Report for Sequence Feature Glyma10g02760
Feature Type: gene_model
Chromosome: Gm10
Start: 1957464
stop: 1967936
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma10g02760
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G03080 AT
Annotation by Michelle Graham. TAIR10: BRI1 suppressor 1 (BSU1)-like 1 | chr4:1359935-1365166 REVERSE LENGTH=881
SoyBase E_val: 0 ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0004721 GO-mf
Annotation by Michelle Graham. GO Molecular Function: phosphoprotein phosphatase activity
SoyBase N/A ISS
GO:0004722 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine phosphatase activity
SoyBase N/A ISS
GO:0005506 GO-mf
Annotation by Michelle Graham. GO Molecular Function: iron ion binding
SoyBase N/A ISS
GO:0005515 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein binding
SoyBase N/A ISS
GO:0016787 GO-mf
Annotation by Michelle Graham. GO Molecular Function: hydrolase activity
SoyBase N/A ISS
GO:0030145 GO-mf
Annotation by Michelle Graham. GO Molecular Function: manganese ion binding
SoyBase N/A ISS
KOG0374
KOG
Serine/threonine specific protein phosphatase PP1, catalytic subunit
JGI ISS
PTHR11668 Panther
SERINE/THREONINE PROTEIN PHOSPHATASE
JGI ISS
PTHR11668:SF17 Panther
CALMODULIN BINDING PROTEIN
JGI ISS
PF00149 PFAM
Calcineurin-like phosphoesterase
JGI ISS
UniRef100_I1JFE9 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Serine/threonine-protein phosphatase n=1 Tax=Glycine max RepID=I1JFE9_SOYBN
SoyBase E_val: 0 ISS
UniRef100_UPI000233D7E2 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233D7E2 related cluster n=1 Tax=unknown RepID=UPI000233D7E2
SoyBase E_val: 0 ISS
Expression Patterns of Glyma10g02760
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma10g02760
Paralog Evidence Comments
Glyma02g17040 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma10g02760 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.10g022700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma10g02760
Coding sequences of Glyma10g02760
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma10g02760.2 sequence type=CDS gene model=Glyma10g02760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGGTCGAAACCGTGGCTGTACCCTGCTCCAACCTATCGAACTATAGAAACTGTCTGGGACACCGATGAAGACGCTCCTGGCCCTCGTTGTGGCCACACCCTCACCGCCGTCGCTGCCACCAAGACTCTAGGCCCCCGCTTGATCTTATTCGGCGGCGCCACCGCCATTGAAGGAGGATCTTCCTCCGCTCCCGGCATTCGATTAGCAGGAGTCACGAATACCGTCCATGCCTATGACGTTCAAAGTAGAAAATGGACTAGTGTTAAACCCGCCGGAGAACCGCCATCTCCCCGGGCTGCTCATGCCGCTGCTGCAGTTGGAACCATGGTTGTTTTTCAGGGTGGGATAGGTCCGGCGGGGCATTCTACCGATGATCTCTATGTGCTTGACTTGACCAATGATAAATACAAATGGCACAGGGTCGTTGTACAAGGGCAAGGACCTGGTCCACGCTATGGCCATGCAATGGACTTGGTTGCTCAGAGATATCTAGTAACTGTCAGCGGAAATGACGGGAAAAGAGTTGTATCTGATGCTTGGGCTTTGGATACTGCTCAAAAACCTTATGTGTGGCAGAAGCTGAACCCAGAAGGTGACAGACCTTCTGCCAGAATGTACGCAACTGCTAGTGCTCGCTCAGATGGAATGTTTTTACTCTGTGGTGGAAGAGACTCTTCTGGAGCTCCACTAGCAGATGCCTATGGACTGCTCATGCATAGGAATGGCCAGTGGGAATGGACCCTTGCACCGGGAGTTTCCCCTTCACCTAGGTATCAACATGCTGCGGTTTTTGTTGGTGCACGATTACATGTTACAGGAGGTGTTCTCAGGGGTGGACGGTCCGTGGAAGGTGAAGCATCCATTGCAGTATTGGACACTGCTGCTGGGGTTTGGTTGGACAGAAATGGCATTGTGTCCTCCTCACGCTCAAACAAAGGTCATGATTATGACCCTCCTTTGGAGCTTATGCGTCGTTGTCGCCATGCAGCAGCAGCTGTTGGTGTTCATATATTTATCTATGGTGGTCTAAGAGGAGATATACTACTAGATGATTTCCTAGTGGCTGAAAATTCGCCATTGCAGCCTGACATTAATTCTTCTGAGAGAGCTTCACCTGTTACAAGCTCCAAACAAAATCAATCTAACTTGACTTATAATGTAACAGCACCAAATTTGGATGGTGGACCAGATACTCCTTCATTTGGTCACTCAGGCATGGACAAAAATTCCTTGGAGAAACTGAGGGAAGCATCAGCTGCTGAAGCTGAGGCAGCGAGTGCTGTCTGGCAAGCTGTGCAGTCTATATCAAGTAATCCAGCTGAAGAAACATCTCTGTCAGATGAAAACTCACAAGCTGCAGAAACAGTTTCAGATGGAAGTGACACTGAGGGAGATGTCCGCCTTCATCCTAGAGCCGTTGTAGTTGCCAAGGAGGCTGTAGGTAACCTAGGTGGAATGGTGAGACAATTATCGCTAGATCAATTTGAAAATGAAAGCAGACGCATGATTCCAGTAAATAATGATTTGCCATATCCTACGAAAAAGTTCACCAGGCAGAAATCTCCTCAGGGTTTACATAAAAAGATAATTTCAACTTTGCTTAGGCCTCGCAACTGGAAAGCTCCTGCAAACAGGCGGTTCTTCTTGGATTCTTATGAAGTGGGTGAACTTTGCTATGCTGCCGAGCAAATATTTATGCATGAACCAACCGTTCTTCAGCTTAAAGCTCCTGTCAAAGTATTTGGTGATCTTCATGGTCAGTTTGGTGATTTGATGCGGCTATTTGATGAATATGGATTTCCTTCTACTGCAGGAGACATCACCTATATTGACTACCTGTTTTTGGGAGATTACGTTGATCGAGGACAGCATAGCTTGGAAACCATTACCTTGCTACTTGCTCTTAAGATCGAATATCCTGAGAATGTTCACTTGATACGGGGAAACCACGAAGCTGCTGACATAAATGCACTATTTGGTTTTCGGATTGAGTGCATTGAAAGAATGGGTGAAAATGATGGGATATGGGCATGGACACGATTCAATCAACTATTTAATTATCTTCCATTAGCTGCTCTTATTGAAAAGAAAATTATCTGCATGCATGGTGGCATTGGAAGATCTATCAATTCAGTAGAAGATATAGAGAAGCTCAAAAGGCCCATAACAATGGATGCAGGATCTATTATTTTAATGGACCTTTTATGGTCTGATCCCACAGAGAATGATAGTGTAGAGGGTTTGAGACCAAATGCTAGAGGCCCAGGGCTTGTCACTTTTGGGCCTGATCGTGTCACAGAATTTTGTAAGAAAAATAAATTGCAGCTCATTATAAGGGCCCATGAGTGTGTCATGGATGGTTTTGAACGATTTGCCCAGGGACAATTAATCACCCTTTTTTCTGCAACCAACTATTGTGGAACTGCGAACAATGCGGGAGCTATACTGGTAGTTGGTAGGGGTTTGGTTGTGGTTCCAAAATTAATTCATCCCATACCACCTCCCCTTCAGTCTCCTGAGACATCTCCTGAGCGTGGTATGGATGAGACATGGATGCAGGAGCTCAATATTCAGAGGCCACCAACTCCTACTCGGGGTCGACCACAGCCTGACCTTGATCGTGGCTCACTAGCATACATATGA
Predicted protein sequences of Glyma10g02760
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma10g02760.2 sequence type=predicted peptide gene model=Glyma10g02760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGSKPWLYPAPTYRTIETVWDTDEDAPGPRCGHTLTAVAATKTLGPRLILFGGATAIEGGSSSAPGIRLAGVTNTVHAYDVQSRKWTSVKPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHAMDLVAQRYLVTVSGNDGKRVVSDAWALDTAQKPYVWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLADAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRSVEGEASIAVLDTAAGVWLDRNGIVSSSRSNKGHDYDPPLELMRRCRHAAAAVGVHIFIYGGLRGDILLDDFLVAENSPLQPDINSSERASPVTSSKQNQSNLTYNVTAPNLDGGPDTPSFGHSGMDKNSLEKLREASAAEAEAASAVWQAVQSISSNPAEETSLSDENSQAAETVSDGSDTEGDVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPVNNDLPYPTKKFTRQKSPQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSINSVEDIEKLKRPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPIPPPLQSPETSPERGMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI*