Glyma10g04801 - SoyBase

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Report for Sequence Feature Glyma10g04801

Feature Type:	gene_model
Chromosome:	Gm10
Start:	3745650
stop:	3745979
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma10g04801

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
PF03372	PFAM	Endonuclease/Exonuclease/phosphatase family	JGI		ISS
UniRef100_A2Q4W5	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Reverse transcriptase-beet retrotransposon, putative n=1 Tax=Medicago truncatula RepID=A2Q4W5_MEDTR	SoyBase	E_val: 2.00E-10	ISS
UniRef100_I1J6G2	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1J6G2_SOYBN	SoyBase	E_val: 1.00E-15	ISS

Expression Patterns of Glyma10g04801

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma10g04801 not represented in the dataset	Glyma10g04801 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma10g04801 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.10g042200	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma10g04801

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma10g04801

Limit To All Plant Sequences

>Glyma10g04801.1   sequence type=CDS   gene model=Glyma10g04801   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGGATCCTAACCTATAACACAAGAGGGTTGGGGTGCTCCATAAAATGGAAGTCAATAAGGAACATTGTTTTAAAGGAAGAGGTGCAACTTTTGTGTGTACAAGAGACAAAAAAAGAGGATGTTACTAAAGTGGTGTGCTATGCAATGTGGGGTAATCATGAAGTAGAGTGGTCTCTCTCACCCTCGGAAGGCTTGTCGAGAGGTGTGTTCTGCCTTTGGGATACCAATTCCTTTTTTAGAGGTTTGGGATACTTGGGGTTGGAAGGGGTTTGGAAGGAAAATGGGATCCAAATGGTGATTGTCAACATATATGACTCACGTGATTGA

Predicted protein sequences of Glyma10g04801

Limit To All Plant Sequences

>Glyma10g04801.1   sequence type=predicted peptide   gene model=Glyma10g04801   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MRILTYNTRGLGCSIKWKSIRNIVLKEEVQLLCVQETKKEDVTKVVCYAMWGNHEVEWSLSPSEGLSRGVFCLWDTNSFFRGLGYLGLEGVWKENGIQMVIVNIYDSRD*

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