Report for Sequence Feature Glyma10g01580
Feature Type: gene_model
Chromosome: Gm10
Start: 1150091
stop: 1160317
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma10g01580
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G02020 AT
Annotation by Michelle Graham. TAIR10: SET domain-containing protein | chr4:886693-891743 FORWARD LENGTH=856
SoyBase E_val: 0 ISS
GO:0000956 GO-bp
Annotation by Michelle Graham. GO Biological Process: nuclear-transcribed mRNA catabolic process
SoyBase N/A ISS
GO:0006306 GO-bp
Annotation by Michelle Graham. GO Biological Process: DNA methylation
SoyBase N/A ISS
GO:0006342 GO-bp
Annotation by Michelle Graham. GO Biological Process: chromatin silencing
SoyBase N/A ISS
GO:0006349 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of gene expression by genetic imprinting
SoyBase N/A ISS
GO:0006355 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent
SoyBase N/A ISS
GO:0007267 GO-bp
Annotation by Michelle Graham. GO Biological Process: cell-cell signaling
SoyBase N/A ISS
GO:0009616 GO-bp
Annotation by Michelle Graham. GO Biological Process: virus induced gene silencing
SoyBase N/A ISS
GO:0009960 GO-bp
Annotation by Michelle Graham. GO Biological Process: endosperm development
SoyBase N/A ISS
GO:0010048 GO-bp
Annotation by Michelle Graham. GO Biological Process: vernalization response
SoyBase N/A ISS
GO:0010050 GO-bp
Annotation by Michelle Graham. GO Biological Process: vegetative phase change
SoyBase N/A ISS
GO:0010267 GO-bp
Annotation by Michelle Graham. GO Biological Process: production of ta-siRNAs involved in RNA interference
SoyBase N/A ISS
GO:0016571 GO-bp
Annotation by Michelle Graham. GO Biological Process: histone methylation
SoyBase N/A ISS
GO:0035196 GO-bp
Annotation by Michelle Graham. GO Biological Process: production of miRNAs involved in gene silencing by miRNA
SoyBase N/A ISS
GO:0043687 GO-bp
Annotation by Michelle Graham. GO Biological Process: post-translational protein modification
SoyBase N/A ISS
GO:0045893 GO-bp
Annotation by Michelle Graham. GO Biological Process: positive regulation of transcription, DNA-dependent
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0009506 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma
SoyBase N/A ISS
GO:0003677 GO-mf
Annotation by Michelle Graham. GO Molecular Function: DNA binding
SoyBase N/A ISS
GO:0003700 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding transcription factor activity
SoyBase N/A ISS
GO:0003727 GO-mf
Annotation by Michelle Graham. GO Molecular Function: single-stranded RNA binding
SoyBase N/A ISS
GO:0005515 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein binding
SoyBase N/A ISS
KOG1079
KOG
Transcriptional repressor EZH1
