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Report for Sequence Feature Glyma09g32790

Feature Type:gene_model
Chromosome:Gm09
Start:39321004
stop:39328030
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma09g32790
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G51520AT Annotation by Michelle Graham. TAIR10: diacylglycerol acyltransferase family | chr3:19110739-19112518 FORWARD LENGTH=314 SoyBaseE_val: 1.00E-156ISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0004144GO-mf Annotation by Michelle Graham. GO Molecular Function: diacylglycerol O-acyltransferase activity SoyBaseN/AISS
GO:0016747GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups SoyBaseN/AISS
KOG0831 KOG Acyl-CoA:diacylglycerol acyltransferase (DGAT) JGI ISS
PTHR12317Panther DIACYLGLYCEROL O-ACYLTRANSFERASE JGI ISS
PF03982PFAM Diacylglycerol acyltransferase JGI ISS
UniRef100_G7K2N1UniRef Annotation by Michelle Graham. Most informative UniRef hit: Diacylglycerol O-acyltransferase n=1 Tax=Medicago truncatula RepID=G7K2N1_MEDTR SoyBaseE_val: 0ISS
UniRef100_I1L4N0UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1L4N0_SOYBN SoyBaseE_val: 0ISS

Proteins Associated with Glyma09g32790
LocusGene SymbolProtein Name
DGAT2A diacylglycerol acyltransferase 2 gene A

Expression Patterns of Glyma09g32790
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma09g32790 not represented in the dataset
Glyma09g32790 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma09g32790
ParalogEvidenceComments
Glyma16g21960 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma09g32790 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.09g195400 Wm82.a2.v1IGC As supplied by JGI

References for Glyma09g32790
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma09g32790
>Glyma09g32790.1   sequence type=CDS   gene model=Glyma09g32790   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCAGCGCACGGCGGCGGCGACAGATGAACCACGGCGGCGCTCCGGCGACGCGGAGGGGGAGAAGGTGTTCAAGGGGAGCGAGGTGTTCGGCGACACGTCACCAAATTACTTGAAGACCATTTTGGCCCTGGCGTTGTGGCTCGGAACCATTCATTTCAACGTCGCGTTGGTGCTCTTCGCAATCTTCTTCCTCTCTCTCCACAAAGCACTTTTGCTTTTCGGTTTGCTTTTCGTGCTCATGGTAATTCCTGTTGATGAAAAGAGCAAATTCGGTCGAAAATTATCCAGGTACATATGCAAGCACGTTTGCGCTTACTTTCCCATCACGCTTCATGTGGAGGACATGAAGGCCTTTCATCCCAATCGTGCTTATGTTTTTGGTTATGAACCACATTCAGTTTTGCCAATTGGAGTTGTTGCGTTAGCTGACAACACAGGTTTTATGCCTCTTCCTAAAATAAAAGTTCTTGCTAGCAGTGCGATATTTTACACACCATTTTTGAGACACATATGGACATGGTTGGGCTTAACACCAGTGACAAGGAAAAGGTTTACCTCCCTGTTGGATGCTGGCTATAGTTGTATCTTGATACCTGGTGGAGTGCAAGAAGCATTTCTCATGGAGCATGGTTCTGAGATTGCCTATCTTAAAGCAAGAAGGGGATTTGTCCGCATAGCAATGGAGAAAGGAAAACCCCTGGTTCCAGTTTTCTGCTTTGGTCAGTCAAATGTCTATAAGTGGTGGAAACCAGGTGGGAAGTTAATTCTGAATTTTGCAAGGGCTGTCAAGTTCTCCCCAATATATTTTTGGGGAATTTTTGGATCTCCGATACCCTTTAAACATCCGATGCATGTGGTGGTGGGTAGACCAATTGAGCTCGAGAAAAATCACGAGCCAACTCCTGAGGAGGTTGCCAGAATACATAGCCAATTTGTTGAAGCACTTCAAGATCTATTTGAACGACACAAAGCTCGAGCTGGATATCCAAACCTTGAGTTGAGAATTGTTTGA
Predicted protein sequences of Glyma09g32790
>Glyma09g32790.1   sequence type=predicted peptide   gene model=Glyma09g32790   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MQRTAAATDEPRRRSGDAEGEKVFKGSEVFGDTSPNYLKTILALALWLGTIHFNVALVLFAIFFLSLHKALLLFGLLFVLMVIPVDEKSKFGRKLSRYICKHVCAYFPITLHVEDMKAFHPNRAYVFGYEPHSVLPIGVVALADNTGFMPLPKIKVLASSAIFYTPFLRHIWTWLGLTPVTRKRFTSLLDAGYSCILIPGGVQEAFLMEHGSEIAYLKARRGFVRIAMEKGKPLVPVFCFGQSNVYKWWKPGGKLILNFARAVKFSPIYFWGIFGSPIPFKHPMHVVVGRPIELEKNHEPTPEEVARIHSQFVEALQDLFERHKARAGYPNLELRIV*






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