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SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT5G65930 | AT | Annotation by Michelle Graham. TAIR10: kinesin-like calmodulin-binding protein (ZWICHEL) | chr5:26370369-26376394 REVERSE LENGTH=1260 | SoyBase | E_val: 0 | ISS |
| GO:0007018 | GO-bp | Annotation by Michelle Graham. GO Biological Process: microtubule-based movement | SoyBase | N/A | ISS |
| GO:0009846 | GO-bp | Annotation by Michelle Graham. GO Biological Process: pollen germination | SoyBase | N/A | ISS |
| GO:0010091 | GO-bp | Annotation by Michelle Graham. GO Biological Process: trichome branching | SoyBase | N/A | ISS |
| GO:0055114 | GO-bp | Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process | SoyBase | N/A | ISS |
| GO:0005856 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoskeleton | SoyBase | N/A | ISS |
| GO:0005886 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane | SoyBase | N/A | ISS |
| GO:0003777 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: microtubule motor activity | SoyBase | N/A | ISS |
| GO:0003824 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: catalytic activity | SoyBase | N/A | ISS |
| GO:0005515 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein binding | SoyBase | N/A | ISS |
| GO:0005516 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: calmodulin binding | SoyBase | N/A | ISS |
| GO:0005524 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATP binding | SoyBase | N/A | ISS |
| GO:0008017 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: microtubule binding | SoyBase | N/A | ISS |
| GO:0016491 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity | SoyBase | N/A | ISS |
| GO:0016887 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATPase activity | SoyBase | N/A | ISS |
| KOG0239 | KOG | Kinesin (KAR3 subfamily) | JGI | ISS | |
| PTHR24115 | Panther | FAMILY NOT NAMED | JGI | ISS | |
| PTHR24115:SF172 | Panther | SUBFAMILY NOT NAMED | JGI | ISS | |
| PF00225 | PFAM | Kinesin motor domain | JGI | ISS | |
| PF00373 | PFAM | FERM central domain | JGI | ISS | |
| PF00784 | PFAM | MyTH4 domain | JGI | ISS | |
| PF09379 | PFAM | FERM N-terminal domain | JGI | ISS | |
| UniRef100_B9SRC0 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRC0_RICCO | SoyBase | E_val: 0 | ISS |
| UniRef100_UPI0002339013 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI0002339013 related cluster n=1 Tax=unknown RepID=UPI0002339013 | SoyBase | E_val: 0 | ISS |
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Glyma09g32740 not represented in the dataset |
