|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G62090 | AT | Annotation by Michelle Graham. TAIR10: SEUSS-like 2 | chr5:24935221-24938540 REVERSE LENGTH=816 | SoyBase | E_val: 2.00E-49 | ISS |
GO:0009790 | GO-bp | Annotation by Michelle Graham. GO Biological Process: embryo development | SoyBase | N/A | ISS |
GO:0048467 | GO-bp | Annotation by Michelle Graham. GO Biological Process: gynoecium development | SoyBase | N/A | ISS |
GO:0048481 | GO-bp | Annotation by Michelle Graham. GO Biological Process: ovule development | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0003674 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: molecular function | SoyBase | N/A | ISS |
PTHR10378 | Panther | LIM DOMAIN BINDING PROTEIN-RELATED | JGI | ISS | |
PTHR10378:SF6 | Panther | JGI | ISS | ||
UniRef100_B9R9G2 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Transcriptional corepressor SEUSS, putative n=1 Tax=Ricinus communis RepID=B9R9G2_RICCO | SoyBase | E_val: 5.00E-93 | ISS |
UniRef100_I1L3D8 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1L3D8_SOYBN | SoyBase | E_val: 0 | ISS |
Glyma09g27000 not represented in the dataset |
Glyma09g27000 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma09g27000.1 sequence type=CDS gene model=Glyma09g27000 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high CTAAATGAGTTGGGCTTTTCTAAAAGATATGTGAGATGTTTGCAAATTTCGGAAGTTGTCAATAGCATGAAAGACCTAATAGATATCTGTGCTGAGCACAAAATTGGGGCAATTGAGAGCTTAAAAAATTATCCTCGACTTGCGACAGCCTCAAAGCACCAGATGCAAAAGATGCAGGAAATGGAACAGCTAGGAAATGTTCAATGTCTGCCAACTGATCAAAACACACTCAATAAGCTAATGGCTCTGAATCCTGGATTGAACAACCATATAAACAACTCTCATAATATGGTAAATCGTGGTGCTTTGAGTGGGTCAGCCCAAGCAGCTTTAGCACTGAACAACTACCAAAATCTTCTCATGAGGCAAAATTCAACGAATTCTAGCCCTGGCTCACTTCAGCGTGAAGGGTCCTCTTTCAATAATTCAAACCAGAGTCCCTCTTCAGCTTTGCAAGGAGCTAGTCCTGCTTTAATTTCAGGCTCAATGCAGAATTCATCTGTTAGTGGTTTCCCAAGTCCCCATCTACCCCCACAGCAGCAGCAACACCACCTACAACAGCGCTCATTAAGTTCAAATGCTTTACTGCAACAAAATCATTCTCATGGTTCCCAAGGAAATCAAGCTCTACAGCAGCAGCAGATGATCCATCAACTGCTGCAGGAGATGTCAAATAACAATGGGGGAATGCAACCACTGTCTCTTGGTGGACCCAATGCAAAGAATGCAATGGGTTTTGGAGGCCATACTCCATCCTTAAGCGGAGGTTCTGCCAATGTTCCAGGAAACAATGGACCTATGTCAAGGATTAATAGCTTCAAAACAGCTTCAAATAGTGATTCTTCTGCAGTTGGTGGCAACAACCGATTCAATCAGAGAACATCTGAGATGCCACAACATTTGCAAAATGTGGTTCAGGATATTGGCAATGAATTCACGGATAATCCCTTCTTAAACAGTGATCTTGATGATAACATGGGTTTTGGCTGGAAGGCATGA
>Glyma09g27000.1 sequence type=predicted peptide gene model=Glyma09g27000 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high LNELGFSKRYVRCLQISEVVNSMKDLIDICAEHKIGAIESLKNYPRLATASKHQMQKMQEMEQLGNVQCLPTDQNTLNKLMALNPGLNNHINNSHNMVNRGALSGSAQAALALNNYQNLLMRQNSTNSSPGSLQREGSSFNNSNQSPSSALQGASPALISGSMQNSSVSGFPSPHLPPQQQQHHLQQRSLSSNALLQQNHSHGSQGNQALQQQQMIHQLLQEMSNNNGGMQPLSLGGPNAKNAMGFGGHTPSLSGGSANVPGNNGPMSRINSFKTASNSDSSAVGGNNRFNQRTSEMPQHLQNVVQDIGNEFTDNPFLNSDLDDNMGFGWKA*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||