Glyma10g00710 - SoyBase

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Report for Sequence Feature Glyma10g00710

Feature Type:	gene_model
Chromosome:	Gm10
Start:	457447
stop:	461847
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma10g00710

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G14310	AT	Annotation by Michelle Graham. TAIR10: Transducin/WD40 repeat-like superfamily protein \| chr4:8237137-8240324 REVERSE LENGTH=893	SoyBase	E_val: 0	ISS
GO:0008150	GO-bp	Annotation by Michelle Graham. GO Biological Process: biological process	SoyBase	N/A	ISS
GO:0005618	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cell wall	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0005515	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein binding	SoyBase	N/A	ISS
UniRef100_F4JUQ1	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Transducin/WD40 domain-containing protein-like protein n=1 Tax=Arabidopsis thaliana RepID=F4JUQ1_ARATH	SoyBase	E_val: 0	ISS
UniRef100_UPI000233C218	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233C218 related cluster n=1 Tax=unknown RepID=UPI000233C218	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma10g00710

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma10g00710 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.10g004700	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma10g00710

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma10g00710

Limit To All Plant Sequences

>Glyma10g00710.2   sequence type=CDS   gene model=Glyma10g00710   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCCACTCGCCGCGGCGGCGGAGATGACGGCGCCACCGTCCGTCCCCGCCCCCTCTCCGCCTCTCGCCGCTTCCCTTCCCCTTCCCTTCCTCTCCAGAAAGAAAACACCAACCCTCGCCGCTCCACTTCCCGTTCCAACCCTCGCGGCCGCAGCTCCAGCCCCTCCGATCTCCCCCGCCCCACCGTCCAAAAGCCCACCCCCACCGCCCTAATTCCCAGACTTTCCTCCACCCAAAAGCCCAAACCTTCCACCACCACCACCAGATCCAGCCTCGAAAAACTCAACAATAATCACCCCCACAACATAACCACCACCAGCAGGCTTCACGAGAAGCTCGCGTTTCTCGAAGGCAAAGTAAAGCGGATAGCTTCCGACATAAAGAAGACTAAAGAAATGCTCGACATGAACAACCCTGATGCCTCCAAGGTGATCCTCTCCGACATTCAAGACAAGATCTCCGGAATCGAGAAGGCCATGGTTCATGTCGTTTCTAACAAGGAAACCAAAAATGACGCGGTTCAAGTCGCTGCTAAAGACAAGAGCTTGGCGAAAGGGTTGAAATTGAACACCGAGGAACTTGAGGCAAGGTTGTTCCCTCACCAGAAACTGCTTCGTGACAGGACAGTGGTTAAGGATAAGGGCTCTGTGGTGGAGGAAGAGAAGGTGCTGAGTCCGGTTGACGATAATTTGGTTGCGGTCGAGTTTTTGGCTCTGATTGATAAAGAGAAAGAGAAGGTGAATGCTGGGGAGGATGTGAAGGAAAGGGGTGGAGGTGGGAATGTTAAGAGGAACAATGGCATTGATGTGCTGCTCGGGGCGGATGAGAAGCTCGAGGATTTCGATGATGATCAGGAGAATAAGGAGAACAAGGAAGAGACGCTTGTTGAGGAGGAGATGGATGAGGCTTTCAATTTTAGGCTGAATGGGATTGGTACCAATGTTGCTACCGGTGGCTGGTTCGTCAACGAAGGCGAGGCTGTCCTCCTTGCTCACCTTGATGGTTCTTGTACCTATTATGATATTACCAATTGTGAGGAAAAAGCTGTATATATGCCACCCCCAGAAGTTTCACCCAACATATGGAGAGATTGTTGGGTAGTTCGTGCCCCTGGTTCCGATGGTTGCTCTGGAAGGTTTGTAGTAGCTGCATCTGCTGGCAATACTATGGATTCAGGATTTTGCTCATGGGACTTTTACACCAAAGAAGTGTGTGCTTTACAAGTTGATGCTGGAACAGCCTCCTCAAGAATTGCACTTGGACCCTTACCTAACAATATTAGAAGAAATTCTACATCTAGCATTGTGACAGCAGAAGCTACGAAGTGGTGGTATAGGCCCTGTGGACCTCTCATCGTGTCTACGGCCAGCTCACAGAAAGCTGTGAAGGTTTTTGATGTTCGCGATGGAGAGCAAATAATGAAATGGGATGTTCAGATGCCCGTTTTAACAATGGATTATTCTAGCCCTTTGCAATGGAGGAACAGAGGGAAAGTAGTGGTAGCTGAATCTGAATCCATTTCTTTGTGGGATGTGAACTCACTCACTCCTCAAGCTCTGCTCTCTGTTCCTACAGGCGGGCAAAAAGTTTCCGCTCTCCACGTGAGCAACACTGATGCAGAATTGGGTGGAGGGGTTCGCAAAAGAGTAAGTTCATCTGATGCTGAAGGAAATGATGGTGTGTTCTGCACCTCAGATTCTATTAACGTGTTGGACTTTCGCCAGCCATCTGGTGTAGGTCTCAGGATATCAAAACACGGTGTCAATGTGCAATCAGTTTTCTCTCGTGGGGATTCTGTGTTCCTTGGTTGCTCCAGCACAAGTTCAACGGGCAAGAAGCAGACCTCACTGCTGCAACAATTTTCACTGCGCAGACAAGGACTTTTTACAACCTATGCTCTTCCAGAATCCAATGCACACTCACACCATGCAGCAATCTCCCAAGTTTGGGGCAATTCTGACTTTGTCATGGGTGTTTGTGGCCTAGGACTGTTTGTGTTTGATACAGTGAAAGATGATGCACTAAGGGTTCTCAACATGGATTACTCTAGTGATCAAAGTTTTAGAGAAGTTATTGGTCCGGATGACATGTATTGTCCTTCCTTTGATTATCTTGGATCTCGTGCTCTTCTGATATCAAGAGATCGACCAGCTATGTGGAGGCATCTGATAGTTTGA

