Glyma09g27760 - SoyBase

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Report for Sequence Feature Glyma09g27760

Feature Type:	gene_model
Chromosome:	Gm09
Start:	34725700
stop:	34727086
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma09g27760

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G23580	AT	Annotation by Michelle Graham. TAIR10: calmodulin-like domain protein kinase 9 \| chr5:7950388-7952433 REVERSE LENGTH=490	SoyBase	E_val: 2.00E-20	ISS
GO:0006468	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein phosphorylation	SoyBase	N/A	ISS
GO:0009738	GO-bp	Annotation by Michelle Graham. GO Biological Process: abscisic acid mediated signaling pathway	SoyBase	N/A	ISS
GO:0004672	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein kinase activity	SoyBase	N/A	ISS
GO:0004674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity	SoyBase	N/A	ISS
GO:0004683	GO-mf	Annotation by Michelle Graham. GO Molecular Function: calmodulin-dependent protein kinase activity	SoyBase	N/A	ISS
GO:0005509	GO-mf	Annotation by Michelle Graham. GO Molecular Function: calcium ion binding	SoyBase	N/A	ISS
GO:0005524	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ATP binding	SoyBase	N/A	ISS
GO:0016301	GO-mf	Annotation by Michelle Graham. GO Molecular Function: kinase activity	SoyBase	N/A	ISS
GO:0016772	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups	SoyBase	N/A	ISS
PTHR24349	Panther	SERINE/THREONINE-PROTEIN KINASE	JGI		ISS
PTHR24349:SF13	Panther		JGI		ISS
UniRef100_Q84P29	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Seed calcium dependent protein kinase a n=1 Tax=Glycine max RepID=Q84P29_SOYBN	SoyBase	E_val: 3.00E-27	ISS
UniRef100_Q84P29	UniRef	Annotation by Michelle Graham. Best UniRef hit: Seed calcium dependent protein kinase a n=1 Tax=Glycine max RepID=Q84P29_SOYBN	SoyBase	E_val: 3.00E-27	ISS

Expression Patterns of Glyma09g27760

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma09g27760 not represented in the dataset	Glyma09g27760 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma09g27760 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.09g151300	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma09g27760

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma09g27760

Limit To All Plant Sequences

>Glyma09g27760.1   sequence type=CDS   gene model=Glyma09g27760   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAGGGCATTATGGCCTTTTCACACATATTTGTGGTTTCTTCTTTGATATTACTGATCTGCATATTATTACCTTCAGAATCTGAACCCGGGATCTTCCGACAGATTTTACTAGGAAAACTTGATTTTCACTCTGAGCGACACCCATGGATTGTTGATGACAACATTGCACCTAATAAACCTCTTGATTCTGCAGTTTTATCACGTCTGAAACAATTCTCTGCAATGAATAAATTGAAAAAGATGGCATTGCGTATGTATTTCAATGTATTGAAGGAAACAAAATTTAGAATTGGATATTTTAGTAACAAGTTTTCTTCTATGAGTTCTCAGTTTTCCTTGGTTCTAAAGGTTATTACAAAACAGGTTAGACTAAAGTTAGTACCAAGAGTATTGTCTAATTTTTTTTCTTTCTCTTTTGATAAGTAG

Predicted protein sequences of Glyma09g27760

Limit To All Plant Sequences

>Glyma09g27760.1   sequence type=predicted peptide   gene model=Glyma09g27760   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKGIMAFSHIFVVSSLILLICILLPSESEPGIFRQILLGKLDFHSERHPWIVDDNIAPNKPLDSAVLSRLKQFSAMNKLKKMALRMYFNVLKETKFRIGYFSNKFSSMSSQFSLVLKVITKQVRLKLVPRVLSNFFSFSFDK*

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