAGTTAAAAGGTGATGGAGATGAATTCATCAATGAAGTGGCTAGTATTAGCATGACTTCTCATGTTAACATTGTCAGTTTACTGGGATTTTGCCTGGAGGGCTCCAAAAGAGTTCTCATATACGAGTATATGCCAAATGGATCTCTTGAAAAGTTCATATATGAAGAGAAAGATCCTTTAAAGCATAAACTCACATTGAATTGCAGAACTATGTACAATATCGTCATTGGTGTTGCTCGAGGATTGGAGTACTTGCACAAGGGTTGTAACACCAAAATCTTGCATTTTGACATAAAACCTCACAACATACTGCTTGATGAGTTGTTTTGCCCAAAAATATCAGATTTTGGGCTTGCTAAAATATGTCCTAGAGAAAAAAGTATTGTATCAATGATGGTTGCAAGGGGAACTGTAGGGTATATTGCTCCTGAATTGTTCTGCAGAAATTTTGGTGGAGTGTCCCATAAATCAGATGTCTACAGTTATGGAATGATGGTCTTGGAAATGCTTGGTGCTAGAGAGAATAATAATAGCAGAGTTGATTTTTCAAGTGAAAATTACTTTCCACATTGGATATACAGCCATCTTGAATTAAATCAAGAGCTTCAATTGCGCTGTATTAAAAAACAAAATGATAAAGAAATGGTGAGAAAAATGACTATAGTGAGTTTATGGTGCATACAAACTGACCCTTCAAAACGACCTGCAATGAGTAAAGTGGTGGAAATGATGGAAGGAAGCATTAGCTTGTTGCAAGTTCCACCCAAACCTTTCCTTTTTTCGTCCTCAGCCCCTGAATCACAATCAAGCGAGACTTATAGTTATTGA
Predicted protein sequences of Glyma10g20918
>Glyma10g20918.1   sequence type=predicted peptide   gene model=Glyma10g20918   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKNHAFGALFLSTLVLLVSTAKGKCPPSFVCGNLGTMHFPYTDTKHPHCGLLVIYGCDDRDNDTIKTIKNNGAWFYITRDQNNGTILFRDDKLRTLLLTRRCGVFSNNYTSLDTTSPFLSLHFMNLNLFICNSTLNVTPPSSVFSKSTICKDEDIFYRPTNMDDYYDYHYPYFEACSRVILPIRDSEIVPDNGNLFDYLSADIPVQAEVFHDCSSCYYLRGGRCQLDNQGKFFCAEEKTSKKEKIVVAATSVAGGLGILMVLACILRRYYFHKKNPTYLMIENFLKQHGHLSAKRYSYLEVKKMTNSFKNKLGQGGYGSVYKGRLQNGSLVAVKILSKLKGDGDEFINEVASISMTSHVNIVSLLGFCLEGSKRVLIYEYMPNGSLEKFIYEEKDPLKHKLTLNCRTMYNIVIGVARGLEYLHKGCNTKILHFDIKPHNILLDELFCPKISDFGLAKICPREKSIVSMMVARGTVGYIAPELFCRNFGGVSHKSDVYSYGMMVLEMLGARENNNSRVDFSSENYFPHWIYSHLELNQELQLRCIKKQNDKEMVRKMTIVSLWCIQTDPSKRPAMSKVVEMMEGSISLLQVPPKPFLFSSSAPESQSSETYSY*

>Glyma10g20918.2   sequence type=predicted peptide   gene model=Glyma10g20918   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKNHAFGALFLSTLVLLVSTAKGKCPPSFVCGNLGTMHFPYTDTKHPHCGLLVIYGCDDRDNDTIKTIKNNGAWFYITRDQNNGTILFRDDKLRTLLLTRRCGVFSNNYTSLDTTSPFLSLHFMNLNLFICNSTLNVTPPSSVFSKSTICKDEDIFYRPTNMDDYYDYHYPYFEACSRVILPIRDSEIVPDNGNLFDYLSADIPVQAEVFHDCSSCYYLRGGRCQLDNQGKFFCAEATSVAGGLGILMVLACILRRYYFHKKNPTYLMIENFLKQHGHLSAKRYSYLEVKKMTNSFKNKLGQGGYGSVYKGRLQNGSLVAVKILSKLKGDGDEFINEVASISMTSHVNIVSLLGFCLEGSKRVLIYEYMPNGSLEKFIYEEKDPLKHKLTLNCRTMYNIVIGVARGLEYLHKGCNTKILHFDIKPHNILLDELFCPKISDFGLAKICPREKSIVSMMVARGTVGYIAPELFCRNFGGVSHKSDVYSYGMMVLEMLGARENNNSRVDFSSENYFPHWIYSHLELNQELQLRCIKKQNDKEMVRKMTIVSLWCIQTDPSKRPAMSKVVEMMEGSISLLQVPPKPFLFSSSAPESQSSETYSY*






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