Report for Sequence Feature Glyma09g38860
Feature Type: gene_model
Chromosome: Gm09
Start: 44110975
stop: 44112992
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma09g38860
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G67090 AT
Annotation by Michelle Graham. TAIR10: Subtilisin-like serine endopeptidase family protein | chr5:26774111-26776321 REVERSE LENGTH=736
SoyBase E_val: 3.00E-123 ISS
GO:0006508 GO-bp
Annotation by Michelle Graham. GO Biological Process: proteolysis
SoyBase N/A ISS
GO:0008152 GO-bp
Annotation by Michelle Graham. GO Biological Process: metabolic process
SoyBase N/A ISS
GO:0043086 GO-bp
Annotation by Michelle Graham. GO Biological Process: negative regulation of catalytic activity
SoyBase N/A ISS
GO:0005576 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extracellular region
SoyBase N/A ISS
GO:0005618 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cell wall
SoyBase N/A ISS
GO:0004252 GO-mf
Annotation by Michelle Graham. GO Molecular Function: serine-type endopeptidase activity
SoyBase N/A ISS
GO:0042802 GO-mf
Annotation by Michelle Graham. GO Molecular Function: identical protein binding
SoyBase N/A ISS
PTHR10795 Panther
SUBTILISIN/KEXIN-RELATED SERINE PROTEASE
JGI ISS
PTHR10795:SF17 Panther
gb def: possible protease [sinorhizobium meliloti]
JGI ISS
PF00082 PFAM
Subtilase family
JGI ISS
UniRef100_I1L6D7 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1L6D7_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q2HV71 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Protease-associated PA; Proteinase inhibitor I9, subtilisin propeptide n=1 Tax=Medicago truncatula RepID=Q2HV71_MEDTR
SoyBase E_val: 0 ISS
Expression Patterns of Glyma09g38860
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma09g38860
Paralog Evidence Comments
Glyma18g47450 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma09g38860 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.09g253300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma09g38860
Coding sequences of Glyma09g38860
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma09g38860.1 sequence type=CDS gene model=Glyma09g38860 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
