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Report for Sequence Feature Glyma09g40751

Feature Type:gene_model
Chromosome:Gm09
Start:45580625
stop:45586416
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma09g40751
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G24910AT Annotation by Michelle Graham. TAIR10: cytochrome P450, family 714, subfamily A, polypeptide 1 | chr5:8567674-8570260 REVERSE LENGTH=532 SoyBaseE_val: 2.00E-112ISS
GO:0016132GO-bp Annotation by Michelle Graham. GO Biological Process: brassinosteroid biosynthetic process SoyBaseN/AISS
GO:0055114GO-bp Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process SoyBaseN/AISS
GO:0005506GO-mf Annotation by Michelle Graham. GO Molecular Function: iron ion binding SoyBaseN/AISS
GO:0009055GO-mf Annotation by Michelle Graham. GO Molecular Function: electron carrier activity SoyBaseN/AISS
GO:0016705GO-mf Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen SoyBaseN/AISS
GO:0019825GO-mf Annotation by Michelle Graham. GO Molecular Function: oxygen binding SoyBaseN/AISS
GO:0020037GO-mf Annotation by Michelle Graham. GO Molecular Function: heme binding SoyBaseN/AISS
KOG0157 KOG Cytochrome P450 CYP4/CYP19/CYP26 subfamilies JGI ISS
PTHR24282Panther FAMILY NOT NAMED JGI ISS
PTHR24282:SF174Panther JGI ISS
PF00067PFAM Cytochrome P450 JGI ISS
UniRef100_G7LEN6UniRef Annotation by Michelle Graham. Most informative UniRef hit: Cytochrome P450 n=1 Tax=Medicago truncatula RepID=G7LEN6_MEDTR SoyBaseE_val: 0ISS
UniRef100_UPI0002338B94UniRef Annotation by Michelle Graham. Best UniRef hit: UPI0002338B94 related cluster n=1 Tax=unknown RepID=UPI0002338B94 SoyBaseE_val: 0ISS

Expression Patterns of Glyma09g40751
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma09g40751 not represented in the dataset
Glyma09g40751 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma09g40751
ParalogEvidenceComments
Glyma18g45070 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma09g40751 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.09g271000 Wm82.a2.v1IGC As supplied by JGI

References for Glyma09g40751
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma09g40751
>Glyma09g40751.1   sequence type=CDS   gene model=Glyma09g40751   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAAGCTGAAGGTCAATGGCAGATTTCAGAGAGGGAGATATGTTGGTCAGTGGCGTTCATAGCTGCATGGAGCATCATAATATTATTATATTTGAAGCTGTGGCATAGGCCTCAAAGGTTAAAATCAATGCTTCAGAAACAAGGCATCAATGGACCAAAACCTTCTTTCCCCTTTGGCAACGATTCTGAGATGCAACAGATCAACCAACCTCCTTCTCTTTCTCTTGAAGCCTTAGACGAATGGGCTTATTCCCTCTACCCATATTTCCATACATGGAAACAACGCTATGTGTTCATGTACTCCACTGGAACCAAACAACATCTGTATGTGGAAATACCCGAATTAATAAAATCGATAGGTGACGGAATTCTTATGTCTAATGGACCGAACTGGACCTTCCAAAGGAATTTACTTGCTCCGGAGTTTTTCCAGAGCAAAATTATGGTTATGGACGAATCAACCATGGCACTAATAAAAAAATGGGAGAGCCATATAACAGAAAGTGAAGGGGGGATTGCAGAGTTGGTAATTGATGGAGATCTGAAGGCTCTGACAGCATATGTTATAGGAGTATATCCTTTTGCCAAACATGTAAACAAGAAATCAATACTAGATTATACCATGTTTCTTCCCACCAAGGAAAACAAAGAGCTATGGAAATTGCAGAAAGAGGTGGAAATGATGATACTAAAAGTGATCAAAGACCGTGAAGCAGATAACCAAAAGAGTGGCACACATGAGAATCAAAAGGATCTATTACAAATAATACTAGAAGGTGCTGCCAGTGCCACCACCGATACTAGTCGAAAGGGTATTTTTAGGCCTCGGTATAACATAAACCAGCTGATTCTAGACATCTGCAAAAATGTTTACTTTGCAGGCTCTGAGAGCACTGCTCTTGCAACTATTTGGACATTGCTGCTACTTGCCTTACACCCTGAGTGGCAACAACGAGTTAGATCTGAGATTATGGAGACTTACGAAAACATGGTTCCTCATTCCTTTCATGACAAGGACAAACTTCGAAACTTGAAAGCACTAACAATGGTGATTCAAGAGAGTCTACGACTTTATGGACCTTCAACTATGGCCACTAGGGAAGTGTTGGCCAATGAGGTGAAGTTGGGGGAACATGTTCTGCCTAAAGGCATCAACATGTGGTTGTTCACACTTGCATTGCACCGTGACCCTGATAATTGGGGGCCAGATGCTAGGGAATTCAAGCCAGAAAGGTTTGCTGGTGGTGTTTCTGCAGCATGCAAGTACCCCCAAGTTTATATTCCATTTGGCCTCGGGAGTCGAATTTGCTTAGGCCAAAACTTTGCCATGCTACAAATGAAGGAAGTGCTGTGTCTTCTTCTCTCCAACTTCTCCTTTGCTGTTTCACCAAACTATTGCCATTGCCCTGTGGATGGTTTGCTGTTGATGCCAAAATATGGTGTAAGGCTTCTTGCTAGCAAGACTAGCTAG
Predicted protein sequences of Glyma09g40751
>Glyma09g40751.1   sequence type=predicted peptide   gene model=Glyma09g40751   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEAEGQWQISEREICWSVAFIAAWSIIILLYLKLWHRPQRLKSMLQKQGINGPKPSFPFGNDSEMQQINQPPSLSLEALDEWAYSLYPYFHTWKQRYVFMYSTGTKQHLYVEIPELIKSIGDGILMSNGPNWTFQRNLLAPEFFQSKIMVMDESTMALIKKWESHITESEGGIAELVIDGDLKALTAYVIGVYPFAKHVNKKSILDYTMFLPTKENKELWKLQKEVEMMILKVIKDREADNQKSGTHENQKDLLQIILEGAASATTDTSRKGIFRPRYNINQLILDICKNVYFAGSESTALATIWTLLLLALHPEWQQRVRSEIMETYENMVPHSFHDKDKLRNLKALTMVIQESLRLYGPSTMATREVLANEVKLGEHVLPKGINMWLFTLALHRDPDNWGPDAREFKPERFAGGVSAACKYPQVYIPFGLGSRICLGQNFAMLQMKEVLCLLLSNFSFAVSPNYCHCPVDGLLLMPKYGVRLLASKTS*






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