Report for Sequence Feature Glyma09g37000
Feature Type: gene_model
Chromosome: Gm09
Start: 42569283
stop: 42575359
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma09g37000
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G29060 AT
Annotation by Michelle Graham. TAIR10: EXS (ERD1/XPR1/SYG1) family protein | chr3:11044990-11048465 REVERSE LENGTH=800
SoyBase E_val: 0 ISS
GO:0006817 GO-bp
Annotation by Michelle Graham. GO Biological Process: phosphate ion transport
SoyBase N/A ISS
GO:0016036 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellular response to phosphate starvation
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0016021 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane
SoyBase N/A ISS
KOG1162
KOG
Predicted small molecule transporter
JGI ISS
PTHR10783 Panther
XENOTROPIC AND POLYTROPIC MURINE LEUKEMIA VIRUS RECEPTOR
JGI ISS
PTHR10783:SF4 Panther
XENOTROPIC AND POLYTROPIC MURINE LEUKEMIA VIRUS RECEPTOR XPR1
JGI ISS
PF03105 PFAM
SPX domain
JGI ISS
PF03124 PFAM
EXS family
JGI ISS
UniRef100_I1L5U7 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1L5U7_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q2HT55 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: SPX, N-terminal; EXS, C-terminal n=1 Tax=Medicago truncatula RepID=Q2HT55_MEDTR
SoyBase E_val: 0 ISS
Expression Patterns of Glyma09g37000
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma09g37000
Paralog Evidence Comments
Glyma18g49680 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma09g37000 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.09g235200 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma09g37000
Coding sequences of Glyma09g37000
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma09g37000.1 sequence type=CDS gene model=Glyma09g37000 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAAGTTTGGGAAAGAATTTGTCTCACAAATGGTGCCAGAATGGGAAGAAGCATACATGGATTACAACTGTCTCAAAGCTACTCTGAAAAACATTTCAAAGTTTAGAGAGCTAAACGAGTCAGCACCAATGGCATCCACACCAAAAGGGTCTCTGAAGAGAAGATTAACACTCTATAGAGCATTTAGTGGTCTTACTGATAGACAAAGAGGGTCTCCTAGGAAGGACGAGGATGAAGTTATACTTGTTCGTGCTGCGGAGGGTGAAGGCTCAGAAGGGTTGTATCAGACATTGTTCCTCAAGCCTTCAGAAGAAGGGGCAGAACAAGATCTTGTGTTTTTCAAGAAACTTGATCATGAGTTTAACAAGGTGAATAGCTTCTACAAGAAGATGGTGAAGGAAATGATTGAGGAGGCAGCGGAATTGAGTAAGCAAATGAATGCTCTGATTGCTCTTAGAATCAAGGTGGACAAGGTGGGGTTCATAAATCTTGGTAGCTATGGTCACTCACGTGTGCACATGGATGTGATTCATGAAATTGAGATGAGCAATGGACGGCATTTGGAAAATGGAAGTGGAAATTATGAGGAAGAAACCACTTCTAGGACTTCCGTTGAGGGCTTTAGACCGGCTTCATTGGAGATCCTCGATCACGTGAAGATCAACATGACCACACCAGAAACTGCAATGTCAACCATAAAAGGGCTTCTCCCAAGTTCAAAATCCGACCCTTCATTTAGCAAGAAAGAGCTCAGGAAAGCTGAGGAACAAATAAGCATAGCCTTAAAGGAATTCTACAATAAGCTTCGGCTTCTAAAAAGCTATAGCTTCTTAAACTTGTTGGCATTCTCAAAAATCATGAAGAAGTATGACAAGGTCAGTTCAAGGAATACATCAAAGGATTACTTAAAGATGGTGGACAGTTCATATGTTGGCAGCTCAGATGAGGTCAATAGGCTCATGGAAAGGGTCGAGCATGCCTTCATTAAGCACTTTGCAAATGGGAATCATAGAAAAGGAATGAACACATTGAGACCAGCTGTTAAGAAGGAGCGACATAGAATTACATTCTTATTGGGACTGTTTACTGGCTGCTCAATTGCCCTCGTTGTGGCACTCATTATACTAATACATGCAAGAAATATTCTATATAGCGAGGGTCGTACTAGATATATGGACAACATATTTCCTCTTTACAGTCTCTTTGGATACATAGTCTTGCATATGATAATGTACTCTGCAAATGTATACCTATGGAGGCGTTATAAAATCAACTACCCCTTTATATTTGGCTTCAAGGAAGGAACAGAATTGGGATACAGAGAAGTCTTTCTTCTTAGCTCGGGCCTTGCAGTACTCTCATTGGCTGCTGTCCTCTCAAACTTGGATATGGAGATGGACCAGAGAACAAAAAGTTTCTCAGCATTGACAGAATTAGTCCCTTTAGGCCTTGTCATTGTTCTGCTGCTCATAACATTTAGTCCCTTCAACATCATATATAAATCCAGCCGCTTCTTCCTTATTCAGTGTGCGTTTCATAGTGCTTGTGCTCCTCTTTACAAGGTCAATTTCCCAGAAAATTTCTTGGCAGACCAGCTTACCAGCCAGGTGCAGGCCTTTAGAAGTTTGGAATTCTATGTCTGTTACTATTTCTGGGGAAATTTCAAGACCAGATCAAACAAGTGCCTTGAAAGTGATGTCTATAAAGCATTTTACTTAATTGTTGCTATTATTCCATTCTGGATCCGTTGTCTCCAGTGCTTTCGACGTTTGCTTGAAGAAAGAAATACAATGCATGGGCTCAATGGGCTAAAATACATCTCAACAGTAGTAGCACTTGTCTTGAGGACTACTAATGAGTTCCGTAGAGGAATGGTTTGGCAAATTCTAGCTGCAACTTCTTCAAGCATTGCAACGATTGTTAATACATATTGGGATATCGTCATAGATTGGGGTTTGCTGAGAAGGAATTCAAGAAATCCATGGTTGAGAGAAAAACTCTCTGTACCAAACAAAAGTGTATATTTTGTTGCTATGGTGTTGAATGTTATACTGCGACTTGCATGGATGCAATCTGTTTTAGGCATTAGGGAAGCTCCTTTCCTGCATAGAACAGCTTTGACAGCTCTTGTAACTTGCTTGGAGATTCTTCGCCGTGGCATATGGAATTTTTTCAGATTGGAGAATGAGCACTTGAACAATGTTGGCAACTATCGAGCATTCAAATCAGTACCCCTGCCTTTTAATTATGAAGATGACGAAGAGAATACAGTCATATAA
Predicted protein sequences of Glyma09g37000
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma09g37000.1 sequence type=predicted peptide gene model=Glyma09g37000 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MKFGKEFVSQMVPEWEEAYMDYNCLKATLKNISKFRELNESAPMASTPKGSLKRRLTLYRAFSGLTDRQRGSPRKDEDEVILVRAAEGEGSEGLYQTLFLKPSEEGAEQDLVFFKKLDHEFNKVNSFYKKMVKEMIEEAAELSKQMNALIALRIKVDKVGFINLGSYGHSRVHMDVIHEIEMSNGRHLENGSGNYEEETTSRTSVEGFRPASLEILDHVKINMTTPETAMSTIKGLLPSSKSDPSFSKKELRKAEEQISIALKEFYNKLRLLKSYSFLNLLAFSKIMKKYDKVSSRNTSKDYLKMVDSSYVGSSDEVNRLMERVEHAFIKHFANGNHRKGMNTLRPAVKKERHRITFLLGLFTGCSIALVVALIILIHARNILYSEGRTRYMDNIFPLYSLFGYIVLHMIMYSANVYLWRRYKINYPFIFGFKEGTELGYREVFLLSSGLAVLSLAAVLSNLDMEMDQRTKSFSALTELVPLGLVIVLLLITFSPFNIIYKSSRFFLIQCAFHSACAPLYKVNFPENFLADQLTSQVQAFRSLEFYVCYYFWGNFKTRSNKCLESDVYKAFYLIVAIIPFWIRCLQCFRRLLEERNTMHGLNGLKYISTVVALVLRTTNEFRRGMVWQILAATSSSIATIVNTYWDIVIDWGLLRRNSRNPWLREKLSVPNKSVYFVAMVLNVILRLAWMQSVLGIREAPFLHRTALTALVTCLEILRRGIWNFFRLENEHLNNVGNYRAFKSVPLPFNYEDDEENTVI*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