JGI ISS
PTHR22884 Panther
SET DOMAIN PROTEINS
JGI ISS
PTHR22884:SF18 Panther
ENHANCER OF ZESTE, EZH
JGI ISS
PF00856 PFAM
SET domain
JGI ISS
UniRef100_G7ICX6 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Histone-lysine N-methyltransferase EZA1 n=1 Tax=Medicago truncatula RepID=G7ICX6_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI000233C340 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233C340 related cluster n=1 Tax=unknown RepID=UPI000233C340
SoyBase E_val: 0 ISS
Expression Patterns of Glyma10g01580
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma10g01580
Paralog Evidence Comments
Glyma02g01540 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma10g01580 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.10g012600 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma10g01580
Transcripts of Glyma10g01580
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma10g01580.4 sequence type=transcript gene model=Glyma10g01580 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
GTTTGTTTCCGCGGTAGGCCATGTAACCAAACGTGTCAAAACTCAGAAGCAGTTATTTTCTTTCTCTTCGTTCTTACACACACCACCAGAGTGAGTGAGTTATTTCTTTCTCTCACTCTTCTTCTTCCTTTGATCAACTCCCCACACAGCACGGCACAAAAACGATGGTGTCCAAACCTACCGACTCTGCTTCCAAACCTCGAAAACAACATGGAGAGCCAGCAAATGATGCAATTGGAAACTTGTCCCTCAAGATAAATCAGTTGAAAAAGCAAATCCAGGCGGAGAGAATATTGTACATTAAAGAAAAAATTCAGAGCAATGAGAAGAAGCTACAATTTCATATGTCAGGAGTCCTGTCAGAAATATCAACAAGGGGATCTTCACCGCCAGAGGAAAATAGGAAAACTCCAATTCTTTCTTCAAGAATTGACCATCCTTTATGTAAATTCAGTGGTTTCTCTCCAGTCTCAGGAGACAAAGACCACAGCAATCAAGATGCATTATCTGCTACAAGTATCAAAATTCCATATATTGAAACATTACCGCCATATACCTCTTGGATATTTCTAGACAGAAATCAGAGGATGGCAGAAGATCAGTCAGTGGTTGGAAGAAGACGTATATACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAGGAGTTAACAGGACCCGAGGAAGAAAAACATGAATTTTCTGAGGCTGAAGACCGTGTTATATGGATGGCATTTGAGGAATATGGGTTAAACGACGAGGTACTGAATATTGTTAGCGAATTTGTTGGGGGCACCAGTTTAGAAATTCAGGAGAGGTACAAAACTATCAAGGAAAAGAACATTGGCAGGTTGGACCAGCCTTCTGAAAACTCAGGAGAATATGAATCTATTATTGGCATATGTCCAGAGAAAAGCCTGAGTGCCGCATTAGATTCATTTGATAATCTTTTTTGTCGCCGTTGCCTGATTTTTGACTGTCGTCTGCATGGCTGTTCTCAACCTTTAATATATCCTAGTGAAAAGCAGACAGTTTGGTCTGATCCTGAAGGTGACAGGAAACCATGCAGTGATCAGTGTTACCTTCAGTTAAAGGTAGTAAAAAATGTGACAGAAGATTCAACTTCTGGGTCTGATCAGAATAAGAGAACTACAATTACAGAAGAGGCAGATGTGAAATTGGCTCCCTCCATTATAGAGGAACCTAGTAATCAGAGTATAGCACCTTTTCCAACAGAAGTTGATTGTCTTGGATCTCTTAATTTAAATGTTCCTATCTCAGTGAGTGTGGAAAAATGGAAAGTCCCAAATCAGTCAGACACAGCACTCCGTGACTCATCACTCCCTCCTGATGATTCTCAGCATTCTTATAAAAAGCTGAAGACAATATCTGATGATGTAGTTACTGCAAATAGTGATTCTAGCAAGAACATAAATTTTGGTGCATGTGATGAAAGTATACATACAATTACTAGTGGACTTTTGGACAAATCTGTTAAAGATAATTCAAATAAATTAATAGATTCTTCTAGCACTTGCTGTAGTGATGAGCAGGACAAAAGTATTGGGGATGGACCAAAAGATCCTACAAATAAGACAGAATTTAAGAAGTTGTCCAATTCAATGGAAGGGAAAGTTGATGGGATGCTAAGGGTTTCAGATTGGAAACCTCTGGAAAAAGAATTATACTTAAAGGGAGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCAAGGAACTTACTTTCTGGCCTGAAGACTTGTATGGAAATATCTAGTTACATGCATTCTGGAGGAGTGTCAATGCCCCATGGATCTATTGTTGCTCCTAGTTCAATCATGGAAGACAAGGGAAAATTTGATGCAGAGTGCACAGACCAGGAGATGCCATCTAGGTCACGGTTGCTGAGGAAAAGGGGTAAAACAAGGAAATTTAAATATTCTTGGAAATCTGCTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACACCATGTGGATGTCAGTCAATGTGTGGAAAGGAATGTACTTGTGTTAATGGTGGAACTTGCTGTGAGAAATATTGCGGTTGTTCTAAAAGCTGCAAAAATCGGTTTAGAGGATGCCATTGTGCCAAGAGTCAGTGTAGAAGTCGACAATGCCCATGCTTTGCTGCAGGACGGGAATGTGACCCAGATGTCTGTCGGAATTGCTGGGTTAGTTGTGGGGATGGTTCATTAGGGGAGCCACCTCGACGTGGAGAAGGGCAATGTGGAAATATGAGGCTTCTATTAAGACAACAACAGAGGATTCTCTTGTCAAAGTCTGATGTTGCAGGATGGGGAGCCTTCTTGAAGAACCCAGTAAACAAAAATGATTACTTAGGAGAGTACACAGGAGAACTGATCTCCCACCGAGAAGCAGATAAACGTGGGAAAATATATGATCGTGCCAACTCGTCTTTCCTTTTTGACTTGAATGATCAGTATGTTCTTGATGCTTATCGCAAAGGAGACAAGTTAAAATTTGCAAACCACTCGTCAAACCCCAATTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTTGCCAAGGAACACATCGATGCTAGTGAGGAGCTCTTCTATGATTACCGTTATGGTCCAGATCAAGCACCACCATGGGCACGTAAACCTGAGGGTTCCAAGAGAGACGAATCAACAGCTTCTCAAGGCAGAGCTAAGAAACACCAGTCTCATTGATGAGCCTGGACCCAAGTCTAGCACATACAGATTTTTGCTTCTACTACTATACTCTATACAAACAAATTTGTGACATCCCATGGGTCAACTGTCACAGAAGGAGATAATAAGTGGTTTGCTGATGCTAATTTGCCATTAAATTATTGGATATGACACAGCTAAAGCAATAAAATGGGCAAGAGACGAAGGCATGAAGCAAATTAATGTTGGCGGCAAGTCGGCAACAAGCTAGTAGAAACTAACCTAGCATGGCATTTCGGCGAACTTGTTCTATTCAAACTTGGTTTTGCTCTTCATTATGTTATGTGATTGTGAGCCATCCAAGGTATTATTAAATATAATAAAATGCTGAGATTTGTGAAATGAAAAACAGATTTAAGATTTTAAGCTGTGTTAGATGTGGAATATACTGTAGCCATCTGATTGAAGGTTATCGTCGTTGACGTTTATCAATCTTAGATGACAACCAATTCAGGGACATTTTATGTTCATTAATATTTATCTATTCAATTTATTAAATAAATAAGTTTATAAATTTTTTAT
>Glyma10g01580.5 sequence type=transcript gene model=Glyma10g01580 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
GTTTGTTTCCGCGGTAGGCCATGTAACCAAACGTGTCAAAACTCAGAAGCAGTTATTTTCTTTCTCTTCGTTCTTACACACACCACCAGAGTGAGTGAGTTATTTCTTTCTCTCACTCTTCTTCTTCCTTTGATCAACTCCCCACACAGCACGGCACAAAAACGATGGTGTCCAAACCTACCGACTCTGCTTCCAAACCTCGAAAACAACATGGAGAGCCAGCAAATGATGCAATTGGAAACTTGTCCCTCAAGATAAATCAGTTGAAAAAGCAAATCCAGGCGGAGAGAATATTGTACATTAAAGTAAGATTGCTATCGGGTTAATGTAGAGATTTTAATAAAGTTCTTATTTGACCTTTTCCATGGAGAGGAAAAAATTCAGAGCAATGAGAAGAAGCTACAATTTCATATGTCAGGAGTCCTGTCAGAAATATCAACAAGGGGATCTTCACCGCCAGAGGAAAATAGGAAAACTCCAATTCTTTCTTCAAGAATTGACCATCCTTTATGTAAATTCAGTGGTTTCTCTCCAGTCTCAGGAGACAAAGACCACAGCAATCAAGATGCATTATCTGCTACAAGTATCAAAATTCCATATATTGAAACATTACCGCCATATACCTCTTGGATATTTCTAGACAGAAATCAGAGGATGGCAGAAGATCAGTCAGTGGTTGGAAGAAGACGTATATACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAGGAGTTAACAGGACCCGAGGAAGAAAAACATGAATTTTCTGAGGCTGAAGACCGTGTTATATGGATGGCATTTGAGGAATATGGGTTAAACGACGAGGTACTGAATATTGTTAGCGAATTTGTTGGGGGCACCAGTTTAGAAATTCAGGAGAGGTACAAAACTATCAAGGAAAAGAACATTGGCAGGTTGGACCAGCCTTCTGAAAACTCAGGAGAATATGAATCTATTATTGGCATATGTCCAGAGAAAAGCCTGAGTGCCGCATTAGATTCATTTGATAATCTTTTTTGTCGCCGTTGCCTGATTTTTGACTGTCGTCTGCATGGCTGTTCTCAACCTTTAATATATCCTAGTGAAAAGCAGACAGTTTGGTCTGATCCTGAAGGTGACAGGAAACCATGCAGTGATCAGTGTTACCTTCAGCAGTTAAAGGTAGTAAAAAATGTGACAGAAGATTCAACTTCTGGGTCTGATCAGAATAAGAGAACTACAATTACAGAAGAGGCAGATGTGAAATTGGCTCCCTCCATTATAGAGGAACCTAGTAATCAGAGTATAGCACCTTTTCCAACAGAAGTTGATTGTCTTGGATCTCTTAATTTAAATGTTCCTATCTCAGTGAGTGTGGAAAAATGGAAAGTCCCAAATCAGTCAGACACAGCACTCCGTGACTCATCACTCCCTCCTGATGATTCTCAGCATTCTTATAAAAAGCTGAAGACAATATCTGATGATGTAGTTACTGCAAATAGTGATTCTAGCAAGAACATAAATTTTGGTGCATGTGATGAAAGTATACATACAATTACTAGTGGACTTTTGGACAAATCTGTTAAAGATAATTCAAATAAATTAATAGATTCTTCTAGCACTTGCTGTAGTGATGAGCAGGACAAAAGTATTGGGGATGGACCAAAAGATCCTACAAATAAGACAGAATTTAAGAAGTTGTCCAATTCAATGGAAGGGAAAGTTGATGGGATGCTAAGGGTTTCAGATTGGAAACCTCTGGAAAAAGAATTATACTTAAAGGGAGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCAAGGAACTTACTTTCTGGCCTGAAGACTTGTATGGAAATATCTAGTTACATGCATTCTGGAGGAGTGTCAATGCCCCATGGATCTATTGTTGCTCCTAGTTCAATCATGGAAGACAAGGGAAAATTTGATGCAGAGTGCACAGACCAGGAGATGCCATCTAGGTCACGGTTGCTGAGGAAAAGGGGTAAAACAAGGAAATTTAAATATTCTTGGAAATCTGCTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACACCATGTGGATGTCAGTCAATGTGTGGAAAGGAATGTACTTGTGTTAATGGTGGAACTTGCTGTGAGAAATATTGCGGTTGTTCTAAAAGCTGCAAAAATCGGTTTAGAGGATGCCATTGTGCCAAGAGTCAGTGTAGAAGTCGACAATGCCCATGCTTTGCTGCAGGACGGGAATGTGACCCAGATGTCTGTCGGAATTGCTGGGTTAGTTGTGGGGATGGTTCATTAGGGGAGCCACCTCGACGTGGAGAAGGGCAATGTGGAAATATGAGGCTTCTATTAAGACAACAACAGAGGATTCTCTTGTCAAAGTCTGATGTTGCAGGATGGGGAGCCTTCTTGAAGAACCCAGTAAACAAAAATGATTACTTAGGAGAGTACACAGGAGAACTGATCTCCCACCGAGAAGCAGATAAACGTGGGAAAATATATGATCGTGCCAACTCGTCTTTCCTTTTTGACTTGAATGATCAGTATGTTCTTGATGCTTATCGCAAAGGAGACAAGTTAAAATTTGCAAACCACTCGTCAAACCCCAATTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTTGCCAAGGAACACATCGATGCTAGTGAGGAGCTCTTCTATGATTACCGTTATGGTCCAGATCAAGCACCACCATGGGCACGTAAACCTGAGGGTTCCAAGAGAGACGAATCAACAGCTTCTCAAGGCAGAGCTAAGAAACACCAGTCTCATTGATGAGCCTGGACCCAAGTCTAGCACATACAGATTTTTGCTTCTACTACTATACTCTATACAAACAAATTTGTGACATCCCATGGGTCAACTGTCACAGAAGGAGATAATAAGTGGTTTGCTGATGCTAATTTGCCATTAAATTATTGGATATGACACAGCTAAAGCAATAAAATGGGCAAGAGACGAAGGCATGAAGCAAATTAATGTTGGCGGCAAGTCGGCAACAAGCTAGTAGAAACTAACCTAGCATGGCATTTCGGCGAACTTGTTCTATTCAAACTTGGTTTTGCTCTTCATTATGTTATGTGATTGTGAGCCATCCAAGGTATTATTAAATATAATAAAATGCTGAGATTTGTGAAATGAAAAACAGATTTAAGATTTTAAGCTGTGTTAGATGTGGAATATACTGTAGCCATCTGATTGAAGGTTATCGTCGTTGACGTTTATCAATCTTAGATGACAACCAATTCAGGGACATTTTATGTTCATTAATATTTATCTATTCAATTTATTAAATAAATAAGTTTATAAATTTTTTAT
Coding sequences of Glyma10g01580
