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Report for Sequence Feature Glyma09g41510
Feature Type: gene_model
Chromosome: Gm09
Start: 46180715
stop: 46193814
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma09g41510
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G08850 AT
Annotation by Michelle Graham. TAIR10: HEAT repeat ;WD domain, G-beta repeat protein protein | chr3:2686978-2694911 REVERSE LENGTH=1344
SoyBase E_val: 0 ISS
GO:0000911 GO-bp
Annotation by Michelle Graham. GO Biological Process: cytokinesis by cell plate formation
SoyBase N/A ISS
GO:0006486 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein glycosylation
SoyBase N/A ISS
GO:0006487 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein N-linked glycosylation
SoyBase N/A ISS
GO:0007062 GO-bp
Annotation by Michelle Graham. GO Biological Process: sister chromatid cohesion
SoyBase N/A ISS
GO:0009793 GO-bp
Annotation by Michelle Graham. GO Biological Process: embryo development ending in seed dormancy
SoyBase N/A ISS
GO:0009880 GO-bp
Annotation by Michelle Graham. GO Biological Process: embryonic pattern specification
SoyBase N/A ISS
GO:0010072 GO-bp
Annotation by Michelle Graham. GO Biological Process: primary shoot apical meristem specification
SoyBase N/A ISS
GO:0010228 GO-bp
Annotation by Michelle Graham. GO Biological Process: vegetative to reproductive phase transition of meristem
SoyBase N/A ISS
GO:0010431 GO-bp
Annotation by Michelle Graham. GO Biological Process: seed maturation
SoyBase N/A ISS
GO:0016049 GO-bp
Annotation by Michelle Graham. GO Biological Process: cell growth
SoyBase N/A ISS
GO:0045595 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of cell differentiation
SoyBase N/A ISS
GO:0051301 GO-bp
Annotation by Michelle Graham. GO Biological Process: cell division
SoyBase N/A ISS
GO:0080008 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: CUL4-RING ubiquitin ligase complex
SoyBase N/A ISS
GO:0000166 GO-mf
Annotation by Michelle Graham. GO Molecular Function: nucleotide binding
SoyBase N/A ISS
GO:0005515 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein binding
SoyBase N/A ISS
KOG1517
KOG
Guanine nucleotide binding protein MIP1
JGI ISS
PTHR12848 Panther
FAMILY NOT NAMED
JGI ISS
PTHR12848:SF5 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00400 PFAM
WD domain, G-beta repeat
JGI ISS
UniRef100_G7KW32 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Regulatory-associated protein of mTOR n=1 Tax=Medicago truncatula RepID=G7KW32_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1L744 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1L744_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma09g41510
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma09g41510
Paralog Evidence Comments
Glyma18g44210 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma09g41510 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.09g278500 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma09g41510
