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Report for Sequence Feature Glyma10g06855

Feature Type:gene_model
Chromosome:Gm10
Start:5590393
stop:5598015
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma10g06855
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G22620AT Annotation by Michelle Graham. TAIR10: Phosphoinositide phosphatase family protein | chr1:7997889-8002787 REVERSE LENGTH=912 SoyBaseE_val: 5.00E-117ISS
GO:0006487GO-bp Annotation by Michelle Graham. GO Biological Process: protein N-linked glycosylation SoyBaseN/AISS
GO:0007010GO-bp Annotation by Michelle Graham. GO Biological Process: cytoskeleton organization SoyBaseN/AISS
GO:0007155GO-bp Annotation by Michelle Graham. GO Biological Process: cell adhesion SoyBaseN/AISS
GO:0009826GO-bp Annotation by Michelle Graham. GO Biological Process: unidimensional cell growth SoyBaseN/AISS
GO:0009832GO-bp Annotation by Michelle Graham. GO Biological Process: plant-type cell wall biogenesis SoyBaseN/AISS
GO:0010090GO-bp Annotation by Michelle Graham. GO Biological Process: trichome morphogenesis SoyBaseN/AISS
GO:0010413GO-bp Annotation by Michelle Graham. GO Biological Process: glucuronoxylan metabolic process SoyBaseN/AISS
GO:0032957GO-bp Annotation by Michelle Graham. GO Biological Process: inositol trisphosphate metabolic process SoyBaseN/AISS
GO:0045010GO-bp Annotation by Michelle Graham. GO Biological Process: actin nucleation SoyBaseN/AISS
GO:0045492GO-bp Annotation by Michelle Graham. GO Biological Process: xylan biosynthetic process SoyBaseN/AISS
GO:0046855GO-bp Annotation by Michelle Graham. GO Biological Process: inositol phosphate dephosphorylation SoyBaseN/AISS
GO:0048765GO-bp Annotation by Michelle Graham. GO Biological Process: root hair cell differentiation SoyBaseN/AISS
GO:0071555GO-bp Annotation by Michelle Graham. GO Biological Process: cell wall organization SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0005794GO-cc Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus SoyBaseN/AISS
GO:0004439GO-mf Annotation by Michelle Graham. GO Molecular Function: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity SoyBaseN/AISS
GO:0042578GO-mf Annotation by Michelle Graham. GO Molecular Function: phosphoric ester hydrolase activity SoyBaseN/AISS
PTHR11200Panther INOSITOL 5-PHOSPHATASE JGI ISS
PF02383PFAM SacI homology domain JGI ISS
UniRef100_B9S742UniRef Annotation by Michelle Graham. Most informative UniRef hit: Phosphoinositide 5-phosphatase, putative n=1 Tax=Ricinus communis RepID=B9S742_RICCO SoyBaseE_val: 2.00E-129ISS
UniRef100_I1LNN4UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LNN4_SOYBN SoyBaseE_val: 2.00E-151ISS

Expression Patterns of Glyma10g06855
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma10g06855 not represented in the dataset
Glyma10g06855 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma10g06855 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.10g060600 Wm82.a2.v1IGC As supplied by JGI