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma10g01580.3 sequence type=CDS gene model=Glyma10g01580 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGTCCAAACCTACCGACTCTGCTTCCAAACCTCGAAAACAACATGGAGAGCCAGCAAATGATGCAATTGGAAACTTGTCCCTCAAGATAAATCAGTTGAAAAAGCAAATCCAGGCGGAGAGAATATTGTACATTAAAGAAAAAATTCAGAGCAATGAGAAGAAGCTACAATTTCATATGTCAGGAGTCCTGTCAGAAATATCAACAAGGGGATCTTCACCGCCAGAGGAAAATAGGAAAACTCCAATTCTTTCTTCAAGAATTGACCATCCTTTATGTAAATTCAGTGGTTTCTCTCCAGTCTCAGGAGACAAAGACCACAGCAATCAAGATGCATTATCTGCTACAAGTATCAAAATTCCATATATTGAAACATTACCGCCATATACCTCTTGGATATTTCTAGACAGAAATCAGAGGATGGCAGAAGATCAGTCAGTGGTTGGAAGAAGACGTATATACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAGGAGTTAACAGGACCCGAGGAAGAAAAACATGAATTTTCTGAGGCTGAAGACCGTGTTATATGGATGGCATTTGAGGAATATGGGTTAAACGACGAGGTACTGAATATTGTTAGCGAATTTGTTGGGGGCACCAGTTTAGAAATTCAGGAGAGGTACAAAACTATCAAGGAAAAGAACATTGGCAGGTTGGACCAGCCTTCTGAAAACTCAGGAGAATATGAATCTATTATTGGCATATGTCCAGAGAAAAGCCTGAGTGCCGCATTAGATTCATTTGATAATCTTTTTTGTCGCCGTTGCCTGATTTTTGACTGTCGTCTGCATGGCTGTTCTCAACCTTTAATATATCCTAGTGAAAAGCAGACAGTTTGGTCTGATCCTGAAGGTGACAGGAAACCATGCAGTGATCAGTGTTACCTTCAGCAGTTAAAGGTAGTAAAAAATGTGACAGAAGATTCAACTTCTGGGTCTGATCAGAATAAGAGAACTACAATTACAGAAGAGGCAGATGTGAAATTGGCTCCCTCCATTATAGAGGAACCTAGTAATCAGAGTATAGCACCTTTTCCAACAGAAGTTGATTGTCTTGGATCTCTTAATTTAAATGTTCCTATCTCAGTGAGTGTGGAAAAATGGAAAGTCCCAAATCAGTCAGACACAGCACTCCGTGACTCATCACTCCCTCCTGATGATTCTCAGCATTCTTATAAAAAGCTGAAGACAATATCTGATGATGTAGTTACTGCAAATAGTGATTCTAGCAAGAACATAAATTTTGGTGCATGTGATGAAAGTATACATACAATTACTAGTGGACTTTTGGACAAATCTGTTAAAGATAATTCAAATAAATTAATAGATTCTTCTAGCACTTGCTGTAGTGATGAGCAGGACAAAAGTATTGGGGATGGACCAAAAGATCCTACAAATAAGACAGAATTTAAGAAGTTGTCCAATTCAATGGAAGGGAAAGTTGATGGGATGCTAAGGGTTTCAGATTGGAAACCTCTGGAAAAAGAATTATACTTAAAGGGAGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCAAGGAACTTACTTTCTGGCCTGAAGACTTGTATGGAAATATCTAGTTACATGCATTCTGGAGGAGTGTCAATGCCCCATGGATCTATTGTTGCTCCTAGTTCAATCATGGAAGACAAGGGAAAATTTGATGCAGAGTGCACAGACCAGGAGATGCCATCTAGGTCACGGTTGCTGAGGAAAAGGGGTAAAACAAGGAAATTTAAATATTCTTGGAAATCTGCTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACACCATGTGGATGTCAGTCAATGTGTGGAAAGGAATGTACTTGTGTTAATGGTGGAACTTGCTGTGAGAAATATTGCGGTTGTTCTAAAAGCTGCAAAAATCGGTTTAGAGGATGCCATTGTGCCAAGAGTCAGTGTAGAAGTCGACAATGCCCATGCTTTGCTGCAGGACGGGAATGTGACCCAGATGTCTGTCGGAATTGCTGGGTTAGTTGTGGGGATGGTTCATTAGGGGAGCCACCTCGACGTGGAGAAGGGCAATGTGGAAATATGAGGCTTCTATTAAGACAACAACAGAGGATTCTCTTGTCAAAGTCTGATGTTGCAGGATGGGGAGCCTTCTTGAAGAACCCAGTAAACAAAAATGATTACTTAGGAGAGTACACAGGAGAACTGATCTCCCACCGAGAAGCAGATAAACGTGGGAAAATATATGATCGTGCCAACTCGTCTTTCCTTTTTGACTTGAATGATCAGTATGTTCTTGATGCTTATCGCAAAGGAGACAAGTTAAAATTTGCAAACCACTCGTCAAACCCCAATTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTTGCCAAGGAACACATCGATGCTAGTGAGGAGCTCTTCTATGATTACCGTTATGGTCCAGATCAAGCACCACCATGGGCACGTAAACCTGAGGGTTCCAAGAGAGACGAATCAACAGCTTCTCAAGGCAGAGCTAAGAAACACCAGTCTCATTGA