Coding sequences of Glyma09g41510
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma09g41510.1 sequence type=CDS gene model=Glyma09g41510 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCATTGGGAGATTTGATGGCCTCTCGCTTTTCCCAATCCACAGTTCTCGTCGTTCCCACCTCTCACAACCACCTCGACGATTCCACCACCGCCTCCTCTTCCTCCTCTGCTGCCGCCGCCGTCGCCGCTCTTAACAACAACAGCAGCAGCAACGACGACGCCGATTTCGCGCACCGCCGCGACTCTGAAGCCGCCATCGCCATCATTAGCAGCGGCAACTACGCCGGGAATGCCGCCACCAGCATGGCCTACCTGCCCCACACCGTCGTCCTGTGCGAGCTCCGCCACGACGCCTTCGAGGCCGCCGTCCCCGCCGGCCCCTCCGACAGCGGCCTCGTCTCCAAGTGGCGACCTAAGGACAGAATGAAGACAGGATGTGTAGCTCTAGTATTATGTTTAAACATTAGTGTCGATCCACCAGATGTAATAAAGATATCCCCTTGTGCCAGAATGGAGTGCTGGATAGATCCTTTTTCTATGGCACCGCAAAAGGCATTGGAGTCAATTGGAAAAACTTTGAGCAGTCAGTATGAAAGATGGCAACCAAAGGCCCGCTATAAATGTCAACTTGATCCGACAGTGGATGAGGTGAAGAAGCTTTGTACTACTTGTCGTAAATATGCAAAGTCGGAAAGAGTTTTATTCCATTACAATGGGCATGGTGTGCCAAAACCAACTGCTAATGGTGAAATTTGGGTCTTCAATAAGAGTTATACACAGTATATTCCCTTACCTATCAATGAACTTGATTCCTGGCTGAAGACCCCATCAATTTATGTTTTTGATTGCTCTGCGGCTGGGATGATTGTGAATTCCTTCATTGAGCTTCATGAGTGGAGTGCTTCCAACTCCTCTGTGTCCCAAAGGGATTGCATTCTGCTTGCAGCATGTGAAGCACATGAGACTTTGCCTCAGAGTGCAGAATTCCCAGCTGATGTATTTACATCTTGCCTTACAACACCTATAAAGATGGCATTGCGATGGTTTTGTACTCGTTCATTACTTCGTGAATCACTTGATTATTCACTTATAGACAAGATCCCTGGCCGTCCAAATGACCGAAAGACACTTCTGGGTGAATTGAATTGGATCTTTACAGCCGTAACTGATACGATTGCCTGGAATGTTCTTCCTCATGATCTTTTTCAGAGACTGTTCAGACAGGATTTGCTTGTTGCAAGTCTGTTTCGAAATTTTCTACTTGCTGAGCGAATCATGCGATCTGCAAATTGTTCTCCTGTCTCTCACCCAATGTTACCTCCGACCCATCAGCATCATATGTGGGATGCATGGGACATGGCTGCTGAGCTCTGCCTCTCTCAACTTCCGTCTTTAGTTGAGGATCCTAATGCTGAATTTCAGCCTAGTACATTTTTCACTGAGCAGTTGACAGCATTTGAGGTATGGCTTGACCATGGTTCTGAACATAAGAAACCACCAGAACAGTTGCCTATAGTTCTTCAGGTTTTACTTAGTCAATGCCATCGGTTTCGGGCTTTAGTACTCCTTGGAAGGTTCCTTGATATGGGGCCATGGGCAGTAGATCTGGCATTATCTGTTGGAATATTTCCATATGTTCTAAAGCTGTTACAAACAACAACACCCGAACTACGCCAGATCCTTGTATTCATATGGACAAAGATTCTTGCACTTGACAAGTCATGTCAGGTTGATCTAGTGAAGGATGGCGGTCATATCTATTTTATTAAGTTTCTTGATAGCATGGAAGCATATCCAGAGCAACGTGCAATGGCTGCTTTTGTTTTGGCTGTGATTGTGGATGGTCATAGACGAGGCCAAGAAGCTTGTATTGAAGCTGGTTTAATTCATGTCTGCTTAAAGCACCTTCAGAGTTCATGTCCTAATGATTCACAAACTGAACCCCTTTTCCTTCAGTGGCTTTGCCTGTGTCTGGGGAAATTGTGGGAAGACTTTTCAGAGGCACAAACAATCGGTTTGCAGGAAGATGCCACTACTATATTTGCTCCTCTACTGTCTGAACCCCAGCCAGAGGTTAGGGCATCTGCTGTTTTTGCACTAGGCACCCTTCTTGATGTGGGGTTTGATTCATGTAGAAGTGTTGGTGGAGATGAAGAATGTGATGATGATGATAAGTTTAGGGCTGAAGTTAGTATAGTTAAGAGTATGTTAGATGTTGCTTCAGATGGGAGTCCATTGGTGAGGGCAGAGGTAGCAGTGGCTCTAGCACGATTTGCTTTTGGCCACAACAAGCACCTGAAATCTATTGCTGCTGCATATTGGAAGCCTCAAGCTAATTCTTTGATTAATTCCTTACCTTCGTTGACTAATATAAAAGGTTCGGTTGGTGGATATGCTAAACAGAACCAACACATGCCTCATGGAAGTATTGTTTCTCCTCAAATTGGTCCTATCAGGGTTGGAAATGACAACTCTCCAGTGGTTCGAGATGGCCGCGTCTCTTCTAGCAGTCCTCTCGCTGGTTCAGGAATCATGCATGGGTCCCCATTGTCTGATGATTCATCTCATCATTCTGATTCAGGAATTCTGAATGATGGTTTCAGCAATGGAGTGGCTAACCACACTGGACCAAAGCCCTTTGACAATGCATTGTATTCACAATGTGTACTTGCTATGTGTACTTTGGCAAAGGATCCATCTCCACGCATTGCAAATCTTGGTCGCCGGGTACTGTCCATAATAGGTATTGAACAAGTGGTTGCAAAACCATTGAAGTCTAGTGGTGTTCGGACTGCTGAATCTACAGCTTCTCCACTGGCTCGTTCATCTTCTTGGTTTGACATGAATGGAGGACACTTGCCTCTGACCTTCAGAACTCCTCCAGTCAGTCCTCCTCGCCCAAGTTATATAACTCGAATGCGTCGAGTTTGTTCATTGGAGTTTAGGCCCCACCTGATGGATTCTCCAGACTCAGGATTAGCTGATCCACTCTTAGGTTCTGGTGGAGCTTCTGGGACTTCAGATCGAAGCTTTCTTCCACAATCAACTATATATAGTTGGAGTTGTGGGCACTTTTCCAAACCACTTTTAACTGCTGCAGATGATAGCGAAGAGGTATCAGCCAGAAGAGAAGAGAGGGAAAAATTTGCATTGGAGCACATAGCAAAATGCCAGCACTCTGCTGTTAGCAGGCTAACAAATCCAATTGCTAAATGGGACATAAAGGGTACACAAACAGCATTGCTGCAACCTTTCTCTCCTATAGTGATAGCTGCTGATGAGAATGAACGTATCAGGATATGGAACCATGAGGAGGCAACACTACTGAACAGTTTTGATAATCATGATTTTCCTGACAAAGGAATTTCTAAGCTCTGCCTTGTAAATGAGCTTGATGAGAGCTTGCTTCTTGCTGCTTCATCTGATGGAAACATTCGGATTTGGAAAGATTATACTCTGAGGGGTAAACAAAAACTTGTCACTGCATTCTCTTCAATTCATGGTCATAAACCTGGTGTGAGGAATCTGAATGCAGTTGTTGATTGGCAACAACAATGTGGTTATCTGTATGCATCGGGTGAGATATCATCTATTATGCTATGGGATGTTGATAAAGAGCAGCTTGTCAATTCTAAATCTTCATCATCAGATTGCAGTGTCTCAGCATTGGCTGCATCTCAAGTTCATGGGGGACAATTTACAGCTGGTTTCATAGATGGTTCTGTCCGACTTTATGATGTCAGAACACCTGATATGCTCGTTTGTGGATTAAGGCCTCATACACAAAGAGTAGAAAAGGTTGTGGGGATTGGCTTTCAGCCTGGATTAGACCAAGGAAAGATTGTTAGCGCTTCTCAGGCTGGGGATATCCAATTTCTTGATATAAGAAATCATAGCAGTGCCTATCTTACTATTGAAGCTCATAGGGGTTCACTCACAGCTTTAGCAGTACATAGACATGCCCCAATTATTGCCAGTGGTTCAGCGAAACAACTCATTAAGGTCTTTAGCCTGGAGGGTGATCAACTAGGCACCATTCGATACTATCCTACCCTAATGGCCCAGAAAATTGGTTCTGTAAGCTGCCTCAATTTCCATCCATACCAAGTATTACTTGCTGCTGGTGCTGCAGATGCATGTGTTTGTATTTATGCTGATGACAACACTCAAGCTAGATGA
Predicted protein sequences of Glyma09g41510
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma09g41510.1 sequence type=predicted peptide gene model=Glyma09g41510 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MALGDLMASRFSQSTVLVVPTSHNHLDDSTTASSSSSAAAAVAALNNNSSSNDDADFAHRRDSEAAIAIISSGNYAGNAATSMAYLPHTVVLCELRHDAFEAAVPAGPSDSGLVSKWRPKDRMKTGCVALVLCLNISVDPPDVIKISPCARMECWIDPFSMAPQKALESIGKTLSSQYERWQPKARYKCQLDPTVDEVKKLCTTCRKYAKSERVLFHYNGHGVPKPTANGEIWVFNKSYTQYIPLPINELDSWLKTPSIYVFDCSAAGMIVNSFIELHEWSASNSSVSQRDCILLAACEAHETLPQSAEFPADVFTSCLTTPIKMALRWFCTRSLLRESLDYSLIDKIPGRPNDRKTLLGELNWIFTAVTDTIAWNVLPHDLFQRLFRQDLLVASLFRNFLLAERIMRSANCSPVSHPMLPPTHQHHMWDAWDMAAELCLSQLPSLVEDPNAEFQPSTFFTEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLLSQCHRFRALVLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTTTPELRQILVFIWTKILALDKSCQVDLVKDGGHIYFIKFLDSMEAYPEQRAMAAFVLAVIVDGHRRGQEACIEAGLIHVCLKHLQSSCPNDSQTEPLFLQWLCLCLGKLWEDFSEAQTIGLQEDATTIFAPLLSEPQPEVRASAVFALGTLLDVGFDSCRSVGGDEECDDDDKFRAEVSIVKSMLDVASDGSPLVRAEVAVALARFAFGHNKHLKSIAAAYWKPQANSLINSLPSLTNIKGSVGGYAKQNQHMPHGSIVSPQIGPIRVGNDNSPVVRDGRVSSSSPLAGSGIMHGSPLSDDSSHHSDSGILNDGFSNGVANHTGPKPFDNALYSQCVLAMCTLAKDPSPRIANLGRRVLSIIGIEQVVAKPLKSSGVRTAESTASPLARSSSWFDMNGGHLPLTFRTPPVSPPRPSYITRMRRVCSLEFRPHLMDSPDSGLADPLLGSGGASGTSDRSFLPQSTIYSWSCGHFSKPLLTAADDSEEVSARREEREKFALEHIAKCQHSAVSRLTNPIAKWDIKGTQTALLQPFSPIVIAADENERIRIWNHEEATLLNSFDNHDFPDKGISKLCLVNELDESLLLAASSDGNIRIWKDYTLRGKQKLVTAFSSIHGHKPGVRNLNAVVDWQQQCGYLYASGEISSIMLWDVDKEQLVNSKSSSSDCSVSALAASQVHGGQFTAGFIDGSVRLYDVRTPDMLVCGLRPHTQRVEKVVGIGFQPGLDQGKIVSASQAGDIQFLDIRNHSSAYLTIEAHRGSLTALAVHRHAPIIASGSAKQLIKVFSLEGDQLGTIRYYPTLMAQKIGSVSCLNFHPYQVLLAAGAADACVCIYADDNTQAR*