Glyma10g15790 - SoyBase

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Report for Sequence Feature Glyma10g15790

Feature Type:	gene_model
Chromosome:	Gm10
Start:	18424537
stop:	18426549
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma10g15790

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G36770	AT	Annotation by Michelle Graham. TAIR10: UDP-Glycosyltransferase superfamily protein \| chr2:15415227-15416717 REVERSE LENGTH=496	SoyBase	E_val: 4.00E-61	ISS
GO:0008152	GO-bp	Annotation by Michelle Graham. GO Biological Process: metabolic process	SoyBase	N/A	ISS
GO:0009507	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: chloroplast	SoyBase	N/A	ISS
GO:0008194	GO-mf	Annotation by Michelle Graham. GO Molecular Function: UDP-glycosyltransferase activity	SoyBase	N/A	ISS
GO:0016757	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups	SoyBase	N/A	ISS
GO:0016758	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups	SoyBase	N/A	ISS
KOG1192	KOG	UDP-glucuronosyl and UDP-glucosyl transferase	JGI		ISS
PTHR11926	Panther	GLUCOSYL/GLUCURONOSYL TRANSFERASES	JGI		ISS
PTHR11926:SF15	Panther	UDP-GLUCURONOSYLTRANSFERASE RELATED	JGI		ISS
PF00201	PFAM	UDP-glucoronosyl and UDP-glucosyl transferase	JGI		ISS
UniRef100_I1LA33	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LA33_SOYBN	SoyBase	E_val: 0	ISS
UniRef100_Q8S3B8	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Zeatin O-glucosyltransferase n=1 Tax=Glycine max RepID=Q8S3B8_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma10g15790

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma10g15790 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.10g107900	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma10g15790

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma10g15790

Limit To All Plant Sequences

>Glyma10g15790.1   sequence type=CDS   gene model=Glyma10g15790   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCTTCGAGTGGAAAAATCCTTCCTCACCAAACCCAAGTGGTGGCTGTTCTCATACCGTTCGCTGCACAAGGCCATCTCAATCAGCTTCTGCACCTCTCACGCCTAATCTTATCACACAACATAGCAGTCCATTATGTATGCACTGCCACACACATTCGCCAAGCCACACTTCGAGACAAAAACTCCATTTCCAACATTCATTTCCATGGCTTCGAAGTTCCACCCTTTGCTTCTCCTCCTCCCAACCCCAACAATGAAGAAACTGATTTCCCATCTCATCTAATTCCTTCCTTTGAGGCCTCTTCGCATCTTCGCGAGCCTGTGAGGAATCTTCTTCAGTCCCTCTCATCTCAAGCCAAAAGGGTCATTGTCATCCATGATGCCGCAATGGCATCGGTGGCACAAGATGCCACAAACATGCCAAATGTTGAGAATTACACTTTTCAAATCACGTGTGCCTTTACCACCTTCGTGTATCTTTGGGATAAAATGGGAAGGCCCTCGGTTGAAGGCTTGCATGTACCAGAAATTCCTTCCATGGAAGGATGCTTCACACCCCAATTCATGGATTTCATTATTGCACAGAGAGATTTCGACAAATTTAGTGATGGATACATCTACAACACAAGCAGGGCAATTGAAGGTGCTTACATTGAGTCGATGGAGCGCATCAGTGGTGGCAAGAAGATTTGGGCACTGGGACCATTCAACCCTTTAGCCATTGAGAAGAAAGAATCAAAAGGAAGACACTTATGCATGGAATGGCTTGACAAACAAGATCCAAATTCAGTCATATATGTGTCTTTTGGGACCACAACAAGCTTTAAAGAGGATCAAATTGAACAGATTGCAACTGGGTTGGAACAAAGCAAGCAGAAGTTCATATGGGTGCTGAGAGATGCTGATAAAGGAGACATCTTTGATGGAAATGAAACAAAAAGGTATGAGCTTCCAAATGGGTTTGAGGAGAGGATTAAAGGCATAGGGCTAATTGTGAGAGATTGGGCACCCCAATTGGAAATTCTGAGCCACACTTCAACAGGGGGGTTTATGAGTCATTGTGGATGGAACTCCTGCTTAGAGAGCATAACCATGGGGGTGCCAATAGCATCATGGCCTATGCACTCTGACCAGCCAAGAAACACTGTTTTGATAACACAGGTGCTCAAGGTTGGTTTGGTTGTGAAGGATTGGGCACAAAGGAATGCATTGGTGACTGCGTCAGTTGTTGAGAAGGTTGTCAGAAGGTTGATTGAAACAGAGGAAGGTGATGAGATACGACAGAGAGCAGTGAGGCTTAAAAATGCCATCCATAGGTCCAAAGATGAAGGTGGAGTTTCTCACCTGGAAATGGAGTCTTTCATAGCTCATATCACTAATTAG

Predicted protein sequences of Glyma10g15790

Limit To All Plant Sequences

>Glyma10g15790.1   sequence type=predicted peptide   gene model=Glyma10g15790   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MASSGKILPHQTQVVAVLIPFAAQGHLNQLLHLSRLILSHNIAVHYVCTATHIRQATLRDKNSISNIHFHGFEVPPFASPPPNPNNEETDFPSHLIPSFEASSHLREPVRNLLQSLSSQAKRVIVIHDAAMASVAQDATNMPNVENYTFQITCAFTTFVYLWDKMGRPSVEGLHVPEIPSMEGCFTPQFMDFIIAQRDFDKFSDGYIYNTSRAIEGAYIESMERISGGKKIWALGPFNPLAIEKKESKGRHLCMEWLDKQDPNSVIYVSFGTTTSFKEDQIEQIATGLEQSKQKFIWVLRDADKGDIFDGNETKRYELPNGFEERIKGIGLIVRDWAPQLEILSHTSTGGFMSHCGWNSCLESITMGVPIASWPMHSDQPRNTVLITQVLKVGLVVKDWAQRNALVTASVVEKVVRRLIETEEGDEIRQRAVRLKNAIHRSKDEGGVSHLEMESFIAHITN*

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