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Report for Sequence Feature Glyma09g38941

Feature Type:gene_model
Chromosome:Gm09
Start:44152557
stop:44153180
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma09g38941
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G36470AT Annotation by Michelle Graham. TAIR10: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:17215128-17216475 REVERSE LENGTH=371 SoyBaseE_val: 7.00E-40ISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0008168GO-mf Annotation by Michelle Graham. GO Molecular Function: methyltransferase activity SoyBaseN/AISS
GO:0008757GO-mf Annotation by Michelle Graham. GO Molecular Function: S-adenosylmethionine-dependent methyltransferase activity SoyBaseN/AISS
PF03492PFAM SAM dependent carboxyl methyltransferase JGI ISS
UniRef100_G7J763UniRef Annotation by Michelle Graham. Most informative UniRef hit: Salicylic acid/benzoic acid carboxyl methyltransferase n=1 Tax=Medicago truncatula RepID=G7J763_MEDTR SoyBaseE_val: 7.00E-64ISS
UniRef100_I1L6E4UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1L6E4_SOYBN SoyBaseE_val: 4.00E-114ISS

Expression Patterns of Glyma09g38941
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma09g38941 not represented in the dataset
Glyma09g38941 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma09g38941 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma09g38941
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma09g38941
>Glyma09g38941.1   sequence type=CDS   gene model=Glyma09g38941   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAATGGTGGCAAGGGAGAAAGGAGTTATACAAACAACTGCTTGCTACAAAAAAAACTAATGCTTAAAGCCAAACCCATACTTGAAGAAACTATAATGAGACTATATCGTGATTTTTCTCCAAACTGCATGAAAGTGGCAAACTTAGGTTGCTCTGTAGGACCAAATGCACTTCTGGTGATATCAAATATTATTGACATTGTCAATACCGCTTGCACTAGCTTGAATCGTGAACCACCAAAATTCCAATTTTATCTCAATGATTTATTTGGAAACGGATTCAATACCATCTTCAAGTCACTTCCAAATTTCTATACAATATTGGTAGAAGATAAGGGACACAAGTTTGGTCCATGCTTTGTTAATGCAACCCCTGGATCCTTCTATGGGAGGCTCTTTCCCAGTAATTCCATAAACCTATTTCATTCCTCCAACAGTCTACACTGGCTTTCCCAGGTCAAATCTCTTTTTTGTTTTCCTCTAAGCTGA
Predicted protein sequences of Glyma09g38941
>Glyma09g38941.1   sequence type=predicted peptide   gene model=Glyma09g38941   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MNGGKGERSYTNNCLLQKKLMLKAKPILEETIMRLYRDFSPNCMKVANLGCSVGPNALLVISNIIDIVNTACTSLNREPPKFQFYLNDLFGNGFNTIFKSLPNFYTILVEDKGHKFGPCFVNATPGSFYGRLFPSNSINLFHSSNSLHWLSQVKSLFCFPLS*






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