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Report for Sequence Feature Glyma10g15800

Feature Type:gene_model
Chromosome:Gm10
Start:18469775
stop:18481056
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G41560AT Annotation by Michelle Graham. TAIR10: autoinhibited Ca(2+)-ATPase, isoform 4 | chr2:17332256-17337179 REVERSE LENGTH=1030 SoyBaseE_val: 0ISS
GO:0006754GO-bp Annotation by Michelle Graham. GO Biological Process: ATP biosynthetic process SoyBaseN/AISS
GO:0006812GO-bp Annotation by Michelle Graham. GO Biological Process: cation transport SoyBaseN/AISS
GO:0006816GO-bp Annotation by Michelle Graham. GO Biological Process: calcium ion transport SoyBaseN/AISS
GO:0006882GO-bp Annotation by Michelle Graham. GO Biological Process: cellular zinc ion homeostasis SoyBaseN/AISS
GO:0006970GO-bp Annotation by Michelle Graham. GO Biological Process: response to osmotic stress SoyBaseN/AISS
GO:0008152GO-bp Annotation by Michelle Graham. GO Biological Process: metabolic process SoyBaseN/AISS
GO:0009624GO-bp Annotation by Michelle Graham. GO Biological Process: response to nematode SoyBaseN/AISS
GO:0009651GO-bp Annotation by Michelle Graham. GO Biological Process: response to salt stress SoyBaseN/AISS
GO:0042742GO-bp Annotation by Michelle Graham. GO Biological Process: defense response to bacterium SoyBaseN/AISS
GO:0043069GO-bp Annotation by Michelle Graham. GO Biological Process: negative regulation of programmed cell death SoyBaseN/AISS
GO:0055081GO-bp Annotation by Michelle Graham. GO Biological Process: anion homeostasis SoyBaseN/AISS
GO:0070588GO-bp Annotation by Michelle Graham. GO Biological Process: calcium ion transmembrane transport SoyBaseN/AISS
GO:0000325GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plant-type vacuole SoyBaseN/AISS
GO:0005773GO-cc Annotation by Michelle Graham. GO Cellular Compartment: vacuole SoyBaseN/AISS
GO:0005774GO-cc Annotation by Michelle Graham. GO Cellular Compartment: vacuolar membrane SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0009705GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plant-type vacuole membrane SoyBaseN/AISS
GO:0016020GO-cc Annotation by Michelle Graham. GO Cellular Compartment: membrane SoyBaseN/AISS
GO:0000166GO-mf Annotation by Michelle Graham. GO Molecular Function: nucleotide binding SoyBaseN/AISS
GO:0003824GO-mf Annotation by Michelle Graham. GO Molecular Function: catalytic activity SoyBaseN/AISS
GO:0005388GO-mf Annotation by Michelle Graham. GO Molecular Function: calcium-transporting ATPase activity SoyBaseN/AISS
GO:0005516GO-mf Annotation by Michelle Graham. GO Molecular Function: calmodulin binding SoyBaseN/AISS
GO:0005524GO-mf Annotation by Michelle Graham. GO Molecular Function: ATP binding SoyBaseN/AISS