>Glyma10g01580.4 sequence type=CDS gene model=Glyma10g01580 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGTCCAAACCTACCGACTCTGCTTCCAAACCTCGAAAACAACATGGAGAGCCAGCAAATGATGCAATTGGAAACTTGTCCCTCAAGATAAATCAGTTGAAAAAGCAAATCCAGGCGGAGAGAATATTGTACATTAAAGAAAAAATTCAGAGCAATGAGAAGAAGCTACAATTTCATATGTCAGGAGTCCTGTCAGAAATATCAACAAGGGGATCTTCACCGCCAGAGGAAAATAGGAAAACTCCAATTCTTTCTTCAAGAATTGACCATCCTTTATGTAAATTCAGTGGTTTCTCTCCAGTCTCAGGAGACAAAGACCACAGCAATCAAGATGCATTATCTGCTACAAGTATCAAAATTCCATATATTGAAACATTACCGCCATATACCTCTTGGATATTTCTAGACAGAAATCAGAGGATGGCAGAAGATCAGTCAGTGGTTGGAAGAAGACGTATATACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAGGAGTTAACAGGACCCGAGGAAGAAAAACATGAATTTTCTGAGGCTGAAGACCGTGTTATATGGATGGCATTTGAGGAATATGGGTTAAACGACGAGGTACTGAATATTGTTAGCGAATTTGTTGGGGGCACCAGTTTAGAAATTCAGGAGAGGTACAAAACTATCAAGGAAAAGAACATTGGCAGGTTGGACCAGCCTTCTGAAAACTCAGGAGAATATGAATCTATTATTGGCATATGTCCAGAGAAAAGCCTGAGTGCCGCATTAGATTCATTTGATAATCTTTTTTGTCGCCGTTGCCTGATTTTTGACTGTCGTCTGCATGGCTGTTCTCAACCTTTAATATATCCTAGTGAAAAGCAGACAGTTTGGTCTGATCCTGAAGGTGACAGGAAACCATGCAGTGATCAGTGTTACCTTCAGTTAAAGGTAGTAAAAAATGTGACAGAAGATTCAACTTCTGGGTCTGATCAGAATAAGAGAACTACAATTACAGAAGAGGCAGATGTGAAATTGGCTCCCTCCATTATAGAGGAACCTAGTAATCAGAGTATAGCACCTTTTCCAACAGAAGTTGATTGTCTTGGATCTCTTAATTTAAATGTTCCTATCTCAGTGAGTGTGGAAAAATGGAAAGTCCCAAATCAGTCAGACACAGCACTCCGTGACTCATCACTCCCTCCTGATGATTCTCAGCATTCTTATAAAAAGCTGAAGACAATATCTGATGATGTAGTTACTGCAAATAGTGATTCTAGCAAGAACATAAATTTTGGTGCATGTGATGAAAGTATACATACAATTACTAGTGGACTTTTGGACAAATCTGTTAAAGATAATTCAAATAAATTAATAGATTCTTCTAGCACTTGCTGTAGTGATGAGCAGGACAAAAGTATTGGGGATGGACCAAAAGATCCTACAAATAAGACAGAATTTAAGAAGTTGTCCAATTCAATGGAAGGGAAAGTTGATGGGATGCTAAGGGTTTCAGATTGGAAACCTCTGGAAAAAGAATTATACTTAAAGGGAGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCAAGGAACTTACTTTCTGGCCTGAAGACTTGTATGGAAATATCTAGTTACATGCATTCTGGAGGAGTGTCAATGCCCCATGGATCTATTGTTGCTCCTAGTTCAATCATGGAAGACAAGGGAAAATTTGATGCAGAGTGCACAGACCAGGAGATGCCATCTAGGTCACGGTTGCTGAGGAAAAGGGGTAAAACAAGGAAATTTAAATATTCTTGGAAATCTGCTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACACCATGTGGATGTCAGTCAATGTGTGGAAAGGAATGTACTTGTGTTAATGGTGGAACTTGCTGTGAGAAATATTGCGGTTGTTCTAAAAGCTGCAAAAATCGGTTTAGAGGATGCCATTGTGCCAAGAGTCAGTGTAGAAGTCGACAATGCCCATGCTTTGCTGCAGGACGGGAATGTGACCCAGATGTCTGTCGGAATTGCTGGGTTAGTTGTGGGGATGGTTCATTAGGGGAGCCACCTCGACGTGGAGAAGGGCAATGTGGAAATATGAGGCTTCTATTAAGACAACAACAGAGGATTCTCTTGTCAAAGTCTGATGTTGCAGGATGGGGAGCCTTCTTGAAGAACCCAGTAAACAAAAATGATTACTTAGGAGAGTACACAGGAGAACTGATCTCCCACCGAGAAGCAGATAAACGTGGGAAAATATATGATCGTGCCAACTCGTCTTTCCTTTTTGACTTGAATGATCAGTATGTTCTTGATGCTTATCGCAAAGGAGACAAGTTAAAATTTGCAAACCACTCGTCAAACCCCAATTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTTGCCAAGGAACACATCGATGCTAGTGAGGAGCTCTTCTATGATTACCGTTATGGTCCAGATCAAGCACCACCATGGGCACGTAAACCTGAGGGTTCCAAGAGAGACGAATCAACAGCTTCTCAAGGCAGAGCTAAGAAACACCAGTCTCATTGA
