Glyma09g38331 - SoyBase

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Report for Sequence Feature Glyma09g38331

Feature Type:	gene_model
Chromosome:	Gm09
Start:	43719334
stop:	43720756
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma09g38331

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G20560	AT	Annotation by Michelle Graham. TAIR10: DNAJ heat shock family protein \| chr2:8848353-8849815 REVERSE LENGTH=337	SoyBase	E_val: 2.00E-40	ISS
GO:0006457	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein folding	SoyBase	N/A	ISS
GO:0009408	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to heat	SoyBase	N/A	ISS
GO:0009644	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to high light intensity	SoyBase	N/A	ISS
GO:0034976	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to endoplasmic reticulum stress	SoyBase	N/A	ISS
GO:0042542	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to hydrogen peroxide	SoyBase	N/A	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0031072	GO-mf	Annotation by Michelle Graham. GO Molecular Function: heat shock protein binding	SoyBase	N/A	ISS
GO:0051082	GO-mf	Annotation by Michelle Graham. GO Molecular Function: unfolded protein binding	SoyBase	N/A	ISS
PTHR24077	Panther	FAMILY NOT NAMED	JGI		ISS
PTHR24077:SF89	Panther		JGI		ISS
PF01556	PFAM	DnaJ C terminal region	JGI		ISS
UniRef100_B7FHS3	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Chaperone protein dnaJ n=1 Tax=Medicago truncatula RepID=B7FHS3_MEDTR	SoyBase	E_val: 2.00E-41	ISS
UniRef100_I1KEY3	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KEY3_SOYBN	SoyBase	E_val: 8.00E-42	ISS

Expression Patterns of Glyma09g38331

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma09g38331 not represented in the dataset	Glyma09g38331 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma09g38331 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.09g247800	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma09g38331

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma09g38331

Limit To All Plant Sequences

>Glyma09g38331.1   sequence type=CDS   gene model=Glyma09g38331   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGAAGAGGAACTGAGTACAAGTTTTCCTGCACTCTGGAGGAGTTATATACAGGGAAAACCAAGAACATTAAGATCACTAGAGAAATTGCTGATGCCAAAGGTATGCAGGTGGAGGAGACGCTGAGAATTAATGTGAAGCCTGGTTGGAAGAAAGGTATGAAGTTCGTCTTCCAAGAGAAAGAACCGCACAGTGTCTTCATTCGTGATGGAAATGATCTAATTGTCGTCCAAGAAATTTCTCTTGATGGCCGTTATGTTATTGTATCTCACGTCACTGGATCGTGGATCATTGCATTGTATATCAACGAAGTTATTCGTCCTGATTACGAGCAGGTCTTTCCAACACTTGGAATGCCTTTCTGGGAAGATCCAACAAAGAATGGAATGTTGAGGATAAAGTTTAACATCATATTTCCAATTCATCCCACTGCGGACCAGAAGGCACAAATCAACAAAGTCTTATCCCTCCCATCATAA

Predicted protein sequences of Glyma09g38331

Limit To All Plant Sequences

>Glyma09g38331.1   sequence type=predicted peptide   gene model=Glyma09g38331   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGRGTEYKFSCTLEELYTGKTKNIKITREIADAKGMQVEETLRINVKPGWKKGMKFVFQEKEPHSVFIRDGNDLIVVQEISLDGRYVIVSHVTGSWIIALYINEVIRPDYEQVFPTLGMPFWEDPTKNGMLRIKFNIIFPIHPTADQKAQINKVLSLPS*

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