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Report for Sequence Feature Glyma09g26731

Feature Type:gene_model
Chromosome:Gm09
Start:33286155
stop:33286376
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
ATCG00350AT Annotation by Michelle Graham. TAIR10: Photosystem I, PsaA/PsaB protein | chrC:39605-41857 REVERSE LENGTH=750 SoyBaseE_val: 2.00E-39ISS
GO:0006091GO-bp Annotation by Michelle Graham. GO Biological Process: generation of precursor metabolites and energy SoyBaseN/AISS
GO:0006354GO-bp Annotation by Michelle Graham. GO Biological Process: DNA-dependent transcription, elongation SoyBaseN/AISS
GO:0015979GO-bp Annotation by Michelle Graham. GO Biological Process: photosynthesis SoyBaseN/AISS
GO:0019684GO-bp Annotation by Michelle Graham. GO Biological Process: photosynthesis, light reaction SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0009522GO-cc Annotation by Michelle Graham. GO Cellular Compartment: photosystem I SoyBaseN/AISS
GO:0009534GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast thylakoid SoyBaseN/AISS
GO:0009535GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast thylakoid membrane SoyBaseN/AISS
GO:0009538GO-cc Annotation by Michelle Graham. GO Cellular Compartment: photosystem I reaction center SoyBaseN/AISS
GO:0009579GO-cc Annotation by Michelle Graham. GO Cellular Compartment: thylakoid SoyBaseN/AISS
GO:0009941GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast envelope SoyBaseN/AISS
GO:0010287GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plastoglobule SoyBaseN/AISS
GO:0016020GO-cc Annotation by Michelle Graham. GO Cellular Compartment: membrane SoyBaseN/AISS
GO:0016021GO-cc Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane SoyBaseN/AISS
GO:0016168GO-mf Annotation by Michelle Graham. GO Molecular Function: chlorophyll binding SoyBaseN/AISS
GO:0046872GO-mf Annotation by Michelle Graham. GO Molecular Function: metal ion binding SoyBaseN/AISS
PF00223PFAM Photosystem I psaA/psaB protein JGI ISS
UniRef100_Q9TNK0UniRef Annotation by Michelle Graham. Best UniRef hit: Photosystem I P700 apoprotein A1 (Fragment) n=1 Tax=Sphagnum fallax RepID=Q9TNK0_9BRYO SoyBaseE_val: 1.00E-39ISS
UniRef100_Q9TNK0UniRef Annotation by Michelle Graham. Most informative UniRef hit: Photosystem I P700 apoprotein A1 (Fragment) n=1 Tax=Sphagnum fallax RepID=Q9TNK0_9BRYO SoyBaseE_val: 1.00E-39ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma09g26731 not represented in the dataset

Glyma09g26731 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma09g26731.1   sequence type=CDS   gene model=Glyma09g26731   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GTTTTTAGTGCCCATTTCGGCCAACTTTCTATCATCTTTCTTTGGCTGAGTGGCATGTATTTTCATGGTGCTCGCTTTTTCAATTATGAGGCATGGTTAAGTGATCCTACTCGCATTAGGCCTAGTGCTCAGGTGATTTGGCCAATAGTGGGCCAAGAAATATTGAATGGTGATGTAGGGGGAGGGTTTCGAGGAATACAAATAACCTCCGATTATTTTTAG

>Glyma09g26731.1   sequence type=predicted peptide   gene model=Glyma09g26731   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
VFSAHFGQLSIIFLWLSGMYFHGARFFNYEAWLSDPTRIRPSAQVIWPIVGQEILNGDVGGGFRGIQITSDYF*







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