Glyma09g37670 - SoyBase

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Report for Sequence Feature Glyma09g37670

Feature Type:	gene_model
Chromosome:	Gm09
Start:	43186166
stop:	43187179
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma09g37670

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G28580	AT	Annotation by Michelle Graham. TAIR10: P-loop containing nucleoside triphosphate hydrolases superfamily protein \| chr3:10715736-10717238 FORWARD LENGTH=500	SoyBase	E_val: 7.00E-112	ISS
GO:0009723	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to ethylene stimulus	SoyBase	N/A	ISS
GO:0009737	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to abscisic acid stimulus	SoyBase	N/A	ISS
GO:0005783	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: endoplasmic reticulum	SoyBase	N/A	ISS
GO:0005886	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane	SoyBase	N/A	ISS
GO:0000166	GO-mf	Annotation by Michelle Graham. GO Molecular Function: nucleotide binding	SoyBase	N/A	ISS
GO:0005524	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ATP binding	SoyBase	N/A	ISS
GO:0016887	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ATPase activity	SoyBase	N/A	ISS
GO:0017111	GO-mf	Annotation by Michelle Graham. GO Molecular Function: nucleoside-triphosphatase activity	SoyBase	N/A	ISS
PTHR23070	Panther	BCS1 AAA-TYPE ATPASE	JGI		ISS
PTHR23070:SF1	Panther	AAA-TYPE ATPASE-RELATED	JGI		ISS
PF00004	PFAM	ATPase family associated with various cellular activities (AAA)	JGI		ISS
UniRef100_G7KK18	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Mitochondrial chaperone BCS1 n=1 Tax=Medicago truncatula RepID=G7KK18_MEDTR	SoyBase	E_val: 6.00E-120	ISS
UniRef100_I1L614	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=2 Tax=Glycine max RepID=I1L614_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma09g37670

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma09g37670 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.09g241700	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma09g37670

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma09g37670

Limit To All Plant Sequences

>Glyma09g37670.1   sequence type=CDS   gene model=Glyma09g37670   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGATGACAACGAAGAGATAACAAAAACTTTCCAAGGCGCCAAGGTCTGGTGGGTTTCAAACAAAACCATCACCAAATCACAGTCGATCTCGTTTTACCCTGCGAGGTTCGAAACCCTAGCCATGGAGAAAGAAATGAAACAACAGATTATATATGATCTTGTCAACTTCAAGAATGGGAAAGAGTATTATGACAAGATTGGAAAAGCTTGGAAGCGTGGTTATTTACTATACGGTCCTCCGGGGACCGGGAAATCTACGATGATAGCTGCTATGGCTAATTTCATGTACTATGATGTGTATGATCTTGAGTTGACGGCTGTGAAGGATAACACGCAGTTGAGAACTTTGTTGATTGAGACAACAAGTAAGTCTATTATTGTGATTGAAGATATTGATTGTTCTCTTGATCTTACTGGGAAGAGGGTGATGAAAAAGGAGAAGGAAAAGAGTGAGGATGCCAAAGATCCTATTAAGAAGACCGAAGAAGAAGAGAATAATAAGGAGAGTAAGGTGACTTTGTCGGGTTTGTTGAATTGCATTGATGGGATTTGGTCGGGTTCTGCTGGAGAGAGGATCATTGTTTTCACGACAAACTATGTGGACAAGCTTGATCCTGCTCTCGTTAGGAGTGGAAGGATGGACAAGAAAATCGAATTGCCTTATTGTTGCTTTGAGGCTTTAAAGGTTTTGGCAAAGATTTATTTGGATGTTGATCACCATGGTTTGTTTCATGCTGTTGAGGGGTTGTTGGAAGAGAGCAATATGACACCTGCTGATGTTGCTGAGGATATGATGCCTAAGTCGAAGAGTGATGATGTGGAGACATGCTTGAAGAAGTTGATTGAATCTCTTGAGAAGGCCATGAAGAAGGATCAAGAAGAAGCACAAAAGAAGCGTGATGAAGAAGAAGCTAGGCTGAAGGAAGAGAAGGAACAGTTTGCACAGGAAGAAGCAAAAAAGAGTGATGAGAAAGCTGGGAAAGACGTGAAGGAGAATGGTTTCGTCCATTGA

Predicted protein sequences of Glyma09g37670

Limit To All Plant Sequences

>Glyma09g37670.1   sequence type=predicted peptide   gene model=Glyma09g37670   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MDDNEEITKTFQGAKVWWVSNKTITKSQSISFYPARFETLAMEKEMKQQIIYDLVNFKNGKEYYDKIGKAWKRGYLLYGPPGTGKSTMIAAMANFMYYDVYDLELTAVKDNTQLRTLLIETTSKSIIVIEDIDCSLDLTGKRVMKKEKEKSEDAKDPIKKTEEEENNKESKVTLSGLLNCIDGIWSGSAGERIIVFTTNYVDKLDPALVRSGRMDKKIELPYCCFEALKVLAKIYLDVDHHGLFHAVEGLLEESNMTPADVAEDMMPKSKSDDVETCLKKLIESLEKAMKKDQEEAQKKRDEEEARLKEEKEQFAQEEAKKSDEKAGKDVKENGFVH*

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