Report for Sequence Feature Glyma10g14630
Feature Type: gene_model
Chromosome: Gm10
Start: 16821889
stop: 16824959
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma10g14630
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G54260 AT
Annotation by Michelle Graham. TAIR10: TRICHOME BIREFRINGENCE-LIKE 36 | chr3:20085097-20086745 REVERSE LENGTH=379
SoyBase E_val: 2.00E-171 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0010089 GO-bp
Annotation by Michelle Graham. GO Biological Process: xylem development
SoyBase N/A ISS
GO:0044036 GO-bp
Annotation by Michelle Graham. GO Biological Process: cell wall macromolecule metabolic process
SoyBase N/A ISS
PTHR13533 Panther
FAMILY NOT NAMED
JGI ISS
PTHR13533:SF3 Panther
gb def: unknown protein [takifugu rubripes]
JGI ISS
PF03005 PFAM
Arabidopsis proteins of unknown function
JGI ISS
UniRef100_I1LA06 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LA06_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q940H3 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Protein trichome birefringence-like 36 n=1 Tax=Arabidopsis thaliana RepID=Q940H3_ARATH
SoyBase E_val: 8.00E-169 ISS
Expression Patterns of Glyma10g14630
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma10g14630 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.10g111200 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma10g14630
Coding sequences of Glyma10g14630
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma10g14630.1 sequence type=CDS gene model=Glyma10g14630 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCAACACCAAAGATTCACTTGCTTGTTTCGTCTTTCTTGTTGTGTGGTACCTTCCTGAGCTTGTTCCACTGCACATTGTCCCTTCTGAACCCTGAGGATGGGGTTGGCATTCTGGTGCAAGCTGATGATGATGTTAGCATGGCCCAAAGCAACAGAGATTCTAGGAAGAGATGTGACATTTCTGTTGGAAAATGGGTTTATGATGACTCTTACCCTCTCTATGACTCTAGTTGTCCATATCTCAGCTCTGCCGTTACTTGTCAAAGGAATGGGAGACCTGATTCTGACTATGAGAAGTGGAAGTGGAAGCCAAGTGGTTGTACCATGCCAAGATTTGATGCACTAAGGTTTCTAGGAAGAATGAGAAGAAAGAGAATAATGCTGGTGGGCGATTCAATAATGAGAAATCAGTGGGAATCTCTTGTTTGCTTAGTGCAAGGAGTTATTCCAACTGGTCGAAAAAGGGTGACTTATAACGGACCTGGAATGGCCTTCCATGCCATGGATTTTGAGACCTCAATTGAGTTTTTCTGGGCACCCCTGTTGGTAGAACTGAAGAAAGGTTCAGAAAATAAGAGAATTTTACATCTTGATTTGATTGAAGAAAATGCAAGGTATTGGAGAGGAGTTGATATCCTTGTATTTGATTCAGCCCATTGGTGGACTCACCCAGATCAAACCAGCTCGTGGGATTACTACCTGGAGGGAAACAATCTCACCAGGAATATGAATCCCATGGTTGCTTACCAGAAAGGACTCAGTACATGGGCAAGGTGGGTGGATCAAAATCTAAACCCTAGGAGAACTGAAGTCATTTTTAGAAGCATGTCTCCTAGGCATAACAGGGAAAATGGTTGGAAATGCTACAATCAGAAGCAGCCTCTACCATTTTCCAGCCACCTACATGTTCCTGAACCTTTGGCAGTGCTACAAGGAGTGTTGAAGAGAATGAGATTTCCAGTATATCTGCAAGACATCACAACAATGACCGCGTTGCGCAGAGACGGGCATCCCTCGGTATATAGGAGGGTAATAAGCCAAGATGAGAAGCAGAAACCAGGAAAAGGCCATTCCTCTGATTGCAGCCATTGGTGCCTCCCTGGGGTGCCTGATATTTGGAATGAGATGCTGAGTGCACTGCTGTGA
Predicted protein sequences of Glyma10g14630
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma10g14630.1 sequence type=predicted peptide gene model=Glyma10g14630 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MATPKIHLLVSSFLLCGTFLSLFHCTLSLLNPEDGVGILVQADDDVSMAQSNRDSRKRCDISVGKWVYDDSYPLYDSSCPYLSSAVTCQRNGRPDSDYEKWKWKPSGCTMPRFDALRFLGRMRRKRIMLVGDSIMRNQWESLVCLVQGVIPTGRKRVTYNGPGMAFHAMDFETSIEFFWAPLLVELKKGSENKRILHLDLIEENARYWRGVDILVFDSAHWWTHPDQTSSWDYYLEGNNLTRNMNPMVAYQKGLSTWARWVDQNLNPRRTEVIFRSMSPRHNRENGWKCYNQKQPLPFSSHLHVPEPLAVLQGVLKRMRFPVYLQDITTMTALRRDGHPSVYRRVISQDEKQKPGKGHSSDCSHWCLPGVPDIWNEMLSALL*