Glyma09g36760 - SoyBase

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Report for Sequence Feature Glyma09g36760

Feature Type:	gene_model
Chromosome:	Gm09
Start:	42403532
stop:	42406341
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma09g36760

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G62290	AT	Annotation by Michelle Graham. TAIR10: nucleotide-sensitive chloride conductance regulator (ICln) family protein \| chr5:25019568-25020972 FORWARD LENGTH=228	SoyBase	E_val: 5.00E-80	ISS
GO:0000085	GO-bp	Annotation by Michelle Graham. GO Biological Process: G2 phase of mitotic cell cycle	SoyBase	N/A	ISS
GO:0000398	GO-bp	Annotation by Michelle Graham. GO Biological Process: mRNA splicing, via spliceosome	SoyBase	N/A	ISS
GO:0006626	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein targeting to mitochondrion	SoyBase	N/A	ISS
GO:0006821	GO-bp	Annotation by Michelle Graham. GO Biological Process: chloride transport	SoyBase	N/A	ISS
GO:0006884	GO-bp	Annotation by Michelle Graham. GO Biological Process: cell volume homeostasis	SoyBase	N/A	ISS
GO:0009640	GO-bp	Annotation by Michelle Graham. GO Biological Process: photomorphogenesis	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0005216	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ion channel activity	SoyBase	N/A	ISS
KOG3238	KOG	Chloride ion current inducer protein	JGI		ISS
PTHR21399	Panther	CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN	JGI		ISS
PF03517	PFAM	Nucleotide-sensitive chloride conductance regulator (ICln)	JGI		ISS
UniRef100_G7JP98	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Methylosome subunit pICln n=1 Tax=Medicago truncatula RepID=G7JP98_MEDTR	SoyBase	E_val: 8.00E-99	ISS
UniRef100_I1L5S0	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1L5S0_SOYBN	SoyBase	E_val: 7.00E-161	ISS

Expression Patterns of Glyma09g36760

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma09g36760 not represented in the dataset	Glyma09g36760 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma09g36760 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.09g233200	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma09g36760

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma09g36760

Limit To All Plant Sequences

>Glyma09g36760.3   sequence type=transcript   gene model=Glyma09g36760   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AAATATTACATTATTAACATTTAATTCTCAATTTTAGGGGGTGACCGGGGGAGGAGTGGATTTTCTCGGAGCCCGAAGACGAGCCTGACCCAAACCAAACGAAAACAGAACCCCTTTAAAATTAAACCCTAGCCTCGCAATTTCGAAAATTTTCACTCACTCCTCTTATTCTCAGAACAGAAAAGAGAAGAAGAAATGGTGTCAGGCGTGAGAGAGATAAGCTGTAGCGGAGAGCCAGTCCTTGACAGTGATAGCGGGGAGGAGTTGATGCAGGTACAAGCCGGCATAGACATTGTCCTCGGCGATCTTCCTCGTCAGTCCCCCGGCACGCTCTATATCACTAACAAGCAAGTAATATGGTTGAGTGATTTAGACAAGACTAAAGGATATGCCGTTGATTTTTTGTCTATCTCTCTCCATGCAGTCTCTAGAGACCCTGAAGCCTATCCTCTTCCTTGTTTATATACCCAGATTGATACAGGAGAAGCTGATGATGACCACACTGATTCTGAATCCATTCATATCCCACAAGATTTGTCCAACATCGCAGAGATGAGGCTCATTCCCTCTGATCCTACACAATTGGATTCTCTCTTTGCAATATTCTGCCAGTGTGCAGAGCTTAATCCAGAACCAAATGATGGGGAAGGAGAAGAACATGGTTGGTTTTTTAGTGCTGATCAGATGGGAGATGAAGAAGCAGAGGAAGAAGGTTATATCTCTCACCATCCAGCCAACTCTATTGGTCACTCAAATGGAAATCATGACCTAGCTCGTACAATACTTGAGCTTCAAATCAATGATCAAAGATTTGAGGATGCAGAAGAGATGGAGGATAATGGAGATGGCACCAATCGTTGAGTGTCTGTGTTTTCTCCAAAATAGCATTTTCTAGTCTGTACCAAAAGTCATCGACTGATTGTTGTGTAGTTTGGTTCTATATAATGTAATCCTATTATGAAACATCTGACCAGAGGCTTAGAGTTTTTTTATCTTGGACCTTCGTTTTTGTTTTTTTTTTTCCTGCAATAGAAAGCAGCTGGATACTGAGTTTAAAGCTGTATTATGTAGAACAGGAGAAGAAATTTGAAAATTGTTTGGATAGTTTATTGAGAAAGAATTTGCAAATAATTTTAGTGTATTTGGTTCTCCATCGTGAGCATTCCAACGCAGGCAAATGGAGAACCGTATCTCTTGATGTTTCCTGAGTAAATGTCTATTATAGGCTGCACTACATGCATAAACAAATAGAGAAATACTTACCGTCTTGTCGAATTACAAATTGAC

Coding sequences of Glyma09g36760

Limit To All Plant Sequences

>Glyma09g36760.2   sequence type=CDS   gene model=Glyma09g36760   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTGTCAGGCGTGAGAGAGATAAGCTGTAGCGGAGAGCCAGTCCTTGACAGTGATAGCGGGGAGGAGTTGATGCAGGTACAAGCCGGCATAGACATTGTCCTCGGCGATCTTCCTCGTCAGTCCCCCGGCACGCTCTATATCACTAACAAGCAAGTAATATGGTTGAGTGATTTAGACAAGACTAAAGGATATGCCGTTGATTTTTTGTCTATCTCTCTCCATGCAGTCTCTAGAGACCCTGAAGCCTATCCTCTTCCTTGTTTATATACCCAGATTGATACAGGAGAAGCTGATGATGACCACACTGATTCTGAATCCATTCATATCCCACAAGATTTGTCCAACATCGCAGAGATGAGGCTCATTCCCTCTGATCCTACACAATTGGATTCTCTCTTTGCAATATTCTGCCAGTGTGCAGAGCTTAATCCAGAACCAAATGATGGGGAAGGAGAAGAACATGGTTGGTTTTTTAGTGCTGATCAGATGGGAGATGAAGAAGCAGAGGAAGAAGGTTATATCTCTCACCATCCAGCCAACTCTATTGGTCACTCAAATGGAAATCATGACCTAGCTCGTACAATACTTGAGCTTCAAATCAATGATCAAAGATTTGAGGATGCAGAAGAGATGGAGGATAATGGAGATGGCACCAATCGTTGA

>Glyma09g36760.3   sequence type=CDS   gene model=Glyma09g36760   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTGTCAGGCGTGAGAGAGATAAGCTGTAGCGGAGAGCCAGTCCTTGACAGTGATAGCGGGGAGGAGTTGATGCAGGTACAAGCCGGCATAGACATTGTCCTCGGCGATCTTCCTCGTCAGTCCCCCGGCACGCTCTATATCACTAACAAGCAAGTAATATGGTTGAGTGATTTAGACAAGACTAAAGGATATGCCGTTGATTTTTTGTCTATCTCTCTCCATGCAGTCTCTAGAGACCCTGAAGCCTATCCTCTTCCTTGTTTATATACCCAGATTGATACAGGAGAAGCTGATGATGACCACACTGATTCTGAATCCATTCATATCCCACAAGATTTGTCCAACATCGCAGAGATGAGGCTCATTCCCTCTGATCCTACACAATTGGATTCTCTCTTTGCAATATTCTGCCAGTGTGCAGAGCTTAATCCAGAACCAAATGATGGGGAAGGAGAAGAACATGGTTGGTTTTTTAGTGCTGATCAGATGGGAGATGAAGAAGCAGAGGAAGAAGGTTATATCTCTCACCATCCAGCCAACTCTATTGGTCACTCAAATGGAAATCATGACCTAGCTCGTACAATACTTGAGCTTCAAATCAATGATCAAAGATTTGAGGATGCAGAAGAGATGGAGGATAATGGAGATGGCACCAATCGTTGA

Predicted protein sequences of Glyma09g36760

Limit To All Plant Sequences

>Glyma09g36760.2   sequence type=predicted peptide   gene model=Glyma09g36760   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVSGVREISCSGEPVLDSDSGEELMQVQAGIDIVLGDLPRQSPGTLYITNKQVIWLSDLDKTKGYAVDFLSISLHAVSRDPEAYPLPCLYTQIDTGEADDDHTDSESIHIPQDLSNIAEMRLIPSDPTQLDSLFAIFCQCAELNPEPNDGEGEEHGWFFSADQMGDEEAEEEGYISHHPANSIGHSNGNHDLARTILELQINDQRFEDAEEMEDNGDGTNR*

>Glyma09g36760.3   sequence type=predicted peptide   gene model=Glyma09g36760   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVSGVREISCSGEPVLDSDSGEELMQVQAGIDIVLGDLPRQSPGTLYITNKQVIWLSDLDKTKGYAVDFLSISLHAVSRDPEAYPLPCLYTQIDTGEADDDHTDSESIHIPQDLSNIAEMRLIPSDPTQLDSLFAIFCQCAELNPEPNDGEGEEHGWFFSADQMGDEEAEEEGYISHHPANSIGHSNGNHDLARTILELQINDQRFEDAEEMEDNGDGTNR*

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