Report for Sequence Feature Glyma09g41940
Feature Type: gene_model
Chromosome: Gm09
Start: 46636081
stop: 46640450
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma09g41940
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G23190 AT
Annotation by Michelle Graham. TAIR10: cytochrome P450, family 86, subfamily B, polypeptide 1 | chr5:7803478-7805659 REVERSE LENGTH=559
SoyBase E_val: 0 ISS
GO:0000041 GO-bp
Annotation by Michelle Graham. GO Biological Process: transition metal ion transport
SoyBase N/A ISS
GO:0010345 GO-bp
Annotation by Michelle Graham. GO Biological Process: suberin biosynthetic process
SoyBase N/A ISS
GO:0042761 GO-bp
Annotation by Michelle Graham. GO Biological Process: very long-chain fatty acid biosynthetic process
SoyBase N/A ISS
GO:0055114 GO-bp
Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process
SoyBase N/A ISS
GO:0005783 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: endoplasmic reticulum
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0005506 GO-mf
Annotation by Michelle Graham. GO Molecular Function: iron ion binding
SoyBase N/A ISS
GO:0009055 GO-mf
Annotation by Michelle Graham. GO Molecular Function: electron carrier activity
SoyBase N/A ISS
GO:0016705 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
SoyBase N/A ISS
GO:0019825 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxygen binding
SoyBase N/A ISS
GO:0020037 GO-mf
Annotation by Michelle Graham. GO Molecular Function: heme binding
SoyBase N/A ISS
KOG0157
KOG
Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
JGI ISS
PTHR24296 Panther
FAMILY NOT NAMED
JGI ISS
PF00067 PFAM
Cytochrome P450
JGI ISS
UniRef100_G7JPI5 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Cytochrome P450 n=1 Tax=Medicago truncatula RepID=G7JPI5_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1L784 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1L784_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma09g41940
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma09g41940
Paralog Evidence Comments
Glyma20g00490 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma09g41940 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.09g282700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma09g41940
Coding sequences of Glyma09g41940
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma09g41940.1 sequence type=CDS gene model=Glyma09g41940 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCATCACAACATCTCCAACAATCATTCCTTCATTGTGACCAAATTAGCCACCAACAACATCACCACCACCAACATGAACTTTTTCTCCCTCATTTTTTTCCTCTTGCAACACGTCCACATCTTTGAACTCACCATTGCAACCGCAATGTTCATAGCCCTTAGAGCTTGGCGTTCTAAGAGGCACCATGGCCTACCCATTTGGCCAATCCTTGGAATGCTCCCTTCCCTTCTCTATGGAATCACAACCAACTTGTATGAATGGCTCAGTGAAGTCCTCATCCGCCAAAATGGAACCTTCACATTCCAAGGCCCGTGGTTCGCTAGCCTCGACTGTGTCCTCACCTCCGACCCTCGCAATCTCGAATACCTCCTCAAAACCAAGTTCTCCTCCTTCCCCAAGGGAAGATTCTTCAGGTACACACTTCGTGACCTGCTGGGAAACGGCATATTCAACGCAGACAAGGAGGCATGGCAGCGGCAAAGGAAGACGGTGAGCCTGGAGTTCCACTCCACAATGTTCAGAAACCTAACCGCAGAGTCACTTTTGGAGCTCGTCCACAAAAGACTCTTACCCTTGCTAGAGTCATGTGTGAACAAATCACGTGTCATAGACCTTCAGGATGTTCTACTAAGGCTCACTTTCGACAACGTGTGCATGATAGCTTTTGGCGTTGACCCTGGTTGCTCACAGCCCCACTTGCCAGATATTCCATTCGCCACAGCTTTTGAGGATGCAACTGAAACCTCAATGAGGAGGTTCATCACCCCGGTGTGGATGTGGAAGTTCATGAGGCATCTCAATGTTGGTGTGGAAAAGAGGTTGAAGGAGTCAATAGAGAAGGTTGATGAGTTTGCTGAGAGTGTTATTATGACAAGGAAAAAGGAACTTGCTTTGCAGCATGACAAGTCTGATTTGTTGACTGTGTTCATGAGGCTTAAGGATGAGAATGGAATGGCTTATTCAGATAAATTTTTGAGGGACATTTGTGTCAACTTCATTTTGGCTGGGAGGGACACTTCTTCTGTGGCTTTGAGTTGGTTTTTCTGGCTTTTGCATATGAATCCTCAAGTGGAGGAGAAGATTTTGGCTGAGATTTGCAGGGTGGTGCTTAGTCAAAGGGAAGGGTTAAAGAAGGAAGAGGTTGTTGTTGGGAGTTGTTTGGCATTTAGGCCTGAGGAGATAAAGAAGATGGATTATTTGCATGCTGCCCTTTCAGAAGCTCTCAGGCTATATCCTTCTGTTCCTGTGGATCACAAGGAGGTGGTGGAAGATGTGACTTTCCCAGATGGAACAGTGCTATTGAAGGGGACAAAAGTGATATATTCAATTTATACAATGGGGAGAATGGAGAGCATATGGGGCAAGGATTGCAAAGAATTCAAGCCAGAAAGGTGGCTAAGAGAGAATGGACACTTCATGAGTGAGTCTGCTTACAAATTCACTGCCTTCAATGGAGGGCCTCGCTTGTGCTTAGGCAAAGACTTTGCATACTATCAAATGAAATATGCTGCAGCCAGCATCATTTTCCGCTACCGTGTTAAGGTGCTGGAGAACCACCCTGTTGTGCCAAAGCTTGCTTTAACTCTATACATGAAGCATGGCTTGAAAGTCAACCTTCAAAGGCGTGATGCAGCAGAAATTGACAAGTACTTCAAAGTTTAG
Predicted protein sequences of Glyma09g41940
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma09g41940.1 sequence type=predicted peptide gene model=Glyma09g41940 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MHHNISNNHSFIVTKLATNNITTTNMNFFSLIFFLLQHVHIFELTIATAMFIALRAWRSKRHHGLPIWPILGMLPSLLYGITTNLYEWLSEVLIRQNGTFTFQGPWFASLDCVLTSDPRNLEYLLKTKFSSFPKGRFFRYTLRDLLGNGIFNADKEAWQRQRKTVSLEFHSTMFRNLTAESLLELVHKRLLPLLESCVNKSRVIDLQDVLLRLTFDNVCMIAFGVDPGCSQPHLPDIPFATAFEDATETSMRRFITPVWMWKFMRHLNVGVEKRLKESIEKVDEFAESVIMTRKKELALQHDKSDLLTVFMRLKDENGMAYSDKFLRDICVNFILAGRDTSSVALSWFFWLLHMNPQVEEKILAEICRVVLSQREGLKKEEVVVGSCLAFRPEEIKKMDYLHAALSEALRLYPSVPVDHKEVVEDVTFPDGTVLLKGTKVIYSIYTMGRMESIWGKDCKEFKPERWLRENGHFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIFRYRVKVLENHPVVPKLALTLYMKHGLKVNLQRRDAAEIDKYFKV*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
