|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G21090 | AT | Annotation by Michelle Graham. TAIR10: ABC-2 type transporter family protein | chr3:7391497-7394933 REVERSE LENGTH=691 | SoyBase | E_val: 7.00E-84 | ISS |
GO:0009062 | GO-bp | Annotation by Michelle Graham. GO Biological Process: fatty acid catabolic process | SoyBase | N/A | ISS |
GO:0080167 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to karrikin | SoyBase | N/A | ISS |
GO:0005886 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
GO:0000166 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: nucleotide binding | SoyBase | N/A | ISS |
GO:0005524 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATP binding | SoyBase | N/A | ISS |
GO:0016887 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATPase activity | SoyBase | N/A | ISS |
GO:0017111 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: nucleoside-triphosphatase activity | SoyBase | N/A | ISS |
GO:0042626 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATPase activity, coupled to transmembrane movement of substances | SoyBase | N/A | ISS |
PTHR19241 | Panther | ATP-BINDING CASSETTE TRANSPORTER | JGI | ISS | |
PTHR19241:SF20 | Panther | ABC TRANSPORTER | JGI | ISS | |
PF01061 | PFAM | ABC-2 type transporter | JGI | ISS | |
UniRef100_G7I6I8 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: ABC transporter G family member n=1 Tax=Medicago truncatula RepID=G7I6I8_MEDTR | SoyBase | E_val: 1.00E-93 | ISS |
UniRef100_I1LIK4 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LIK4_SOYBN | SoyBase | E_val: 5.00E-98 | ISS |
Glyma10g13710 not represented in the dataset |
Glyma10g13710 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma10g13710.1 sequence type=CDS gene model=Glyma10g13710 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high CACACCTCAAAAACCACAAAAAGCTCCGACATTGTGCCTGATCTTCAGAACACTATGTACGCTTTCATCGACGGTTATCCTTGCGATGTTCCAAATTCACCAGATCCTTTCATGAATTTGGCTACAGCACAGATTAAGGCAACACTAGTTGAGAAATATAGGCGTTCAACATATGCCACAAGGGCAAAGAACAGAATTCAAGAACTGTCTATTGATGGCTTCAACCTCCAACACAACATGGAAGTCAAGCTAAGATGTGGGTTACTACTGGTGAGGATCATAACTTATATCATTGTATCCATATGTTTGGGAACCGTTTATTTTGATGTTGGCTATAGCTACACTTCCATCCTGCCCCTAGATGCCTACGGTGCATTTATATCAGGATTTATGACATTCAAAAATGAAGAAAGGCTTAATGGATACTATGGAGTAGCAGCATATATTTTAGCCAACTTCCTTTCTTCATTCCCATTCTTGGTTCTAATTGCTCTGACATCCTGCACCATTATGTATAACATGGTGAAATTCAGGCCAGGAATCAATCACTTTGTGTTTTTCTTTCTCAACATCTACAGCTGCATCTCCGTAATAGAGAGCCTCATGATTGTTGTAGCTTCACTTGTTCCAAATTTCCTCATGGGAATAATTACAGGGGCTGGAATAATAGGAATCATGATGATGACCTCCGGATTCTTCACGTTGCTCTCTGATCTTCCAAAGCCAGTTTGGCGCTACCCATATTTATATATCAGTTATGGTTCTTGCCTTCTTGGGCAATACAGG
>Glyma10g13710.1 sequence type=predicted peptide gene model=Glyma10g13710 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high HTSKTTKSSDIVPDLQNTMYAFIDGYPCDVPNSPDPFMNLATAQIKATLVEKYRRSTYATRAKNRIQELSIDGFNLQHNMEVKLRCGLLLVRIITYIIVSICLGTVYFDVGYSYTSILPLDAYGAFISGFMTFKNEERLNGYYGVAAYILANFLSSFPFLVLIALTSCTIMYNMVKFRPGINHFVFFFLNIYSCISVIESLMIVVASLVPNFLMGIITGAGIIGIMMMTSGFFTLLSDLPKPVWRYPYLYISYGSCLLGQYR
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||