|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G54290 | AT | Annotation by Michelle Graham. TAIR10: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); Has 59 Blast hits to 59 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr3:20104623-20105845 REVERSE LENGTH=350 | SoyBase | E_val: 1.00E-93 | ISS |
GO:0006499 | GO-bp | Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation | SoyBase | N/A | ISS |
GO:0006661 | GO-bp | Annotation by Michelle Graham. GO Biological Process: phosphatidylinositol biosynthetic process | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0003674 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: molecular function | SoyBase | N/A | ISS |
PF01814 | PFAM | Hemerythrin HHE cation binding domain | JGI | ISS | |
UniRef100_I1LA07 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LA07_SOYBN | SoyBase | E_val: 0 | ISS |
Glyma10g14660 not represented in the dataset |
Glyma10g14660 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.10g111100 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma10g14660.1 sequence type=CDS gene model=Glyma10g14660 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGGTAACTGTCTGCGCACGTCGGAAAAGCTGACGGCGGAGATCGTTCCCCACGGCGGCGCCACCGTGTACCCCGCCGTGCGCCTCCACGGCTCCCCCAACAGCATTTTCGCCGCATACACTCGCTTCGCGGTCCTTCACAACGCCGTTCCCCCGGACCCTGTCCTCGCCGCCGCACCACCACCGCAGGCCCCAACAGCATTTTGTGGCGGAAGATCTGAGGCGGCGGTTCCCGTGGTTTTCCACGTGGGACACGACGTCGCGTCGGGGTCCCGCGACGCGCTGCTCCGGTTTATAGACTTGAAATTCCCCGACCTGGCGGAGGAGGAGACGGCGCCACCTCCTCCGGCGGAGAGCGGCGGAGGGAAGGAGGAAACGTCGTTGGTTGTGAGGGTGACGCGGCTGCAGCATAAGAGCATGACTTGGCACTTGGAGAGGATGGTGGGGTGGGCGGAGGATCTAGCGACACGTGGCGGAACGAGGGCCGTTGATCCAAAGGTGGGGACTTGGAAGATGGAGGTTGTGAAATTTGGGAGAAGTTACTCTCAGTTGTTGGAGGTGATGTTGGAACATGCACAAATGGAAGAGAGAGTTCTATTTCCTATCTTTGATAGTGCTGATCGAGGGCTATCTAAAGCTGCAAAGGAGGAACATGCTAGGGACCTACCAATCATGAATGGCATCAAAGAAATTATTAAATCCGTTGAGGTTTTAGACTCACGCAGCCTCAATTACAAAGAGACTTTGTACAACCTTTCTAATAGGCTCAAATCATTACAGGGACTTTGCAAGCAACACTTCATGGAAGAGGATTCAGAATTACTTCCAATAATGGAAGCAGTGGGGTTGAGCAAAGAGGAGGAGGAGGATGCATTAGAGCATTGTTTTGTTGTGATGCAAGGAACACATGGCCGGTTGTTAAAGTTCCTTCTTGAGGGGCTCCCACCTAATGATTCTATGAAGTACTTGGACTTGATCAGCATGTGCAGGGACAAAGAGAGGATGGAATCCATGCTTAGGGTGGTAGTGGAGTGA
>Glyma10g14660.1 sequence type=predicted peptide gene model=Glyma10g14660 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MGNCLRTSEKLTAEIVPHGGATVYPAVRLHGSPNSIFAAYTRFAVLHNAVPPDPVLAAAPPPQAPTAFCGGRSEAAVPVVFHVGHDVASGSRDALLRFIDLKFPDLAEEETAPPPPAESGGGKEETSLVVRVTRLQHKSMTWHLERMVGWAEDLATRGGTRAVDPKVGTWKMEVVKFGRSYSQLLEVMLEHAQMEERVLFPIFDSADRGLSKAAKEEHARDLPIMNGIKEIIKSVEVLDSRSLNYKETLYNLSNRLKSLQGLCKQHFMEEDSELLPIMEAVGLSKEEEEDALEHCFVVMQGTHGRLLKFLLEGLPPNDSMKYLDLISMCRDKERMESMLRVVVE*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||