>Glyma10g01580.5 sequence type=CDS gene model=Glyma10g01580 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTCAGGAGTCCTGTCAGAAATATCAACAAGGGGATCTTCACCGCCAGAGGAAAATAGGAAAACTCCAATTCTTTCTTCAAGAATTGACCATCCTTTATGTAAATTCAGTGGTTTCTCTCCAGTCTCAGGAGACAAAGACCACAGCAATCAAGATGCATTATCTGCTACAAGTATCAAAATTCCATATATTGAAACATTACCGCCATATACCTCTTGGATATTTCTAGACAGAAATCAGAGGATGGCAGAAGATCAGTCAGTGGTTGGAAGAAGACGTATATACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAGGAGTTAACAGGACCCGAGGAAGAAAAACATGAATTTTCTGAGGCTGAAGACCGTGTTATATGGATGGCATTTGAGGAATATGGGTTAAACGACGAGGTACTGAATATTGTTAGCGAATTTGTTGGGGGCACCAGTTTAGAAATTCAGGAGAGGTACAAAACTATCAAGGAAAAGAACATTGGCAGGTTGGACCAGCCTTCTGAAAACTCAGGAGAATATGAATCTATTATTGGCATATGTCCAGAGAAAAGCCTGAGTGCCGCATTAGATTCATTTGATAATCTTTTTTGTCGCCGTTGCCTGATTTTTGACTGTCGTCTGCATGGCTGTTCTCAACCTTTAATATATCCTAGTGAAAAGCAGACAGTTTGGTCTGATCCTGAAGGTGACAGGAAACCATGCAGTGATCAGTGTTACCTTCAGCAGTTAAAGGTAGTAAAAAATGTGACAGAAGATTCAACTTCTGGGTCTGATCAGAATAAGAGAACTACAATTACAGAAGAGGCAGATGTGAAATTGGCTCCCTCCATTATAGAGGAACCTAGTAATCAGAGTATAGCACCTTTTCCAACAGAAGTTGATTGTCTTGGATCTCTTAATTTAAATGTTCCTATCTCAGTGAGTGTGGAAAAATGGAAAGTCCCAAATCAGTCAGACACAGCACTCCGTGACTCATCACTCCCTCCTGATGATTCTCAGCATTCTTATAAAAAGCTGAAGACAATATCTGATGATGTAGTTACTGCAAATAGTGATTCTAGCAAGAACATAAATTTTGGTGCATGTGATGAAAGTATACATACAATTACTAGTGGACTTTTGGACAAATCTGTTAAAGATAATTCAAATAAATTAATAGATTCTTCTAGCACTTGCTGTAGTGATGAGCAGGACAAAAGTATTGGGGATGGACCAAAAGATCCTACAAATAAGACAGAATTTAAGAAGTTGTCCAATTCAATGGAAGGGAAAGTTGATGGGATGCTAAGGGTTTCAGATTGGAAACCTCTGGAAAAAGAATTATACTTAAAGGGAGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCAAGGAACTTACTTTCTGGCCTGAAGACTTGTATGGAAATATCTAGTTACATGCATTCTGGAGGAGTGTCAATGCCCCATGGATCTATTGTTGCTCCTAGTTCAATCATGGAAGACAAGGGAAAATTTGATGCAGAGTGCACAGACCAGGAGATGCCATCTAGGTCACGGTTGCTGAGGAAAAGGGGTAAAACAAGGAAATTTAAATATTCTTGGAAATCTGCTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACACCATGTGGATGTCAGTCAATGTGTGGAAAGGAATGTACTTGTGTTAATGGTGGAACTTGCTGTGAGAAATATTGCGGTTGTTCTAAAAGCTGCAAAAATCGGTTTAGAGGATGCCATTGTGCCAAGAGTCAGTGTAGAAGTCGACAATGCCCATGCTTTGCTGCAGGACGGGAATGTGACCCAGATGTCTGTCGGAATTGCTGGGTTAGTTGTGGGGATGGTTCATTAGGGGAGCCACCTCGACGTGGAGAAGGGCAATGTGGAAATATGAGGCTTCTATTAAGACAACAACAGAGGATTCTCTTGTCAAAGTCTGATGTTGCAGGATGGGGAGCCTTCTTGAAGAACCCAGTAAACAAAAATGATTACTTAGGAGAGTACACAGGAGAACTGATCTCCCACCGAGAAGCAGATAAACGTGGGAAAATATATGATCGTGCCAACTCGTCTTTCCTTTTTGACTTGAATGATCAGTATGTTCTTGATGCTTATCGCAAAGGAGACAAGTTAAAATTTGCAAACCACTCGTCAAACCCCAATTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTTGCCAAGGAACACATCGATGCTAGTGAGGAGCTCTTCTATGATTACCGTTATGGTCCAGATCAAGCACCACCATGGGCACGTAAACCTGAGGGTTCCAAGAGAGACGAATCAACAGCTTCTCAAGGCAGAGCTAAGAAACACCAGTCTCATTGA
Predicted protein sequences of Glyma10g01580