GO:0015662GO-mf Annotation by Michelle Graham. GO Molecular Function: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism SoyBaseN/AISS
GO:0046872GO-mf Annotation by Michelle Graham. GO Molecular Function: metal ion binding SoyBaseN/AISS
KOG0204 KOG Calcium transporting ATPase JGI ISS
PTHR24093Panther FAMILY NOT NAMED JGI ISS
PTHR24093:SF73Panther SUBFAMILY NOT NAMED JGI ISS
PF00122PFAM E1-E2 ATPase JGI ISS
PF00689PFAM Cation transporting ATPase, C-terminus JGI ISS
PF00690PFAM Cation transporter/ATPase, N-terminus JGI ISS
PF00702PFAM haloacid dehalogenase-like hydrolase JGI ISS
PF12515PFAM Ca2+-ATPase N terminal autoinhibitory domain JGI ISS
UniRef100_I1LA34UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LA34_SOYBN SoyBaseE_val: 0ISS
UniRef100_Q93YX7UniRef Annotation by Michelle Graham. Most informative UniRef hit: Type IIB calcium ATPase n=1 Tax=Medicago truncatula RepID=Q93YX7_MEDTR SoyBaseE_val: 0ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma10g15800 not represented in the dataset

Glyma10g15800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.10g107700 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma10g15800.1   sequence type=CDS   gene model=Glyma10g15800   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGAGTTTCCTGAATCCGGAGGAGTTCAAACTGAGTCACAGGGATCGTTCCATCGAAACGTTGGAGAAATGGAGATCCGCAGCGTGGTTGGTCAAGAACCCTAGAAGACGGTTCCGCTGGGCCGCGGATCTCGTCAAACGCAAACACGCCGAAGATAAACGCCGCAAAATACAGAGCACGATTCGGACCGCTCTCACTGTTAGAAGGGCAGCAGATCAATTTATCAGCGTTCTTCCTCCAGCTGAATACAAAGTGTCAGAAAAGACGAGAGAAGCTGGTTTTAGTATTGAACCAGATGATATTGCATCAGTTGTTCGAGGCCATGACTACAATTACTATAAAAAAATTGGTCAAGTTGAAGGGATTATAGAGAAACTCAGTGCCTCAGCCGATGACGGTGTTGGTCAAGACAGTATAGATACCAGGCAAGATATTTATGGAGTCAACCGTTATACTGAGAAACCTTCTAAAAGCTTCCTGATGTTTGTTTGGGAAGCACTGCATGACTTAACACTAATGATTCTCATGGTTTGTGCTATAGTTTCTATAGCTATAGGGCTTCCCACTGAAGGGTGGCCAAAAGGTGTTTATGATGGTCTGGGAATCATACTTAGTATATTCTTGGTGGTCATTGTTACTGCCATCAGTGACTACCAGCAATCCCTGCAGTTCAGGGATTTAGACAAAGAAAAGAAAAAGATCTTTGTTCAGGTCACGAGAGACAGAAAAAGACAGAAGGTCTCAATTTATGATTTGGTTGTGGGAGATATTGTTCATTTGTCAACCGGTGATCAAGTTCCAGCTGATGGAATTTATATATCAGGGTATTCTTTGGTAATTGATGAGTCAAGTTTAACAGGTGAGAGCGAGCCCGTAAATATAGATGAAGAAAGACCTTTTCTTCTTTCAGGAACCAAAGTACAAGATGGTCAGGGGAAGATGATAGTTACAACTGTTGGCATGAGGACCGAATGGGGAAAGTTGATGGAAACTCTAAGTGAGGGAGGAGAGGATGAGACTCCACTGCAGGTGAAATTGAATGGAGTTGCTACAGTTATTGGTAAAATTGGTTTGACTTTTTCTGTGCTGACATTTGTGGTGTTGACAATAAGGTTTGTTGTTGAAAAAGCAGTTCGTGGGGAGTTTGCTAGTTGGTCTTCAAATGATGCATTGAAGCTGCTGGACTACTTTGCTATTGCGGTAACCATAATAGTTGTTGCAATTCCTGAAGGATTGCCATTAGCTGTGACACTAAGTCTTGCTTTTGCGATGAAAAAGTTAATGAAGGATAAAGCACTTGTGAGACATCTTTCTGCCTGCGAGACTATGGGCTCGGCGACCTGCATCTGCACAGATAAAACAGGAACATTGACCACTAACCATATGGTGGTTAATAAAATTTGGATATGTGGAAAGATCAATGAGATTAAAGGCAATGAGAGTATTGACAAACTGAAGACAGAGATATCTGAAGAAGTTTTAAGCATCCTTTTGCGGTCTATATTTCAAAATACTTCTTCCGAAGTTGTTAAGGACAAAGATGGAAAAACGACAATACTAGGAACACCAACAGAATCAGCATTATTGGAATTTGGCTTGCTTGCAGGTGGTGATTTTGAAGCGCAGCGTGGAACATATAAGATACTTAAGGTTGTGCCTTTCAATTCAGTCCGGAAGAAGATGTCTGTGCTAGTAGGTCTTCCTGATGGAGGTGTCCAAGCTTTCTGCAAAGGTGCATCAGAAATAGTATTAAAATTGTGTAACAAAGTTATTGATCCAAATGGAACAGCTGTTGATCTTTCTGATGAGCAGGCAAAGAAAGTCTCTGACATTATAAATGGATTTGCCAATGAAGCTTTGAGAACTCTTTGTTTAGCTCTCAAAGATGTAAATGGAACCCAAGGAGAAAGCAGCATCCCTGAAGATAGCTATACTCTGATAGCCATTGTGGGAATCAAGGATCCTGTGCGCCCTGGGGTTAGGGAAGCTGTTAAAACTTGTTTAGCTGCTGGAATAACTGTCCGCATGGTAACTGGTGATAACATAAATACGGCTAGGGCTATAGCTAGAGAATGTGGCATTCTTACAGAGGATGGTGTGGCCATAGAAGGACCCCACTTTCGGGACTTGTCTACAGAGCAAATGAAGAGTATTATACCAAGAATTCAGGTTATGGCGCGATCCTTACCTCTTGACAAGCATACCTTGGTAACCCGTTTGAGGAATATGTTTGGTGAGGTTGTAGCTGTTACTGGTGATGGAACCAATGATGCTCCTGCACTGCATGAGTCAGACATTGGGCTTGCTATGGGCATAGCTGGAACAGAGGTTGCCAAAGAAAATGCTGATGTCATTATAATGGATGATAACTTCACTACTATTGTCAATGTGGCCAGATGGGGACGGGCCATATACATAAACATTCAAAAATTTGTGCAGTTTCAGTTAACAGTCAATATTGTTGCTCTGATTATTAACTTTGTTTCTGCATGCATCACAGGATCTGCTCCCCTCACAGCTGTTCAGTTGCTTTGGGTCAACTTGATTATGGACACTCTGGGTGCATTGGCTTTGGCCACTGAACCTCCCAATGATGGACTTATGCTAAGACCCCCAGTTGGAAGGACAACAAATTTTATCACCAAACCCATGTGGAGGAATATTTTTGGTCAAAGTTTATATCAACTAATTGTCCTTGCGGTCCTCACTTTTGATGGGAAGAGGCTACTGAGAATTAATGGTCCAGATGCGACTATAGTGCTCAACACTTTGATATTCAACTCCTTTGTATTTTGCCAGGTTTTCAATGAGATAAACAGCCGAGAAATCGAAAAGATAAACATATTCAAAGGCATGTTTGAGAGCTGGATATTTTTCACGGTGATATTCTCCACAGTGGTGTTTCAAGTACTCATAGTTGAGTTCCTGGGAACATTTGCCAGCACAGTGCCTCTAAGCTGGCAATTCTGGGTGCTCAGCGTTGTAATAGGAGCATTTAGCATGCCTATATCTGTCATACTCAAGTGCATTCCAGTTGAAAGAGGAGGTATTACAACGCACCATGATGGTTATGAGGCACTACCTTCTGGTCCCGAGCTAGCATAA

>Glyma10g15800.1   sequence type=predicted peptide   gene model=Glyma10g15800   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MESFLNPEEFKLSHRDRSIETLEKWRSAAWLVKNPRRRFRWAADLVKRKHAEDKRRKIQSTIRTALTVRRAADQFISVLPPAEYKVSEKTREAGFSIEPDDIASVVRGHDYNYYKKIGQVEGIIEKLSASADDGVGQDSIDTRQDIYGVNRYTEKPSKSFLMFVWEALHDLTLMILMVCAIVSIAIGLPTEGWPKGVYDGLGIILSIFLVVIVTAISDYQQSLQFRDLDKEKKKIFVQVTRDRKRQKVSIYDLVVGDIVHLSTGDQVPADGIYISGYSLVIDESSLTGESEPVNIDEERPFLLSGTKVQDGQGKMIVTTVGMRTEWGKLMETLSEGGEDETPLQVKLNGVATVIGKIGLTFSVLTFVVLTIRFVVEKAVRGEFASWSSNDALKLLDYFAIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMKDKALVRHLSACETMGSATCICTDKTGTLTTNHMVVNKIWICGKINEIKGNESIDKLKTEISEEVLSILLRSIFQNTSSEVVKDKDGKTTILGTPTESALLEFGLLAGGDFEAQRGTYKILKVVPFNSVRKKMSVLVGLPDGGVQAFCKGASEIVLKLCNKVIDPNGTAVDLSDEQAKKVSDIINGFANEALRTLCLALKDVNGTQGESSIPEDSYTLIAIVGIKDPVRPGVREAVKTCLAAGITVRMVTGDNINTARAIARECGILTEDGVAIEGPHFRDLSTEQMKSIIPRIQVMARSLPLDKHTLVTRLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFTTIVNVARWGRAIYINIQKFVQFQLTVNIVALIINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMLRPPVGRTTNFITKPMWRNIFGQSLYQLIVLAVLTFDGKRLLRINGPDATIVLNTLIFNSFVFCQVFNEINSREIEKINIFKGMFESWIFFTVIFSTVVFQVLIVEFLGTFASTVPLSWQFWVLSVVIGAFSMPISVILKCIPVERGGITTHHDGYEALPSGPELA*







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