References for Glyma10g06855
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Transcripts of Glyma10g06855
>Glyma10g06855.2   sequence type=transcript   gene model=Glyma10g06855   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TTTGGTTTTACATTGTGTCTATCTGGCTAAAATAGTAATGGTTGGATTATTTTTCTTTGTCATGAATTGTTTCTGCAGGTACTTGAAAAGGGGTGTGAATGATCGGGGGAGGGTTGCTAATGATGTTGAGACAGAGCAGATTGTCCTTGATGAAGAATCAGGCTCTTGCAAGGGAAAGATGAGTTCAGTTGTGCAAATGCGTGGATCAATACCACTTTTCTGGTCACAAGAAGCATCCAGATTTAGCCCCAAGCCTGATATAATTTTGCAGAGGTATGATCCAACATACCAAGCAACAAAATTGCATTTTGAAGACCTAGCTAAGAGATATGGCAATCCAATTATTGTTCTGAATTTGATTAAGACAGTTGAGAAACGGCCTCGAGAAATGATGTTGAGGCGTGAATTTGCAAATGATGTTGGGTATCTGAACCAAATTCTACCAGTGGAGAACCATCTTAGATTTATTCACTGGGATTTTCACAAGTTTGCAAAGAGCAAGTCTGCCAATGTTTTGGCAGTTTTAGGAGCTATAGCAAGTGAAGCGCTCGATTTAACTGGTTTTTACTACAGTGGTAAACCCAGCATCATTAAGAGAGCCAACAAGAGCAATCAAACAAGCACAGGGAGGTGAATGGTTCAGTGATCCACTCACCATCAGAGTTTGATGCAGCTTCAATGGCTTTTGAGATCCCTCTCCTAACCTATGGTTAAGAGAACGCGAGTCCTATTTTCCTCGCGCTCTCTTCTCCTCCGTCTAAGGTTCGTGTTCATGACTCTATCTCAACATCTGCAACCCCTGTGACAGCGTGCCACCGTGACACCTCGCCACCATGCCCAGGTATTTTGTTGTAACCTTATTTTCCGCGACTCTGTCAATACCATTGCTGCAACCTTGTTTTTATTTTATCCACACTTTGGTCAAGCATAAGTACCTATTATGTATATGTAATTAGGTAATGTCGTGAATTGCTAAATGCATATTCCAAGCCTTTTAGTTCCATTTTAACTTGGTTTGTCGCTATTCCCTTTATTTTGTGGCTGGCTCAATCAATTACCAGAGCAATTGTACAAGAGTTTTTTTTAAAAAAATTTTAAAGGTATGATTTTTGTTACATTTCCTTTTTCATACATATGATGATTTATTTGATAGCACTGGAGTTACAAATCTTGTTTCACTGGTCAATGATCTAAGGGTTTCTAAAAAAAAAGGACAGTTACAAGGTAAATGTACTATCTGTGTTCTATCTTTAGACGGGAAGATTGTTACTGCTTCCCTTTTTAATAGTACTTGATTCATAGCAAATAGTTGTGGCCATGTGCATGGCAGGCCCTTTGCCCATGTTCTTAAAGCTAGAGATTTTTGTGTAAAAAGGTGTTTGACTTGTATCTATTTTTCATTGGTTCATCTTAGTATTTGAATAGTCATGGACAGGGAATCAACTTGCACTATTCTCAGTTAATAGCAATAAGTAGTATGAGTCATGAGTTCTAATATTATATTTGCTCATGGTAAGTAATATGAATCATCATATTTGTTTTTCCCTAGACCAAAGGGGAGTGATCTCATTAATTGCAACCAAGGGAGAAAGTTGGTTCTCCAATGGTATTTGTATATGATGATCAGATTCAAGAGGTAAGGGATTGAGAGATCGCAGCAAACCTTAAGGCAACTATGGTTAGCCATTTTTTATAACTTCCTTCCTTAACCTTAGTCTTTGTCACTAATGTCTATTTTCCTATAGGGTGATCACTCACAACCCCTCAATTGGGGGGTTTCGGTTTGCTTGTTCTTGGTTGTTGTTTTCTTTTTTAAAGTGCTTCAAATATAATTAGGTAAACATAGACATTTAAACCAATGTGAAGTAACTGTTGTGTGTTAGTATCATTCAGAAACTACTATTTATATGGTTGCTAAAGTGCATACAAAAAAAAGGATTTTCAGGTGTGGGGTCACATGTATTATAGGAGGCAAGTTGGCAGCACCAACTTAACAGTTAACTTAACATCAGTTAAGTTGTGTTTGGTCTCTCACTTGGATCACCAACTTAATAGCTTCCATGTTTTGCTTCTTTTTTTTTTGCATGTTCTCAACTTGTGGACATTCGTGGTTGATAAACTATGGTGACGTTTGAATAGAGTGATAGAGAGGGTGAGGACTATAAGAGGAAGTGGTGGTCAATGTAGGTAGTAACTGGTGAGGTAGTTTTTCTACTGAGGATTAAAATAAAGACTACTACTACTATCACTTGCCACGTTAGGATGGTATTTACATGAATAGTAGCAGATTTAAGTTCTCAACTGCATAACTAATAGATTAAATAAATTGAAGAAAGTTTGCATGATAAATTGAACGCACTTCTTATTTATCTGGTTCTATATTAGCGGAAATGGCAACTTAATGTACTCATTGCTTACAGTGATTATCACGGTTGCTACATAAATATCGCTAGCATCAATTTTGGTACAACCAAATGATGACAAGGACTTAAGGTTTTTTATTATGACCCAAATATTCAATTAAATTAACATAATGAACTAGCTCCAAAAGATTTTTGACAACTATAACCTCGTGGAAGTGTAGAAAATGAGTTATAAGATTAATATTCTTGATTCACTTTGCACTTAGTTTACTATAACTACCACTTATAAGAAAATTGTTCATCAAATTTGTTTATTGTATGAATAAATTTTATGACTCAAACTATAATTCATCACATTGATTCAGCACTTAGTTTAGTATAACTACCACTTATAATTTTTATTGACTGTTTTATGCGTCTTAAATGAGATGAATTTGTTTTGCTAAGATGAGACTTGTTTTGTAGTAATGGTTTGATCACTTGCTTTTCCTCTTGTTGACTGCTTTATGTGTCTCTAATAAGATGAATTTGTTTTGGAAACAAATTCATTGGTTCTTGGTCAGAAATTGGTATGGATTCCACTGCCAAACTCAAATATGTGTAAGGCACCTAAAGCCCTTTAAGTACACTTCTTATATATCTTTGGGTCTGTGTGCATGCTTGGTCTATTTTGTTATTCATAATTTCTCTAGCAAAAATAATTTTTTTAATTATAGGACAACTCCAAAACCTCCAGGCAATATCACTGTCACCAACCCTAACTATTTCCTCTAACTTTGAGGTACATTCCCCTATGGTTTATTATTTGTGCTGACTGATGGTGTGCTTATTGGGTGCATGTGCTACGACATGGTTTTCCATTCTTTGACTTTTACACAATATGTTTGTTTATTTCCATACTCAATTGAGAGAATCGTCTCCATTCTTTGTCTATTTAAAGAGGTTACTTACATGTAGGTTGATTATACTGACATGGTCTTCCAATAAGGTATCTTTGGTTTAAAATAATTTCACCAGTGAAAAGTAGGCATGTTAACATTAGCACTGTTTGTCTGGGACTTGGGACTAGTTGACACCAACGAGTACTCGATGACAATGATTGCTAAGAGACTTAATACAAATATACCTGTATGAGTTGAAGTATTATTCATTTGTTATATCTCTTTTTGTGTGTGGTTGTGTTTTGTTTTTAATCTATTTTAGTAGCAAATATAATATATAAACTTGAAGTTAGTTACATGGAAGCATTCAAATATAAAGTCAAGGGTCATTGTTCATTTCATGTAAAGTCTTACTTGATATATCCAAGTTTGTCTTATATCTCACTTAGCATTCAAATATTTAATTTGTAGGCACTATTTGTCTTCTTGTTTGCGTCGTGATCATGACATTCTAGCAATGGTTTTGTATGTTGTTGTATGTGATTAATGACCAGTGCTTTATATACAAGTTTTGTTCATCATGAGTAAACCTTAAATTCCCGTTTGAGATTGAATATACTGATTCTTGCAAATAGTTTGCATTAATCGTTGTATTGAATCTTGAATTATCCGTTTGGACAGTTTGAGAAGAGTCATATTTTTATGGAAGATTCATACGTTAAGGTTAACATTATTTTGTTGAATTTGATGAAATTTCGGAATAATGCATTTCTAGTTGTTCTCTGAGTGCATACTCCTATTTTATATAAGTACCCAAAAAAAAAACAATAGTTAAAAATGCAAATGAGAAGTATAACAATTAAGAATCAAAATATAAATAATATATATTTTAAATATCATCAAACCAAATTCACATAACATTTTTTTTATAAAAGATATATAATGTATTTTTTTACTTTTAGTGCCTTTTCTCTTGCTATCTTTAAATTTATTTCTTAAAATTAAGATTTTTGAGTAATGTGTTATCTATATCAAGTTATTTTATAATGTGTAAGTAAATTAATGATGTATAAGAGGAATTAGCTTATACTGATGTAAGACTTTAGTACTC