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma10g01580.3 sequence type=predicted peptide gene model=Glyma10g01580 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVSKPTDSASKPRKQHGEPANDAIGNLSLKINQLKKQIQAERILYIKEKIQSNEKKLQFHMSGVLSEISTRGSSPPEENRKTPILSSRIDHPLCKFSGFSPVSGDKDHSNQDALSATSIKIPYIETLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTGPEEEKHEFSEAEDRVIWMAFEEYGLNDEVLNIVSEFVGGTSLEIQERYKTIKEKNIGRLDQPSENSGEYESIIGICPEKSLSAALDSFDNLFCRRCLIFDCRLHGCSQPLIYPSEKQTVWSDPEGDRKPCSDQCYLQQLKVVKNVTEDSTSGSDQNKRTTITEEADVKLAPSIIEEPSNQSIAPFPTEVDCLGSLNLNVPISVSVEKWKVPNQSDTALRDSSLPPDDSQHSYKKLKTISDDVVTANSDSSKNINFGACDESIHTITSGLLDKSVKDNSNKLIDSSSTCCSDEQDKSIGDGPKDPTNKTEFKKLSNSMEGKVDGMLRVSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEISSYMHSGGVSMPHGSIVAPSSIMEDKGKFDAECTDQEMPSRSRLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKECTCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLSKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDESTASQGRAKKHQSH*
>Glyma10g01580.4 sequence type=predicted peptide gene model=Glyma10g01580 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVSKPTDSASKPRKQHGEPANDAIGNLSLKINQLKKQIQAERILYIKEKIQSNEKKLQFHMSGVLSEISTRGSSPPEENRKTPILSSRIDHPLCKFSGFSPVSGDKDHSNQDALSATSIKIPYIETLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTGPEEEKHEFSEAEDRVIWMAFEEYGLNDEVLNIVSEFVGGTSLEIQERYKTIKEKNIGRLDQPSENSGEYESIIGICPEKSLSAALDSFDNLFCRRCLIFDCRLHGCSQPLIYPSEKQTVWSDPEGDRKPCSDQCYLQLKVVKNVTEDSTSGSDQNKRTTITEEADVKLAPSIIEEPSNQSIAPFPTEVDCLGSLNLNVPISVSVEKWKVPNQSDTALRDSSLPPDDSQHSYKKLKTISDDVVTANSDSSKNINFGACDESIHTITSGLLDKSVKDNSNKLIDSSSTCCSDEQDKSIGDGPKDPTNKTEFKKLSNSMEGKVDGMLRVSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEISSYMHSGGVSMPHGSIVAPSSIMEDKGKFDAECTDQEMPSRSRLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKECTCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLSKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDESTASQGRAKKHQSH*
>Glyma10g01580.5 sequence type=predicted peptide gene model=Glyma10g01580 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MSGVLSEISTRGSSPPEENRKTPILSSRIDHPLCKFSGFSPVSGDKDHSNQDALSATSIKIPYIETLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTGPEEEKHEFSEAEDRVIWMAFEEYGLNDEVLNIVSEFVGGTSLEIQERYKTIKEKNIGRLDQPSENSGEYESIIGICPEKSLSAALDSFDNLFCRRCLIFDCRLHGCSQPLIYPSEKQTVWSDPEGDRKPCSDQCYLQQLKVVKNVTEDSTSGSDQNKRTTITEEADVKLAPSIIEEPSNQSIAPFPTEVDCLGSLNLNVPISVSVEKWKVPNQSDTALRDSSLPPDDSQHSYKKLKTISDDVVTANSDSSKNINFGACDESIHTITSGLLDKSVKDNSNKLIDSSSTCCSDEQDKSIGDGPKDPTNKTEFKKLSNSMEGKVDGMLRVSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEISSYMHSGGVSMPHGSIVAPSSIMEDKGKFDAECTDQEMPSRSRLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKECTCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLSKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDESTASQGRAKKHQSH*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
