Report for Sequence Feature Glyma09g37970
Feature Type: gene_model
Chromosome: Gm09
Start: 43487447
stop: 43492857
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma09g37970
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
UniRef100_I1MEI7 UniRef
Annotation by Michelle Graham. Best UniRef hit: DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max RepID=I1MEI7_SOYBN
SoyBase E_val: 3.00E-07 ISS
UniRef100_I1MEI7 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max RepID=I1MEI7_SOYBN
SoyBase E_val: 3.00E-07 ISS
Expression Patterns of Glyma09g37970
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma09g37970
Paralog Evidence Comments
Glyma18g48415 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma09g37970 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.09g244500 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma09g37970
Coding sequences of Glyma09g37970
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma09g37970.1 sequence type=CDS gene model=Glyma09g37970 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTCGTCGAGGAACCAAAACATGAACAAGAGGAAGAACCGCAAAATGCTGAAAGCGAAGAAGAAGAGGAAGAGGAGGATCTCACTCTCGAAGAAGAGCCCGTGGAGAAGCTTCTGGAAATGTTCACGAAGGAGCAGCTCCACTCTCTCGCCGTAGAATTGGCGATCCTCTTGTCTCATCATGGATTCGTTGAGTCTTTCTTCTGTTTCAGAACAGGCCAGGGAGAACAATGTAAATTAACTAACAAGTTCTTGCTTCCAATAAAGCCTCCTGACAAAATATTGTCTTACAATAAAGCCTATATTGACGAGGAAGATGAAGAAGAGTGGAGCTCACAAAGCGACGAGGAAAAGGGCAAACAAGGAATATGCTATATCTTCTTCCTCTTCCCATGTGATAGATATCAAGACACTTTCAAAACTTTAGAACGTGGAAGCCAAGGATTAAGAAAAAATGATTCTCACATAGAACATCGTGCTGCATTAGCAGTTAAGTTATACGGAGTTCAAGCAGCACTTTTATCTGCTTTGGGCAACCCTTTTGAGAACCTATCCCAGTCCAAAAGCTCAATCCCTTATCGTGTCTGGTGTCCGACACTCATCCGTGTCAGTGTCCGACACCGACACAACACCCATACCACGTTCTATATTTTGGACATTACAGGTGTCTACATGTTAGCGTCCGTGTCGTGTCCAGTGTTTGTGTCGGTGTCGGTGCTTCATAGCACAGGGTTTGATGTCACGTGTGGCATGTTTAGAATGAGTGGCATCTTGTTTGCATCTTTAGGAGTTCTTGGTTTTGTTCTGCTCCTTCTTGTTGTGGTCATGATGGTGCTTTTTGCTTCCTGGAGTTGCGCTAAACAAGATGGAGGAGCCAAGTGA
Predicted protein sequences of Glyma09g37970
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma09g37970.1 sequence type=predicted peptide gene model=Glyma09g37970 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVVEEPKHEQEEEPQNAESEEEEEEEDLTLEEEPVEKLLEMFTKEQLHSLAVELAILLSHHGFVESFFCFRTGQGEQCKLTNKFLLPIKPPDKILSYNKAYIDEEDEEEWSSQSDEEKGKQGICYIFFLFPCDRYQDTFKTLERGSQGLRKNDSHIEHRAALAVKLYGVQAALLSALGNPFENLSQSKSSIPYRVWCPTLIRVSVRHRHNTHTTFYILDITGVYMLASVSCPVFVSVSVLHSTGFDVTCGMFRMSGILFASLGVLGFVLLLLVVVMMVLFASWSCAKQDGGAK*