|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G41560 | AT | Annotation by Michelle Graham. TAIR10: autoinhibited Ca(2+)-ATPase, isoform 4 | chr2:17332256-17337179 REVERSE LENGTH=1030 | SoyBase | E_val: 0 | ISS |
GO:0006754 | GO-bp | Annotation by Michelle Graham. GO Biological Process: ATP biosynthetic process | SoyBase | N/A | ISS |
GO:0006812 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cation transport | SoyBase | N/A | ISS |
GO:0006816 | GO-bp | Annotation by Michelle Graham. GO Biological Process: calcium ion transport | SoyBase | N/A | ISS |
GO:0006882 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cellular zinc ion homeostasis | SoyBase | N/A | ISS |
GO:0006970 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to osmotic stress | SoyBase | N/A | ISS |
GO:0008152 | GO-bp | Annotation by Michelle Graham. GO Biological Process: metabolic process | SoyBase | N/A | ISS |
GO:0009624 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to nematode | SoyBase | N/A | ISS |
GO:0009651 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to salt stress | SoyBase | N/A | ISS |
GO:0042742 | GO-bp | Annotation by Michelle Graham. GO Biological Process: defense response to bacterium | SoyBase | N/A | ISS |
GO:0043069 | GO-bp | Annotation by Michelle Graham. GO Biological Process: negative regulation of programmed cell death | SoyBase | N/A | ISS |
GO:0055081 | GO-bp | Annotation by Michelle Graham. GO Biological Process: anion homeostasis | SoyBase | N/A | ISS |
GO:0070588 | GO-bp | Annotation by Michelle Graham. GO Biological Process: calcium ion transmembrane transport | SoyBase | N/A | ISS |
GO:0000325 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plant-type vacuole | SoyBase | N/A | ISS |
GO:0005773 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: vacuole | SoyBase | N/A | ISS |
GO:0005774 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: vacuolar membrane | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0009705 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plant-type vacuole membrane | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
GO:0000166 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: nucleotide binding | SoyBase | N/A | ISS |
GO:0003824 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: catalytic activity | SoyBase | N/A | ISS |
GO:0005388 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: calcium-transporting ATPase activity | SoyBase | N/A | ISS |
GO:0005516 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: calmodulin binding | SoyBase | N/A | ISS |
GO:0005524 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATP binding | SoyBase | N/A | ISS |
GO:0015662 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | SoyBase | N/A | ISS |