GAGTTAAAGGCTATTAAGAACACTCATGGTTTAGTTGCAGCATATCCAGACAGAAATGTTACCTTAGACACTACTCACACTTCTGAATTTGTCTCCCTTGACTCTTCCAGTGGCCTATGGCATGCCTCAAATTTCGGGGAGAATGTGATTGTGGGTGTTATTGACACTGAAAATTCCAAACAAATGGAAAGGGACCTAGCCTGTGAGAAAGTACAAGACTTCAACACTTCCATGTGCAACTTAAAACTGATTGGAGCTAGATATTTCAACAAGGGTGTCATTGCAGCAAATTCCAAGGTTAAAATCAGCATGAACTCAGCTAGAGACACCTCACGTCATGGAACTCACACGTCTTCAACAGTTGCAGGCAACTATGTTAGTGGAGCCTCTTTGGCTATGCTAAAGGTCATTTTTTACGAGGATGTTTTGGCTGGAATGGACCAAGCCATTGCTGATGGAGTTGATGTGATTTCCATCTCTATGGTGTTTGATGGTGTTCCACTTTACGAGGACCCTAAAGCAATAGCTTCTTTTGCAGAAATGAAAAAAGGGGTGGTGGTTTCATCTTCTGCAGGTAATGAAGGTCCTGATCTTGGTACCTTGCACAATGGAATCCCCCGGCTTCTGACCGCGGCTGCCAGTACCATAGACCGCACATTTGGTACTCTAATTCTTGGAAATGGCCAAACCATTATTGGTTGGACCTTGTTTCCAGCAAATGCCTTAGTGGAAAATCTTCCACTTATCTACAATAGGATTATACCAGCATGTAATTCAGTAAAGCTGTTATCCAAAGTGGCCACAAAAGGGATCATTGTATGTGATTCAGAGCCAGACCCTAACTTGATGTTTAAGCAAATGAGGTTGGTTAATAAAACCAGTTTGTTAGGGGCAGTTTTTACCTATAATTCTCCTTTATTAAATGAAATAGGAAGTGTGAGCTCTCCAACTATTGTAATCAGTGCAAAGGATACACCACCTGTGATCAAGTATGCAAAAAGCCATAATAAGAAGCTAACAGCCACCATCAAATTTCAACAAACATTTGTTGGAATAAAGCCGACACCAGCTGTTAACTTTAACTCATCAAGAGGTCCTTCACCAAGTTATCATGTGGTCTTGAAGCCTGGCATAATGGCACCTGGCTCTAATGTTCTTGCTGCTTATGTTCCTACAGAACCGACAGCTACAATTGACACCAATGTGATGTTTTCCAGTGGCTACAAGTTGCTGTCTGGAACATCCATGGCTTGTCCTCATGCTTCTGGTGTTGCTGCTCTTTTGAAAGCTGCACACCCTCAATGGAGTGCTGCTGCTATAAGGTCTGCACTAGTAACCACAGCTAGTCCTCTTGATAATACACAAAATCCAATTAGGGACTATGGTTACCCTTCTCAATATGCTTCCCCTCTTGCCATTGGAGCCGGTCAAATGGACCCCAACACAGCACTTGATCCAGGTTTGATATATGATGCCACCCCACAGGACTATGTTAATCTCCTTTGTGCTTTGAATACACACAAAAAGCAAATCCTAACCATTACTAGATCAACATCTTACAATTGTGCAAAACAATCGTTTGATCTTAATTACCCTTCATTTATAGCTTTCTACAGCAACAAAACAAGGCCAATTGTTCACAAGTTTAGGAGGACAGTGACCAATGTTGGAAGTGGTACTGCCACATATAGAGCCAAGGTGACACAACCTAAGGGCTCTGTGGTGATAGTGTCACCTGAGAGATTAGCATTCAGATATAAAAATGAGAAGCTGAGTTACGATGTTGTGATAAAGTATAGCAAGTACAACAAGGAAAATATTTCATTTGAGGATCTAGTTTGGATTGAAGATGGTGGAGAACACAGTGTTAGAAGTTCCATTTTAGTGGCACCAAGTGGAATTGTATGA
Predicted protein sequences of Glyma09g38860
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma09g38860.1 sequence type=predicted peptide gene model=Glyma09g38860 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ELKAIKNTHGLVAAYPDRNVTLDTTHTSEFVSLDSSSGLWHASNFGENVIVGVIDTENSKQMERDLACEKVQDFNTSMCNLKLIGARYFNKGVIAANSKVKISMNSARDTSRHGTHTSSTVAGNYVSGASLAMLKVIFYEDVLAGMDQAIADGVDVISISMVFDGVPLYEDPKAIASFAEMKKGVVVSSSAGNEGPDLGTLHNGIPRLLTAAASTIDRTFGTLILGNGQTIIGWTLFPANALVENLPLIYNRIIPACNSVKLLSKVATKGIIVCDSEPDPNLMFKQMRLVNKTSLLGAVFTYNSPLLNEIGSVSSPTIVISAKDTPPVIKYAKSHNKKLTATIKFQQTFVGIKPTPAVNFNSSRGPSPSYHVVLKPGIMAPGSNVLAAYVPTEPTATIDTNVMFSSGYKLLSGTSMACPHASGVAALLKAAHPQWSAAAIRSALVTTASPLDNTQNPIRDYGYPSQYASPLAIGAGQMDPNTALDPGLIYDATPQDYVNLLCALNTHKKQILTITRSTSYNCAKQSFDLNYPSFIAFYSNKTRPIVHKFRRTVTNVGSGTATYRAKVTQPKGSVVIVSPERLAFRYKNEKLSYDVVIKYSKYNKENISFEDLVWIEDGGEHSVRSSILVAPSGIV*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
