|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT4G20850 | AT | Annotation by Michelle Graham. TAIR10: tripeptidyl peptidase ii | chr4:11160935-11169889 REVERSE LENGTH=1380 | SoyBase | E_val: 2.00E-45 | ISS |
GO:0006508 | GO-bp | Annotation by Michelle Graham. GO Biological Process: proteolysis | SoyBase | N/A | ISS |
GO:0008152 | GO-bp | Annotation by Michelle Graham. GO Biological Process: metabolic process | SoyBase | N/A | ISS |
GO:0009630 | GO-bp | Annotation by Michelle Graham. GO Biological Process: gravitropism | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0005773 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: vacuole | SoyBase | N/A | ISS |
GO:0005774 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: vacuolar membrane | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
GO:0022626 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytosolic ribosome | SoyBase | N/A | ISS |
GO:0004252 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: serine-type endopeptidase activity | SoyBase | N/A | ISS |
GO:0008240 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: tripeptidyl-peptidase activity | SoyBase | N/A | ISS |
PTHR10795 | Panther | SUBTILISIN/KEXIN-RELATED SERINE PROTEASE | JGI | ISS | |
PTHR10795:SF2 | Panther | SUBTILISIN-RELATED SERINE PROTEASE | JGI | ISS | |
PF00082 | PFAM | Subtilase family | JGI | ISS | |
UniRef100_G7IAM4 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Tripeptidyl-peptidase n=1 Tax=Medicago truncatula RepID=G7IAM4_MEDTR | SoyBase | E_val: 7.00E-45 | ISS |
UniRef100_UPI000233AD78 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233AD78 related cluster n=1 Tax=unknown RepID=UPI000233AD78 | SoyBase | E_val: 3.00E-48 | ISS |
Glyma10g15211 not represented in the dataset |
Glyma10g15211 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.10g109100 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma10g15211.2 sequence type=transcript gene model=Glyma10g15211 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high TTTTAATGATGGGCATGCAATATTTCTTTTTTAGCATAACTGTGACCTTATCAACATGAGTTATGTTGAAGCAACATTACTATCAGACTATGGGCGCTTTGTTGATCTTGTGAATGAGGAAGTGAACAAACATCGTCTGATATTTGTGAGCAGTGTTGGTAATAGCGGGCCAAGATTGAGCACTGTTGGTGCACCTGGTGGTACATCTTCCAGTATCATAGGTGTTGGCGCATATGTATCTCCTGCTATGGTTGTTGGTGCTCATTGTGTTGTTGAACCTCCATCTGATGAGCTTGAATACACTTGGTATATTCACTTCTCTCAAAACTTCCTCATTGATAAATTTGTTGTGCATTGTTGATCACAATGATTGAGTCAGGTCTTTTTAAACTTGTAGAATGAATTTAAGATGGGAAAACCAATTACTGATGACTTGTAATCTTATAAAACTGATGAGAAATTAAAGAGTTAACTATGCCACACTAGTTAACATCCTTAAGGAAAGA
>Glyma10g15211.1 sequence type=CDS gene model=Glyma10g15211 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAATAAACCAATGTGTATCCAAAAGCTACTCATTTCTCTGTTTCCATCTTCCGTGTTCACCTTCTCCTCTAGCAAAGCTCCCTTGTGCATCTTTAGCAAGCTCACAAGCTCATCCTTAGAGAGATTTGTGTGGCATAACTGTGACCTTATCAACATGAGTTATGTTGAAGCAACATTACTATCAGACTATGGGCGCTTTGTTGATCTTGTGAATGAGGAAGTGAACAAACATCGTCTGATATTTGTGAGCAGTGTTGGTAATAGCGGGCCAAGATTGAGCACTGTTGGTGCACCTGGTGGTACATCTTCCAGTATCATAGGTGTTGGCGCATATGTATCTCCTGCTATGGTTGTTGGTGCTCATTGTGTTGTTGAACCTCCATCTGATGAGCTTGAATACACTTGGTATATTCACTTCTCTCAAAACTTCCTCATTGATAAATTTGTTGTGCATTGTTGA >Glyma10g15211.2 sequence type=CDS gene model=Glyma10g15211 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGTTATGTTGAAGCAACATTACTATCAGACTATGGGCGCTTTGTTGATCTTGTGAATGAGGAAGTGAACAAACATCGTCTGATATTTGTGAGCAGTGTTGGTAATAGCGGGCCAAGATTGAGCACTGTTGGTGCACCTGGTGGTACATCTTCCAGTATCATAGGTGTTGGCGCATATGTATCTCCTGCTATGGTTGTTGGTGCTCATTGTGTTGTTGAACCTCCATCTGATGAGCTTGAATACACTTGGTATATTCACTTCTCTCAAAACTTCCTCATTGATAAATTTGTTGTGCATTGTTGA
>Glyma10g15211.1 sequence type=predicted peptide gene model=Glyma10g15211 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MNKPMCIQKLLISLFPSSVFTFSSSKAPLCIFSKLTSSSLERFVWHNCDLINMSYVEATLLSDYGRFVDLVNEEVNKHRLIFVSSVGNSGPRLSTVGAPGGTSSSIIGVGAYVSPAMVVGAHCVVEPPSDELEYTWYIHFSQNFLIDKFVVHC* >Glyma10g15211.2 sequence type=predicted peptide gene model=Glyma10g15211 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSYVEATLLSDYGRFVDLVNEEVNKHRLIFVSSVGNSGPRLSTVGAPGGTSSSIIGVGAYVSPAMVVGAHCVVEPPSDELEYTWYIHFSQNFLIDKFVVHC*
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