GO:0046872 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: metal ion binding | SoyBase | N/A | ISS |
KOG0204 | KOG | Calcium transporting ATPase | JGI | ISS | |
PTHR24093 | Panther | FAMILY NOT NAMED | JGI | ISS | |
PTHR24093:SF73 | Panther | SUBFAMILY NOT NAMED | JGI | ISS | |
PF00122 | PFAM | E1-E2 ATPase | JGI | ISS | |
PF00689 | PFAM | Cation transporting ATPase, C-terminus | JGI | ISS | |
PF00690 | PFAM | Cation transporter/ATPase, N-terminus | JGI | ISS | |
PF00702 | PFAM | haloacid dehalogenase-like hydrolase | JGI | ISS | |
PF12515 | PFAM | Ca2+-ATPase N terminal autoinhibitory domain | JGI | ISS | |
UniRef100_I1LA34 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LA34_SOYBN | SoyBase | E_val: 0 | ISS |
UniRef100_Q93YX7 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Type IIB calcium ATPase n=1 Tax=Medicago truncatula RepID=Q93YX7_MEDTR | SoyBase | E_val: 0 | ISS |
Glyma10g15800 not represented in the dataset |
Glyma10g15800 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.10g107700 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma10g15800.1 sequence type=CDS gene model=Glyma10g15800 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGAGAGTTTCCTGAATCCGGAGGAGTTCAAACTGAGTCACAGGGATCGTTCCATCGAAACGTTGGAGAAATGGAGATCCGCAGCGTGGTTGGTCAAGAACCCTAGAAGACGGTTCCGCTGGGCCGCGGATCTCGTCAAACGCAAACACGCCGAAGATAAACGCCGCAAAATACAGAGCACGATTCGGACCGCTCTCACTGTTAGAAGGGCAGCAGATCAATTTATCAGCGTTCTTCCTCCAGCTGAATACAAAGTGTCAGAAAAGACGAGAGAAGCTGGTTTTAGTATTGAACCAGATGATATTGCATCAGTTGTTCGAGGCCATGACTACAATTACTATAAAAAAATTGGTCAAGTTGAAGGGATTATAGAGAAACTCAGTGCCTCAGCCGATGACGGTGTTGGTCAAGACAGTATAGATACCAGGCAAGATATTTATGGAGTCAACCGTTATACTGAGAAACCTTCTAAAAGCTTCCTGATGTTTGTTTGGGAAGCACTGCATGACTTAACACTAATGATTCTCATGGTTTGTGCTATAGTTTCTATAGCTATAGGGCTTCCCACTGAAGGGTGGCCAAAAGGTGTTTATGATGGTCTGGGAATCATACTTAGTATATTCTTGGTGGTCATTGTTACTGCCATCAGTGACTACCAGCAATCCCTGCAGTTCAGGGATTTAGACAAAGAAAAGAAAAAGATCTTTGTTCAGGTCACGAGAGACAGAAAAAGACAGAAGGTCTCAATTTATGATTTGGTTGTGGGAGATATTGTTCATTTGTCAACCGGTGATCAAGTTCCAGCTGATGGAATTTATATATCAGGGTATTCTTTGGTAATTGATGAGTCAAGTTTAACAGGTGAGAGCGAGCCCGTAAATATAGATGAAGAAAGACCTTTTCTTCTTTCAGGAACCAAAGTACAAGATGGTCAGGGGAAGATGATAGTTACAACTGTTGGCATGAGGACCGAATGGGGAAAGTTGATGGAAACTCTAAGTGAGGGAGGAGAGGATGAGACTCCACTGCAGGTGAAATTGAATGGAGTTGCTACAGTTATTGGTAAAATTGGTTTGACTTTTTCTGTGCTGACATTTGTGGTGTTGACAATAAGGTTTGTTGTTGAAAAAGCAGTTCGTGGGGAGTTTGCTAGTTGGTCTTCAAATGATGCATTGAAGCTGCTGGACTACTTTGCTATTGCGGTAACCATAATAGTTGTTGCAATTCCTGAAGGATTGCCATTAGCTGTGACACTAAGTCTTGCTTTTGCGATGAAAAAGTTAATGAAGGATAAAGCACTTGTGAGACATCTTTCTGCCTGCGAGACTATGGGCTCGGCGACCTGCATCTGCACAGATAAAACAGGAACATTGACCACTAACCATATGGTGGTTAATAAAATTTGGATATGTGGAAAGATCAATGAGATTAAAGGCAATGAGAGTATTGACAAACTGAAGACAGAGATATCTGAAGAAGTTTTAAGCATCCTTTTGCGGTCTATATTTCAAAATACTTCTTCCGAAGTTGTTAAGGACAAAGATGGAAAAACGACAATACTAGGAACACCAACAGAATCAGCATTATTGGAATTTGGCTTGCTTGCAGGTGGTGATTTTGAAGCGCAGCGTGGAACATATAAGATACTTAAGGTTGTGCCTTTCAATTCAGTCCGGAAGAAGATGTCTGTGCTAGTAGGTCTTCCTGATGGAGGTGTCCAAGCTTTCTGCAAAGGTGCATCAGAAATAGTATTAAAATTGTGTAACAAAGTTATTGATCCAAATGGAACAGCTGTTGATCTTTCTGATGAGCAGGCAAAGAAAGTCTCTGACATTATAAATGGATTTGCCAATGAAGCTTTGAGAACTCTTTGTTTAGCTCTCAAAGATGTAAATGGAACCCAAGGAGAAAGCAGCATCCCTGAAGATAGCTATACTCTGATAGCCATTGTGGGAATCAAGGATCCTGTGCGCCCTGGGGTTAGGGAAGCTGTTAAAACTTGTTTAGCTGCTGGAATAACTGTCCGCATGGTAACTGGTGATAACATAAATACGGCTAGGGCTATAGCTAGAGAATGTGGCATTCTTACAGAGGATGGTGTGGCCATAGAAGGACCCCACTTTCGGGACTTGTCTACAGAGCAAATGAAGAGTATTATACCAAGAATTCAGGTTATGGCGCGATCCTTACCTCTTGACAAGCATACCTTGGTAACCCGTTTGAGGAATATGTTTGGTGAGGTTGTAGCTGTTACTGGTGATGGAACCAATGATGCTCCTGCACTGCATGAGTCAGACATTGGGCTTGCTATGGGCATAGCTGGAACAGAGGTTGCCAAAGAAAATGCTGATGTCATTATAATGGATGATAACTTCACTACTATTGTCAATGTGGCCAGATGGGGACGGGCCATATACATAAACATTCAAAAATTTGTGCAGTTTCAGTTAACAGTCAATATTGTTGCTCTGATTATTAACTTTGTTTCTGCATGCATCACAGGATCTGCTCCCCTCACAGCTGTTCAGTTGCTTTGGGTCAACTTGATTATGGACACTCTGGGTGCATTGGCTTTGGCCACTGAACCTCCCAATGATGGACTTATGCTAAGACCCCCAGTTGGAAGGACAACAAATTTTATCACCAAACCCATGTGGAGGAATATTTTTGGTCAAAGTTTATATCAACTAATTGTCCTTGCGGTCCTCACTTTTGATGGGAAGAGGCTACTGAGAATTAATGGTCCAGATGCGACTATAGTGCTCAACACTTTGATATTCAACTCCTTTGTATTTTGCCAGGTTTTCAATGAGATAAACAGCCGAGAAATCGAAAAGATAAACATATTCAAAGGCATGTTTGAGAGCTGGATATTTTTCACGGTGATATTCTCCACAGTGGTGTTTCAAGTACTCATAGTTGAGTTCCTGGGAACATTTGCCAGCACAGTGCCTCTAAGCTGGCAATTCTGGGTGCTCAGCGTTGTAATAGGAGCATTTAGCATGCCTATATCTGTCATACTCAAGTGCATTCCAGTTGAAAGAGGAGGTATTACAACGCACCATGATGGTTATGAGGCACTACCTTCTGGTCCCGAGCTAGCATAA
>Glyma10g15800.1 sequence type=predicted peptide gene model=Glyma10g15800 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MESFLNPEEFKLSHRDRSIETLEKWRSAAWLVKNPRRRFRWAADLVKRKHAEDKRRKIQSTIRTALTVRRAADQFISVLPPAEYKVSEKTREAGFSIEPDDIASVVRGHDYNYYKKIGQVEGIIEKLSASADDGVGQDSIDTRQDIYGVNRYTEKPSKSFLMFVWEALHDLTLMILMVCAIVSIAIGLPTEGWPKGVYDGLGIILSIFLVVIVTAISDYQQSLQFRDLDKEKKKIFVQVTRDRKRQKVSIYDLVVGDIVHLSTGDQVPADGIYISGYSLVIDESSLTGESEPVNIDEERPFLLSGTKVQDGQGKMIVTTVGMRTEWGKLMETLSEGGEDETPLQVKLNGVATVIGKIGLTFSVLTFVVLTIRFVVEKAVRGEFASWSSNDALKLLDYFAIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMKDKALVRHLSACETMGSATCICTDKTGTLTTNHMVVNKIWICGKINEIKGNESIDKLKTEISEEVLSILLRSIFQNTSSEVVKDKDGKTTILGTPTESALLEFGLLAGGDFEAQRGTYKILKVVPFNSVRKKMSVLVGLPDGGVQAFCKGASEIVLKLCNKVIDPNGTAVDLSDEQAKKVSDIINGFANEALRTLCLALKDVNGTQGESSIPEDSYTLIAIVGIKDPVRPGVREAVKTCLAAGITVRMVTGDNINTARAIARECGILTEDGVAIEGPHFRDLSTEQMKSIIPRIQVMARSLPLDKHTLVTRLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFTTIVNVARWGRAIYINIQKFVQFQLTVNIVALIINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMLRPPVGRTTNFITKPMWRNIFGQSLYQLIVLAVLTFDGKRLLRINGPDATIVLNTLIFNSFVFCQVFNEINSREIEKINIFKGMFESWIFFTVIFSTVVFQVLIVEFLGTFASTVPLSWQFWVLSVVIGAFSMPISVILKCIPVERGGITTHHDGYEALPSGPELA*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||