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Report for Sequence Feature Glyma09g27533

Feature Type:gene_model
Chromosome:Gm09
Start:34386205
stop:34393083
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G14150AT Annotation by Michelle Graham. TAIR10: phragmoplast-associated kinesin-related protein 1 | chr4:8158645-8165008 REVERSE LENGTH=1292 SoyBaseE_val: 4.00E-43ISS
GO:0000087GO-bp Annotation by Michelle Graham. GO Biological Process: M phase of mitotic cell cycle SoyBaseN/AISS
GO:0000226GO-bp Annotation by Michelle Graham. GO Biological Process: microtubule cytoskeleton organization SoyBaseN/AISS
GO:0000280GO-bp Annotation by Michelle Graham. GO Biological Process: nuclear division SoyBaseN/AISS
GO:0000911GO-bp Annotation by Michelle Graham. GO Biological Process: cytokinesis by cell plate formation SoyBaseN/AISS
GO:0000914GO-bp Annotation by Michelle Graham. GO Biological Process: phragmoplast assembly SoyBaseN/AISS
GO:0006260GO-bp Annotation by Michelle Graham. GO Biological Process: DNA replication SoyBaseN/AISS
GO:0006270GO-bp Annotation by Michelle Graham. GO Biological Process: DNA replication initiation SoyBaseN/AISS
GO:0006275GO-bp Annotation by Michelle Graham. GO Biological Process: regulation of DNA replication SoyBaseN/AISS
GO:0006306GO-bp Annotation by Michelle Graham. GO Biological Process: DNA methylation SoyBaseN/AISS
GO:0006346GO-bp Annotation by Michelle Graham. GO Biological Process: methylation-dependent chromatin silencing SoyBaseN/AISS
GO:0008283GO-bp Annotation by Michelle Graham. GO Biological Process: cell proliferation SoyBaseN/AISS
GO:0010389GO-bp Annotation by Michelle Graham. GO Biological Process: regulation of G2/M transition of mitotic cell cycle SoyBaseN/AISS
GO:0031048GO-bp Annotation by Michelle Graham. GO Biological Process: chromatin silencing by small RNA SoyBaseN/AISS
GO:0042023GO-bp Annotation by Michelle Graham. GO Biological Process: DNA endoreduplication SoyBaseN/AISS
GO:0051225GO-bp Annotation by Michelle Graham. GO Biological Process: spindle assembly SoyBaseN/AISS
GO:0051322GO-bp Annotation by Michelle Graham. GO Biological Process: anaphase SoyBaseN/AISS
GO:0051567GO-bp Annotation by Michelle Graham. GO Biological Process: histone H3-K9 methylation SoyBaseN/AISS
GO:0051726GO-bp Annotation by Michelle Graham. GO Biological Process: regulation of cell cycle SoyBaseN/AISS
GO:0055046GO-bp Annotation by Michelle Graham. GO Biological Process: microgametogenesis SoyBaseN/AISS
GO:0080175GO-bp Annotation by Michelle Graham. GO Biological Process: phragmoplast microtubule organization SoyBaseN/AISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0009524GO-cc Annotation by Michelle Graham. GO Cellular Compartment: phragmoplast SoyBaseN/AISS
GO:0003777GO-mf Annotation by Michelle Graham. GO Molecular Function: microtubule motor activity SoyBaseN/AISS
GO:0005515GO-mf Annotation by Michelle Graham. GO Molecular Function: protein binding SoyBaseN/AISS
GO:0008574GO-mf Annotation by Michelle Graham. GO Molecular Function: plus-end-directed microtubule motor activity SoyBaseN/AISS
PTHR24115Panther FAMILY NOT NAMED JGI ISS
PTHR24115:SF82Panther SUBFAMILY NOT NAMED JGI ISS
PF00225PFAM Kinesin motor domain JGI ISS
UniRef100_G7JBC6UniRef Annotation by Michelle Graham. Most informative UniRef hit: Kinesin-like protein KIF15 n=1 Tax=Medicago truncatula RepID=G7JBC6_MEDTR SoyBaseE_val: 9.00E-51ISS
UniRef100_UPI000233F582UniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233F582 related cluster n=1 Tax=unknown RepID=UPI000233F582 SoyBaseE_val: 7.00E-76ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma09g27533 not represented in the dataset

Glyma09g27533 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.09g149500 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma09g27533.1   sequence type=CDS   gene model=Glyma09g27533   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGGCCATTGTCTTCGGACAAGGACGAAGGAGATCCCACAGTTCAGAAGGTTTTCAATGATTCCTTGTCCATTAATGGATACAATTTCACCTTCGACTCCGTTGCTGACATGGCGGCTACTCAGCTGGATATTTTCGAACACGTTAGGGTGCCTCTAGTGGAGCATTGTTTGGTTGGGTTCAATAATTGTGGGAAGACTTATACAATGTGGGGTCCTGCCAATTGTTTATCGCATGAAAATGATCAACAAGGACTTGCCCCCCGTGTTTTTCAGCAACTCTTTGCACGCATAAGTGAAGAGCAAACTAAGCATTCTGAAAACCAACTCAGCTATCAGTGCCACTGCTCTTTTCTTGAGGTTGATTGTCTCTTAATTGTTTCTTTTTGTGTTCCTGACCTACTTAACAATTTTAGTTTAGTCCTTTTGGCACAAAGTTTGTTTTTGCAGATATACAATGAGCCAATCATGGATTTGTTGGATCCAAATCAGAAAAACCTACAGGAATGGAGCAAGGAACTTATCCTCCTTGGGCACATGGTCCCGGTTATGTGGTCTCAGTTGATATCACGAGGACGATGTCCAAGAAATTCAGACATAACCATTTGA

>Glyma09g27533.1   sequence type=predicted peptide   gene model=Glyma09g27533   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MRPLSSDKDEGDPTVQKVFNDSLSINGYNFTFDSVADMAATQLDIFEHVRVPLVEHCLVGFNNCGKTYTMWGPANCLSHENDQQGLAPRVFQQLFARISEEQTKHSENQLSYQCHCSFLEVDCLLIVSFCVPDLLNNFSLVLLAQSLFLQIYNEPIMDLLDPNQKNLQEWSKELILLGHMVPVMWSQLISRGRCPRNSDITI*







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