Glyma09g32740 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.09g194900 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma09g32740.1 sequence type=CDS gene model=Glyma09g32740 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGATCACTGATGTGCCCCCATCTATGTCTCAAAACGGTAGGTCAAGCAGATATTCCTTTGGCTCTAGCAATGGCAATGGTGATACCCCTGCACAAAATGGTGCTGCTGTTATCAATGTTGATGACTATGATAGTGATAGCTCCAATTTTGCACCACCCACGCCATCAACTATGTCAATGGCTGTTCCAGCAGAACTTGCTGGAGCTGTACCCTTGATCAACAGATTCCAGGTGGATGGATTTTTAAAATTAATGCAGAAACAAATTCAATCTGCTGGGAAACGTGGATTTTTTTCTAAAAGATCTGTAGGGCCCCAAGTTCGAGAAAAAATTACATTTGAGGACATGTTGAGTTTTCAAAAGGATCCAATTCCAACATCACTGCTCAAGTTAAATGTTGATTTAGTAAGTCGGGCAACAAAATTATTCCAAATAATTTTGAAATATATGGGAATTGATCCATCAGATCGTGTAACTCCAATAAGCTTAGATGAACGAGTTGAGCTTGTAGGGAAACTGTACAAGCAAAGTTTGAAACGACCAGAACTCCGAGATGAACTTTTTGTTCAGATATCAAAGCAAACAAGAAATAACCCCGAGAGGCAATACTTGATTAAAGCATGGGAGCTCATGTATTTGTGTGCATCCTCAATGTCTCCTAGTAAAGACATTAGCAGTTATCTATCAGAATACATTCATAACATAGCAAATGGTGTGGGTACTGATTCTGAGATCCAAGTCCTTGCATTAAATACATTAAATGCTCTAAAGCATTCTGTCAAGGCTGGTCCCAGACATATAATTCCTGGGCGTGAGGAGATTGAAGCTCTGTTGACAGGGAGAAAGCTTACAACTATAGTGTTCTTCCTAGATGAAACATTTGAAGAAATTACATATGACATGTCAACCACAGTTGCCGATGCTGTTGAGGAACTTGCAGGGCTCATTAAACTGTCATCATATTCCAGCTTTAGTCTATTTGAATGTCGTAAAGTTGTTACTGGCTCCAAAGCACCTGATCTTGGGAATGAGGAGTACATTGGGTTAGATGAAAACAAATATATTGGGGATCTCCTGGTGGAATTCAAAGCTGCAAAGGATCGAAGTAAAGGAGAAATCTTGCACTGTAAACTGATATTCAAGAAAAAGTTATTTCGCGAGTCAGATGAAGCTGTGACAGAGCCTATGTTTGTGCAATTGTCTTATGTACAAATGCAACATGATTATATTTTGGGAAATTACCCTATTGGAAGGGATGATGCTGCTCAGCTCTCTGCATTACAAATTTTGGCTGAGATTGGATTTCTCAACACACCAGAATCATGCACTGACTGGAATTCACTTCTGGAGTGTTTCCTGCCTAGACAAATTTCAATGACACGAGCAAAACGCGAATGGGAGTATGACATTCTTTCTCGTTATCGTTCATTGGAGAATCTGACAAAAGATGATGCGCGGCAACAATTTCTGCGTATATTGAGAGCACTTCCTTATGGAAATTCTGTTTTCTTCAATGTTCGCAAGATTGATGATCCTATTGGACTTTTACCTGGTCGGATAATTTTGGGAATTAATAAAAGAGGGATTCATTTTTTCCGTCCAGTTCCTAAGGAATATTTGCACTCAGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGTAATACTGCAGTCTTCTTTAAAATGCGAGTTGCAGGTGTTCTCCACATATTCCAGTTTGAAACCAAGCAGGGAGAAGAAATTTGTGTAGCTCTTCAGACACATATAAATGATGTAATGCTGCGCCGTTATTCGAAAGCACGATCAGCTGCTGCTGGTGGTGGTTCTCTGAACGGAGACATTTCTAGTAATTCTAAACCTCCTAATATGGAATTATACGAGAAGCGTGTTCAAGAATTATCAAAACTTATTGAAGAATCTCAAAAAAATGCTGATCAACTGCTTGAAGAATTACGTGTGAAGCAAAAACAAGAAGAGAAAATGCAAGAAGAATTGGATGATTTGAAAGAATCCTTAAAAGCTGATAAGCAAAATCTGGATGCAGTTACAAGTGACCGTAATAGACTTTTATCATTATGCAATGAAAAAGATAAGGAACTACAGGCTGCTATTCTAGACAAAAGGAATATGGAATCTAGGATGTCCAAGTTAAATAATGCGGTGATAGAGAACACTGCCAAAAAGGATCTTGCTAATGCTGGAAATAGACAAGTGACTCAAAAGCTTGAAGATGAGCTAAAAGTTTGCAAATATGAGCTGCTATCAGCCAATGAAACTATCAAAAGCTTGAAAAGTGAAAAATTGGTTTTGGAACAGAAGTTATCTGCACTTCAAACGAGGAATGCTGGAGAGATTAGTTCCCTTCAATGGAAACTTGAGCAAGAACGCAAAGTTGTGAAGTCTGAAGCATATGAGCTTGAAAGAAAGATAGAAGGTTGTAGGCAAGAATTATTGGTTGCTAAGGCTACCATTTCAATGAAGGACTCTGAGTTGGCTGCATTGCAGAATAATTTGAAGGAATTGGAAGAATTGAGAGAAATGAAAGAGGATATCGACAGAAAGAATGAACAAACAGCTGCCATACTGAAAATGCAAGGGGCTCAATTAGCTGAAATGGAAACACTTTATAAGGAAGAACAGGTTTTAAGGAAGCGCTATTTTAATGTAATAGAAGACATGAAGGGCAAGATCAGAGTTTACTGTCGACTAAGACCTCTTAGTGAAAAAGAGATTGCTGAGAAAGAAAGAGAAGTTCTTACTGCCACTGATGAGTTTACAGTTGAATACCCATGGAAAGATGATAAACTGAAGCAGTACATATATGACCGAGTTTTTGATGCCGATGCAACTCAAGAAAGCGTATTTGAGGATACAAAGTATTTGGTGCAGTCTGCTGTAGATGGTTATAATGTTTGCATATTTGCCTATGGTCAAACTGGCTCTGGAAAGACATTTACAATCTATGGATCTGACAACAACCCTGGACTTACCCCTCGTGCAATTGCAGAACTTTTTAGAATTTTAAGAAGAGATAATAACAAGTATTCTTTTTCCTTAAAGGCATACATGGTGGAGTTGTATCAGGATACCCTTATAGATCTGTTACCAAAGAATGGAAAGCATTTAAAATTGGATATCAAGAAGGATTCAACGGGAATGGTAGTTGTGGAAAATGTGACAGTTATGTCTATTTCTACAATTGAAGAATTGAATAGTATAATACAAAGAGGATCTGAACGACGACATATATCTGGAACCCAAATGAACGATGAAAGTTCAAGATCTCATCTCATTCTATCGATTGTAATTGAAAGTACCAACCTTCAAAGTCAGTCAGTTGCAAGGGGAAAGCTGAGTTTTGTGGATCTTGCTGGTTCAGAAAGAGTGAAAAAGTCAGGTTCTACTGGGAGTCAGCTTAAGGAAGCTCAAAGCATTAACAAGTCATTATCAGCACTTGGAGATGTTATTAGTTCTTTGTCTTCTGGTGGTCAACACACACCATACAGGAATCACAAGTTAACCATGTTGATGAGTGATTCACTTGGTGGTAATGCCAAAACTCTCATGTTTGTGAATGTTTCTCCTGCAGAATCAAATTTGGACGAGACAAATAACTCTCTTATGTACGCCTCACGAGTGAGATCCATTGTGAATGACCCCAGCAAAAATGTTTCCTCAAAAGAGGTAGCACGACTGAAGAAGTTGGTTGCATATTGGAAACAACAAGCTGGTAGAGGACTTGAGTATGATGATTTAGAAGAAATTCAAGATGAAAGACCAACTAAGGAGAATGGTAATGGCAATAGGTAA
>Glyma09g32740.1 sequence type=predicted peptide gene model=Glyma09g32740 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MITDVPPSMSQNGRSSRYSFGSSNGNGDTPAQNGAAVINVDDYDSDSSNFAPPTPSTMSMAVPAELAGAVPLINRFQVDGFLKLMQKQIQSAGKRGFFSKRSVGPQVREKITFEDMLSFQKDPIPTSLLKLNVDLVSRATKLFQIILKYMGIDPSDRVTPISLDERVELVGKLYKQSLKRPELRDELFVQISKQTRNNPERQYLIKAWELMYLCASSMSPSKDISSYLSEYIHNIANGVGTDSEIQVLALNTLNALKHSVKAGPRHIIPGREEIEALLTGRKLTTIVFFLDETFEEITYDMSTTVADAVEELAGLIKLSSYSSFSLFECRKVVTGSKAPDLGNEEYIGLDENKYIGDLLVEFKAAKDRSKGEILHCKLIFKKKLFRESDEAVTEPMFVQLSYVQMQHDYILGNYPIGRDDAAQLSALQILAEIGFLNTPESCTDWNSLLECFLPRQISMTRAKREWEYDILSRYRSLENLTKDDARQQFLRILRALPYGNSVFFNVRKIDDPIGLLPGRIILGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAAAGGGSLNGDISSNSKPPNMELYEKRVQELSKLIEESQKNADQLLEELRVKQKQEEKMQEELDDLKESLKADKQNLDAVTSDRNRLLSLCNEKDKELQAAILDKRNMESRMSKLNNAVIENTAKKDLANAGNRQVTQKLEDELKVCKYELLSANETIKSLKSEKLVLEQKLSALQTRNAGEISSLQWKLEQERKVVKSEAYELERKIEGCRQELLVAKATISMKDSELAALQNNLKELEELREMKEDIDRKNEQTAAILKMQGAQLAEMETLYKEEQVLRKRYFNVIEDMKGKIRVYCRLRPLSEKEIAEKEREVLTATDEFTVEYPWKDDKLKQYIYDRVFDADATQESVFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSDNNPGLTPRAIAELFRILRRDNNKYSFSLKAYMVELYQDTLIDLLPKNGKHLKLDIKKDSTGMVVVENVTVMSISTIEELNSIIQRGSERRHISGTQMNDESSRSHLILSIVIESTNLQSQSVARGKLSFVDLAGSERVKKSGSTGSQLKEAQSINKSLSALGDVISSLSSGGQHTPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETNNSLMYASRVRSIVNDPSKNVSSKEVARLKKLVAYWKQQAGRGLEYDDLEEIQDERPTKENGNGNR*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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