Report for Sequence Feature Glyma09g37794
Feature Type: gene_model
Chromosome: Gm09
Start: 43270314
stop: 43279213
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma09g37794
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G02100 AT
Annotation by Michelle Graham. TAIR10: Leucine carboxyl methyltransferase | chr1:389876-392448 FORWARD LENGTH=332
SoyBase E_val: 4.00E-151 ISS
GO:0048573 GO-bp
Annotation by Michelle Graham. GO Biological Process: photoperiodism, flowering
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0008168 GO-mf
Annotation by Michelle Graham. GO Molecular Function: methyltransferase activity
SoyBase N/A ISS
KOG2918
KOG
Carboxymethyl transferase
JGI ISS
PTHR13600 Panther
LEUCINE CARBOXYL METHYLTRANSFERASE
JGI ISS
PF04072 PFAM
Leucine carboxyl methyltransferase
JGI ISS
UniRef100_B9RCZ7 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Leucine carboxyl methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RCZ7_RICCO
SoyBase E_val: 2.00E-167 ISS
UniRef100_UPI00023385F0 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI00023385F0 related cluster n=1 Tax=unknown RepID=UPI00023385F0
SoyBase E_val: 0 ISS
Expression Patterns of Glyma09g37794
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma09g37794
Paralog Evidence Comments
Glyma18g48700 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma09g37794 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.09g242700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma09g37794
Coding sequences of Glyma09g37794
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma09g37794.1 sequence type=CDS gene model=Glyma09g37794 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAAGATTCACACTGCAACACTGCAGCGGTGCAAGCCACCAACGATGACGCCTCCGCCAGCAAATTGTCATGTGTGAAAAAGGGATACATGAAAGATGATTACATTCATTTATTTGTTAGACGACCTGTTAGTAGATCTCCAATAATTAATCGAGGTTACTTTGCTCGCTGGGCTGCTATTCGGAAACTTCTCTATCAGTTTCTTGATGGTGAGAAGAAGTCATATGAAGATCCCCCAATAAAGAAGCAGATATTATCACTTGGAGCTGGTTTTGACACAACATATTTTCAGTTGCAGGATGAGGGTAAAGCACCATATTTATATGTGGAAGTGGATTTTAAGGAGGTAACTAGTAAAAAGGCAGCACTGATTGAAACTTGCAGTCCATTGAGGAATAAAGTTGATGTGACAGCAGTCCTATCTAGATTGTTCAGTGCACACTATAAACTACTCCCTTCAGATTTGCGTGATGTGCAACAATTACATGCTATTATAACTCATGCTGGTTTGGATCCAAGTCTGCCAACTTTTATAATTGCAGAATGTGTTCTGATCTACTTGGATCCTGATTCAACTCGTGCAATTGTTGGTTGGGCTTCCCAAACATTTTCAACCGCAATATTTTTTCTTTATGAGCAGATCCACCCAGATGATGCTTTTGGACAACAAATGATACGGAATTTGGAGTGTCGAGGTTGTGATCTGTTGGGTATTTATGCTACACCAACTTTAGTTGCAAAGGAAAAATTGTTTCTGGACCAAGGATGGCAGAAGTCTGTTGCCTGGGACATGATGAGAGTTTATAATGATTTTATTGATGCCCAAGAAAGACAGGAGCACTACTGTGTGGCTTATGCAATCAATGATGCCATGGTATGA
Predicted protein sequences of Glyma09g37794
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma09g37794.1 sequence type=predicted peptide gene model=Glyma09g37794 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEDSHCNTAAVQATNDDASASKLSCVKKGYMKDDYIHLFVRRPVSRSPIINRGYFARWAAIRKLLYQFLDGEKKSYEDPPIKKQILSLGAGFDTTYFQLQDEGKAPYLYVEVDFKEVTSKKAALIETCSPLRNKVDVTAVLSRLFSAHYKLLPSDLRDVQQLHAIITHAGLDPSLPTFIIAECVLIYLDPDSTRAIVGWASQTFSTAIFFLYEQIHPDDAFGQQMIRNLECRGCDLLGIYATPTLVAKEKLFLDQGWQKSVAWDMMRVYNDFIDAQERQEHYCVAYAINDAMV*