>Glyma10g06855.3   sequence type=transcript   gene model=Glyma10g06855   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TTTGGTTTTACATTGTGTCTATCTGGCTAAAATAGTAATGGTTGGATTATTTTTCTTTGTCATGAATTGTTTCTGCAGGTACTTGAAAAGGGGTGTGAATGATCGGGGGAGGGTTGCTAATGATGTTGAGACAGAGCAGATTGTCCTTGATGAAGAATCAGGCTCTTGCAAGGGAAAGATGAGTTCAGTTGTGCAAATGCGTGGATCAATACCACTTTTCTGGTCACAAGAAGCATCCAGATTTAGCCCCAAGCCTGATATAATTTTGCAGAGGTATGATCCAACATACCAAGCAACAAAATTGCATTTTGAAGACCTAGCTAAGAGATATGGCAATCCAATTATTGTTCTGAATTTGATTAAGACAGTTGAGAAACGGCCTCGAGAAATGATGTTGAGGCGTGAATTTGCAAATGATGTTGGGTATCTGAACCAAATTCTACCAGTGGAGAACCATCTTAGATTTATTCACTGGGATTTTCACAAGTTTGCAAAGAGTCTGCCAATGTTTTGGCAGTTTTAGGAGCTATAGCAAGTGAAGCGCTCGATTTAACTGGTTTTTACTACAGTGGTAAACCCAGCATCATTAAGAGAGCCAACAAGAGCAATCAAACAAGCACAGGGAGGGATACTTCACTGAGAGATCTGAGAGCTAGTTCTGTGGATCTTGTGAGGATTGGGAACAGTAATGAAATGATAAATTCTGTGGTTAATCAAGACAAAGAGACTGACATGAA
Coding sequences of Glyma10g06855
>Glyma10g06855.1   sequence type=CDS   gene model=Glyma10g06855   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTTGGATTATTTTTCTTTGTCATGAATTGTTTCTGCAGGTACTTGAAAAGGGGTGTGAATGATCGGGGGAGGGTTGCTAATGATGTTGAGACAGAGCAGATTGTCCTTGATGAAGAATCAGGCTCTTGCAAGGGAAAGATGAGTTCAGTTGTGCAAATGCGTGGATCAATACCACTTTTCTGGTCACAAGAAGCATCCAGATTTAGCCCCAAGCCTGATATAATTTTGCAGAGGTATGATCCAACATACCAAGCAACAAAATTGCATTTTGAAGACCTAGCTAAGAGATATGGCAATCCAATTATTGTTCTGAATTTGATTAAGACAGTTGAGAAACGGCCTCGAGAAATGATGTTGAGGCGTGAATTTGCAAATGATGTTGGGTATCTGAACCAAATTCTACCAGTGGAGAACCATCTTAGATTTATTCACTGGGATTTTCACAAGTTTGCAAAGAGCAAGTCTGCCAATGTTTTGGCAGTTTTAGGAGCTATAGCAAGTGAAGCGCTCGATTTAACTGGTTTTTACTACAGTGGTAAACCCAGCATCATTAAGAGAGCCAACAAGAGCAATCAAACAAGCACAGGGAGGGATACTTCACTGAGAGATCTGAGAGCTAGTTCTGTGGATCTTGTGAGGATTGGGAACAGTAATGAAATGATAAATTCTGTGGTTAATCAAGACAAAGAGACTGACATGAATTTAAATATAGCTCCATCATTAAGCAAGAAAAGGGTTTTTTGA

