SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma10g07160

Feature Type:gene_model
Chromosome:Gm10
Start:5855811
stop:5857852
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma10g07160
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G53150AT Annotation by Michelle Graham. TAIR10: UDP-glucosyl transferase 73D1 | chr3:19697736-19699259 REVERSE LENGTH=507 SoyBaseE_val: 0ISS
GO:0006865GO-bp Annotation by Michelle Graham. GO Biological Process: amino acid transport SoyBaseN/AISS
GO:0008152GO-bp Annotation by Michelle Graham. GO Biological Process: metabolic process SoyBaseN/AISS
GO:0008194GO-mf Annotation by Michelle Graham. GO Molecular Function: UDP-glycosyltransferase activity SoyBaseN/AISS
GO:0016758GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups SoyBaseN/AISS
KOG1192 KOG UDP-glucuronosyl and UDP-glucosyl transferase JGI ISS
PTHR11926Panther GLUCOSYL/GLUCURONOSYL TRANSFERASES JGI ISS
PTHR11926:SF15Panther UDP-GLUCURONOSYLTRANSFERASE RELATED JGI ISS
PF00201PFAM UDP-glucoronosyl and UDP-glucosyl transferase JGI ISS
UniRef100_G7JZ62UniRef Annotation by Michelle Graham. Most informative UniRef hit: Cytokinin-O-glucosyltransferase n=1 Tax=Medicago truncatula RepID=G7JZ62_MEDTR SoyBaseE_val: 0ISS
UniRef100_I1L936UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1L936_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma10g07160
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma10g07160 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.10g062600 Wm82.a2.v1IGC As supplied by JGI

References for Glyma10g07160
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma10g07160
>Glyma10g07160.1   sequence type=CDS   gene model=Glyma10g07160   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCCATTCAACCAATGCAACCTCACTTTGTGTTGGTTCCACTATTTGCTCAAGGCCACATGATCCCCATGATAGACATGGCAAAGATCTTGGCCGAGCAAGGAGTGGTCGTGACTTTGCTCAGCACCCCTCAAAACGCCTCAAGGTTTGAGCAAACAATCTGCAGAGCAATATCACAATCTGGCCTTCCAATTCACCTCTTGCAAATCCCATTCCCATGCCAACAAGTTGGTCTTCCAATAGGGTGCGAGAATCTTGACACTTTGCAATCAAGAAACCTCCTCAGAAAGTTCTACAATGCACTTGACATGCTTCAAGAGCCCTTGGAAGAGTATCTCAAAAGTCATGCTACTCCTCCAAGTTGCATCATCTCAGACAAATGCATCTCTTGGACTTCAACAACAGCCACAAGGTTCAACATTCCAAGGCTTGTTTTCCACGGCATGTCATGCTTCTCATTGCTCAGCTCACACAACATCAAACTCAGCAATGCTCATCTTTCTGTCAACTCTGATTCACAGCCTTTTGTGATTCCTGGATTGCCACAAAGGGTAATTGAGATAACAAGAGCACAGCTTCCTGGTGCATTTGTTGCTCTACCTGACTTGGATGATTTCAGGGATAAAATGGTTGAGGCTGAAATGTCTGCTTATGGGATTGTGGTGAATAGCTTCGAGGAATTGGAACAAGGGTGCGCCGGCGAGTACGAAAAGGTTATGAACAAGAGAGTTTGGTGCATAGGTCCGGTGTCTTTGTGTAACAAGGAGAGTTTGGACAAGTTTGAGAGAGGGAACAAGCCTTCAATTGAAGAGAAACAATGCTTGGAATGGCTCAACTTAATGGAACAAAGGTCAGTTATTTATGTGTGTCTTGGTAGCTTGTGTAGGCTTGTTCCATCACAACTAATTGAACTTGGGTTGGCCTTGGAAGCATCAAATAGACCCTTTATTTGGGTGGTAAAAACTATAGGAGAGAATTTTTCTGAGGTGGAAAAGTGGTTGGAAGATGAGAATTTTGAGGAAAGGGTCAAGGGGAGAGGTCTTTTGATTAAGGGATGGGCCCCACAAATTCTAATACTCTCTCACCCTTCAATTGGAGGGTTCTTGACTCATTGTGGATGGAATTCAACTATAGAAAGTGTTTGCTCTGGGGTGCCAATGATAACATGGCCTTTGTTTGCTGAGCAATTTTTGAATGAAAAATGCATTGTTGAAGTTTTGAAGATTGGAGTCAGGATAGGGGTCGAGGTACCAGTAAGGTTTGGTGATGAAAAGAAAGGTGGGGTTTTGGTGAAGAAAATACAAATCATGGAAGCTATAGAGATGATTATGGAAGGAGGTGAAGAGGGAGACAAGAGGAGGAGTGGAGTAACAGAACTTGGAAACATTGCTAGAAGGGCTCTAGAGGAGGAAGGTTCATCTCGTTTCAACATTTCATGCTTGATTCAAGATGTAATGAAACATTAA
Predicted protein sequences of Glyma10g07160
>Glyma10g07160.1   sequence type=predicted peptide   gene model=Glyma10g07160   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MAIQPMQPHFVLVPLFAQGHMIPMIDMAKILAEQGVVVTLLSTPQNASRFEQTICRAISQSGLPIHLLQIPFPCQQVGLPIGCENLDTLQSRNLLRKFYNALDMLQEPLEEYLKSHATPPSCIISDKCISWTSTTATRFNIPRLVFHGMSCFSLLSSHNIKLSNAHLSVNSDSQPFVIPGLPQRVIEITRAQLPGAFVALPDLDDFRDKMVEAEMSAYGIVVNSFEELEQGCAGEYEKVMNKRVWCIGPVSLCNKESLDKFERGNKPSIEEKQCLEWLNLMEQRSVIYVCLGSLCRLVPSQLIELGLALEASNRPFIWVVKTIGENFSEVEKWLEDENFEERVKGRGLLIKGWAPQILILSHPSIGGFLTHCGWNSTIESVCSGVPMITWPLFAEQFLNEKCIVEVLKIGVRIGVEVPVRFGDEKKGGVLVKKIQIMEAIEMIMEGGEEGDKRRSGVTELGNIARRALEEEGSSRFNISCLIQDVMKH*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo