Report for Sequence Feature Glyma10g00630
Feature Type: gene_model
Chromosome: Gm10
Start: 386683
stop: 389158
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma10g00630
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G14750 AT
Annotation by Michelle Graham. TAIR10: IQ-domain 19 | chr4:8470449-8471903 FORWARD LENGTH=387
SoyBase E_val: 3.00E-84 ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0005516 GO-mf
Annotation by Michelle Graham. GO Molecular Function: calmodulin binding
SoyBase N/A ISS
PTHR13140 Panther
MYOSIN
JGI ISS
PTHR13140:SF72 Panther
MYOSIN-IX A, B
JGI ISS
PF00612 PFAM
IQ calmodulin-binding motif
JGI ISS
UniRef100_B9RTL0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTL0_RICCO
SoyBase E_val: 1.00E-148 ISS
UniRef100_I1L7F0 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1L7F0_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma10g00630
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma10g00630 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.10g003700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma10g00630
Coding sequences of Glyma10g00630
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma10g00630.1 sequence type=CDS gene model=Glyma10g00630 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGGAGGACAGGGAAATGGCTCAGGAGCTTGTTGACAGGGAAGAGATCAGACAGAGAGAAAGAGAAGGAAAAGGAAAAATGTGGCACCAACATGTGTTTGTTGAATGGCATCACAAGCACAACAGAAACAGAAAATCCAACCACACCAGTTTCAACAACAACAACCACCAAGGAGAAAAGAAGGTGGAGTTTCAGGAGATCACCAGCTTCCAGGGAACTGAATCTTGCAGAATCTGGTGCCATTGCTTCTTCAGTCACAGTGCAAAATGCTGAGAATGATCAAAGGGAGCATGATCCTGATTCCAATGGGTTGTCAACAAGATGTTCTGAAGAGGCTGCAGCTATTAAAATTCAATCGGTGTTTCGGTCCTACTTGGCAAGAAAGGCACTGTATGCTCTCAGAGGACTAGTGAAGTTGCAGGCATTGGTGAGGGGTCACTTGGTGAGAAAACAGGCCAGGGAGACACTGAGATGCATTCAGGCTTTGGTCATAGCACAAGCCAGGGCTCGTGCTCAGAGGGCGCGGATGGTGTTAGAAGATCAAAACCTATCACCCTACAGAATAACCACTGAGGAAAACTTCTTCATGCTTATGCATAATGAAATGGACAGTGGTTTGGAAGAGAATGCCAAGATTGTGGAGATGGCTGTTTGTGAATCCAAAGGCAACTCAAGAGGAAGAAACAGCGCTGCGAATCGCGAGCCTTCTGATCATAGATTTTCTGCATATTACTCATCAAACGGTTCATACTCAAAGGAGGAAAAGTACAATGCATCATCACCTGCACCATCAACACTGACAGAATTGAGTCCAAGAGCATGCAATGGTCATTTTGAGGAGTGTTCATTCAGCACAGCACAAAGCAGTCCCTATTACTACTCAGAAGAAGTGTCAAGAGTGGATAATAAAATTACAAAGGCTCCATTTGCATTCCCTAAACCAGCATACACAGAACCCATGTCCTATGACTACCCTTTGTTTCCAAACTACATGGCGAACACGGAATCGTCGAGGGCCAAAGCCAGATCACAGAGTGCACCAAAGTCAAGGCCAGATTCGAACGAGAGGCAGCCAAGCCGAAGAAGAGCTTCAGTGGAAGGAAGAAATGTCCCAAGGCCAGTGAGGATGCAAAGGTCATCTTCACATGTTGGTTTCACTGCCCAAAACTACCAATATCCATGCTCAATAAAGCTTGACAGGTCCATAGTCAGTGAGTGTGGCTCTACAAGTACAGTGATCACAAACACAAACTCTAATTACTTCACATGA
Predicted protein sequences of Glyma10g00630
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma10g00630.1 sequence type=predicted peptide gene model=Glyma10g00630 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGRTGKWLRSLLTGKRSDREKEKEKEKCGTNMCLLNGITSTTETENPTTPVSTTTTTKEKRRWSFRRSPASRELNLAESGAIASSVTVQNAENDQREHDPDSNGLSTRCSEEAAAIKIQSVFRSYLARKALYALRGLVKLQALVRGHLVRKQARETLRCIQALVIAQARARAQRARMVLEDQNLSPYRITTEENFFMLMHNEMDSGLEENAKIVEMAVCESKGNSRGRNSAANREPSDHRFSAYYSSNGSYSKEEKYNASSPAPSTLTELSPRACNGHFEECSFSTAQSSPYYYSEEVSRVDNKITKAPFAFPKPAYTEPMSYDYPLFPNYMANTESSRAKARSQSAPKSRPDSNERQPSRRRASVEGRNVPRPVRMQRSSSHVGFTAQNYQYPCSIKLDRSIVSECGSTSTVITNTNSNYFT*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