>Glyma10g06855.2   sequence type=CDS   gene model=Glyma10g06855   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTTGGATTATTTTTCTTTGTCATGAATTGTTTCTGCAGGTACTTGAAAAGGGGTGTGAATGATCGGGGGAGGGTTGCTAATGATGTTGAGACAGAGCAGATTGTCCTTGATGAAGAATCAGGCTCTTGCAAGGGAAAGATGAGTTCAGTTGTGCAAATGCGTGGATCAATACCACTTTTCTGGTCACAAGAAGCATCCAGATTTAGCCCCAAGCCTGATATAATTTTGCAGAGGTATGATCCAACATACCAAGCAACAAAATTGCATTTTGAAGACCTAGCTAAGAGATATGGCAATCCAATTATTGTTCTGAATTTGATTAAGACAGTTGAGAAACGGCCTCGAGAAATGATGTTGAGGCGTGAATTTGCAAATGATGTTGGGTATCTGAACCAAATTCTACCAGTGGAGAACCATCTTAGATTTATTCACTGGGATTTTCACAAGTTTGCAAAGAGCAAGTCTGCCAATGTTTTGGCAGTTTTAGGAGCTATAGCAAGTGAAGCGCTCGATTTAACTGGTTTTTACTACAGTGGTAAACCCAGCATCATTAAGAGAGCCAACAAGAGCAATCAAACAAGCACAGGGAGGTGA