Predicted protein sequences of Glyma10g00710

Limit To All Plant Sequences

>Glyma10g00710.2   sequence type=predicted peptide   gene model=Glyma10g00710   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MATRRGGGDDGATVRPRPLSASRRFPSPSLPLQKENTNPRRSTSRSNPRGRSSSPSDLPRPTVQKPTPTALIPRLSSTQKPKPSTTTTRSSLEKLNNNHPHNITTTSRLHEKLAFLEGKVKRIASDIKKTKEMLDMNNPDASKVILSDIQDKISGIEKAMVHVVSNKETKNDAVQVAAKDKSLAKGLKLNTEELEARLFPHQKLLRDRTVVKDKGSVVEEEKVLSPVDDNLVAVEFLALIDKEKEKVNAGEDVKERGGGGNVKRNNGIDVLLGADEKLEDFDDDQENKENKEETLVEEEMDEAFNFRLNGIGTNVATGGWFVNEGEAVLLAHLDGSCTYYDITNCEEKAVYMPPPEVSPNIWRDCWVVRAPGSDGCSGRFVVAASAGNTMDSGFCSWDFYTKEVCALQVDAGTASSRIALGPLPNNIRRNSTSSIVTAEATKWWYRPCGPLIVSTASSQKAVKVFDVRDGEQIMKWDVQMPVLTMDYSSPLQWRNRGKVVVAESESISLWDVNSLTPQALLSVPTGGQKVSALHVSNTDAELGGGVRKRVSSSDAEGNDGVFCTSDSINVLDFRQPSGVGLRISKHGVNVQSVFSRGDSVFLGCSSTSSTGKKQTSLLQQFSLRRQGLFTTYALPESNAHSHHAAISQVWGNSDFVMGVCGLGLFVFDTVKDDALRVLNMDYSSDQSFREVIGPDDMYCPSFDYLGSRALLISRDRPAMWRHLIV*

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