Report for Sequence Feature Glyma09g41270
Feature Type: gene_model
Chromosome: Gm09
Start: 45962579
stop: 45967660
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma09g41270
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G51630 AT
Annotation by Michelle Graham. TAIR10: with no lysine (K) kinase 5 | chr3:19149487-19151924 FORWARD LENGTH=549
SoyBase E_val: 0 ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0048573 GO-bp
Annotation by Michelle Graham. GO Biological Process: photoperiodism, flowering
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0004674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity
SoyBase N/A ISS
GO:0005515 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein binding
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
GO:0043424 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein histidine kinase binding
SoyBase N/A ISS
KOG0584
KOG
Serine/threonine protein kinase
JGI ISS
PTHR13902 Panther
SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-RELATED
JGI ISS
PTHR13902:SF35 Panther
WNK5 (ARABIDOPSIS WNK KINASE 5)
JGI ISS
PF00069 PFAM
Protein kinase domain
JGI ISS
UniRef100_C0M0Q1 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=C0M0Q1_SOYBN
SoyBase E_val: 0 ISS
UniRef100_G7KX47 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: With no lysine kinase n=1 Tax=Medicago truncatula RepID=G7KX47_MEDTR
SoyBase E_val: 0 ISS
Expression Patterns of Glyma09g41270
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma09g41270
Paralog Evidence Comments
Glyma18g44761 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma09g41270 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.09g276300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma09g41270
Coding sequences of Glyma09g41270
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma09g41270.1 sequence type=CDS gene model=Glyma09g41270 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAATTGCCTGATACAATCAGTACAGCCATGTATAAGGGGAGATTCTGCACGAGTAGTGGAGTTAAGTCTCAGCTTGGTTATGTTGAAACCGATCCATCTGGTCGATATGGCCGCTTCAGGGATGTTCTCGGCAAAGGAGCAATGAAGACTGTGTATAGGGCATTTGATGAGTTACTAGGGATTGAAGTGGCTTGGAACCAAGTCAAGCTTGGTGATGCCTTTCACTCACCAGAGCAACTCCAGCGCCTTTATTCAGAGGTTCATCTCCTTAAGCACCTCAACCATGACTCTATGATGATCTTCTATGGTTCTTGGATCGATGTCAGCAACAGAACCTTCAACTTCGTCACTGAATTGTTCACCTCCGGCACCCTTAGAGAGTATAGGCAGAAGTATAAGAGAGTTGATATCCGAGCAGTTAAGAATTGGGCTCGCCAGATTCTAAGTGGTTTGGAGTATTTACACAGCCATAATCCTCCTGTGATACATAGAGATCTCAAGTGTGACAACATCTTTGTCAATGGCCATCAGGGGAGGGTCAAGATTGGTGACTTAGGCCTGGCAGCTATACTTAAAAGCTCCCAACATGCACACAGTGTCATCGGCACACCAGAATTCATGGCACCAGAACTGTATGAAGAGAAATACAACGAGCTGATAGATATATACTCCTTCGGTATGTGCATGATAGAGATGCTTACTTTTGAGTTCCCATATAGTGAGTGCGCCAACCCAGCTCAAATATACAAGAAAGTCACTTCGGGGAAGCTACCTGAAGCATTTTACAAAATCGAAAATTTGGAAGCCCAGGAGTTTGTGGGAAAATGTTTGACAAATGTCTCAGAGAGACCATCAGCGAAGGAGCTCTTGTTGGACCCTTTTTTAGCCATGGAACAACTTGAAATTCCATTGCCACCAAGCATACCAGCATTATTTACAAATAAGTCTTTCAAGCTTAATTGCCCTGCACCAATTCCCAGTGACCATCGTGATCAAACAAAGAACGCGGATATGACAATCAGCGGGTCAATAAACGAAGAGAACAACACTGTTTTCCTTAAAGTCCGGATATCTGACATAACGGGGCATACAAGACATGTGTTCTTCCCATTTGACACATTAAAGGACACGGCTATTCAGGTGGCAATGGAGATGGTGCAAGAACTTGAGATTAGCCACTTGGAGCCATTGGAGATTGCTGTAAGGATAGATCATGAGGTATCAGCTCTAGTTCCAACTTGGAGGGACAGGGTTAAGTGTCACCACCAACGACAGTACAGCTTTAACTACGAAGAAGATGAAGATGTCAATAACCATCACCCTTTCTTCTTATCATCTTCTCCATCATCCCCTCGCGGTTCTGGCCACATGTCTGCTTCCAACTCCTTCAAGACTCGTGTTCGTGGAAACCATTACCCTTTTACTCAAGAATGGCCTCAAGATGATCCGTTCATGGTCAACGACGACGCAAGCCCACAAGCCTCACTGAACTCCTTCAAGTGTTCGAGTTTCCAGTTCTTGGACCCGGGCCAGGAAGACGAGCACGCCCCAACAGATGCAACCGAACGCACCAAGAAGTGCACACCATTATCGTACCGTACCGAAGAACCAGAACCCAATTACACGAAACCGTTTAATTACTGCCCTCCTCGTATGGACTCTTGTTCGTGTGGTTGCAGCAGGTTCGGGTCGAGCCACGCGTACCCGAGGCTCACAAGGATCCGGTCCTGCCCGCACGAGCGGAGGAGCCAGCAGCAGCTGCTGCAACGGTCGATGATGTTGGAGGAGATGTACAAGTACAAGAGACGCTTCTTCAACAACGTTGGCGCCGTTGAGAACCTCGTGTCTAGATGA
Predicted protein sequences of Glyma09g41270
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma09g41270.1 sequence type=predicted peptide gene model=Glyma09g41270 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MELPDTISTAMYKGRFCTSSGVKSQLGYVETDPSGRYGRFRDVLGKGAMKTVYRAFDELLGIEVAWNQVKLGDAFHSPEQLQRLYSEVHLLKHLNHDSMMIFYGSWIDVSNRTFNFVTELFTSGTLREYRQKYKRVDIRAVKNWARQILSGLEYLHSHNPPVIHRDLKCDNIFVNGHQGRVKIGDLGLAAILKSSQHAHSVIGTPEFMAPELYEEKYNELIDIYSFGMCMIEMLTFEFPYSECANPAQIYKKVTSGKLPEAFYKIENLEAQEFVGKCLTNVSERPSAKELLLDPFLAMEQLEIPLPPSIPALFTNKSFKLNCPAPIPSDHRDQTKNADMTISGSINEENNTVFLKVRISDITGHTRHVFFPFDTLKDTAIQVAMEMVQELEISHLEPLEIAVRIDHEVSALVPTWRDRVKCHHQRQYSFNYEEDEDVNNHHPFFLSSSPSSPRGSGHMSASNSFKTRVRGNHYPFTQEWPQDDPFMVNDDASPQASLNSFKCSSFQFLDPGQEDEHAPTDATERTKKCTPLSYRTEEPEPNYTKPFNYCPPRMDSCSCGCSRFGSSHAYPRLTRIRSCPHERRSQQQLLQRSMMLEEMYKYKRRFFNNVGAVENLVSR*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