>Glyma10g06855.3   sequence type=CDS   gene model=Glyma10g06855   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTTGGATTATTTTTCTTTGTCATGAATTGTTTCTGCAGGTACTTGAAAAGGGGTGTGAATGATCGGGGGAGGGTTGCTAATGATGTTGAGACAGAGCAGATTGTCCTTGATGAAGAATCAGGCTCTTGCAAGGGAAAGATGAGTTCAGTTGTGCAAATGCGTGGATCAATACCACTTTTCTGGTCACAAGAAGCATCCAGATTTAGCCCCAAGCCTGATATAATTTTGCAGAGGTATGATCCAACATACCAAGCAACAAAATTGCATTTTGAAGACCTAGCTAAGAGATATGGCAATCCAATTATTGTTCTGAATTTGATTAAGACAGTTGAGAAACGGCCTCGAGAAATGATGTTGAGGCGTGAATTTGCAAATGATGTTGGGTATCTGAACCAAATTCTACCAGTGGAGAACCATCTTAGATTTATTCACTGGGATTTTCACAAGTTTGCAAAGAGTCTGCCAATGTTTTGGCAGTTTTAG
Predicted protein sequences of Glyma10g06855
>Glyma10g06855.1   sequence type=predicted peptide   gene model=Glyma10g06855   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVGLFFFVMNCFCRYLKRGVNDRGRVANDVETEQIVLDEESGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYQATKLHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFANDVGYLNQILPVENHLRFIHWDFHKFAKSKSANVLAVLGAIASEALDLTGFYYSGKPSIIKRANKSNQTSTGRDTSLRDLRASSVDLVRIGNSNEMINSVVNQDKETDMNLNIAPSLSKKRVF*

>Glyma10g06855.2   sequence type=predicted peptide   gene model=Glyma10g06855   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVGLFFFVMNCFCRYLKRGVNDRGRVANDVETEQIVLDEESGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYQATKLHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFANDVGYLNQILPVENHLRFIHWDFHKFAKSKSANVLAVLGAIASEALDLTGFYYSGKPSIIKRANKSNQTSTGR*

>Glyma10g06855.3   sequence type=predicted peptide   gene model=Glyma10g06855   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVGLFFFVMNCFCRYLKRGVNDRGRVANDVETEQIVLDEESGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYQATKLHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFANDVGYLNQILPVENHLRFIHWDFHKFAKSLPMFWQF*






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