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Report for Sequence Feature Glyma09g23680

Feature Type:gene_model
Chromosome:Gm09
Start:29305482
stop:29306870
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma09g23680
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G50920AT Annotation by Michelle Graham. TAIR10: Nucleolar GTP-binding protein | chr1:18870555-18872570 FORWARD LENGTH=671 SoyBaseE_val: 2.00E-14ISS
GO:0001510GO-bp Annotation by Michelle Graham. GO Biological Process: RNA methylation SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0016020GO-cc Annotation by Michelle Graham. GO Cellular Compartment: membrane SoyBaseN/AISS
GO:0000166GO-mf Annotation by Michelle Graham. GO Molecular Function: nucleotide binding SoyBaseN/AISS
GO:0005525GO-mf Annotation by Michelle Graham. GO Molecular Function: GTP binding SoyBaseN/AISS
PTHR11702Panther DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED JGI ISS
UniRef100_I1LQJ7UniRef Annotation by Michelle Graham. Best UniRef hit: Nucleolar GTP-binding protein 1 n=1 Tax=Glycine max RepID=I1LQJ7_SOYBN SoyBaseE_val: 2.00E-13ISS
UniRef100_I1LQJ7UniRef Annotation by Michelle Graham. Most informative UniRef hit: Nucleolar GTP-binding protein 1 n=1 Tax=Glycine max RepID=I1LQJ7_SOYBN SoyBaseE_val: 2.00E-13ISS

Expression Patterns of Glyma09g23680
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma09g23680 not represented in the dataset
Glyma09g23680 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma09g23680 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma09g23680
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma09g23680
>Glyma09g23680.1   sequence type=CDS   gene model=Glyma09g23680   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTTCAGTACAATCTTAAGAAGATTACCGTTGTGCCAAATGGGAAGGACGTGGTCGACATCATCCTCTCTCGCACCCAGCGTCAAACACCAACCGTTGTGCACAAATGGTTCATGTTTTTGATATTTTTTTTTTATTATGATGCAAATGAATATTTTTACTATCAGAAAAAGATGAAATTGCCACTTCTTGTGGCAATGATTCTTCCAAAAATCCGCTTTCGAATGATTTTATCCGATTTAAACCCTTTTGGAAAATTATACCAAGAAAAGCTCTGGTGGCAACATCATCAATTAGTAGCTAGTATTTCTCCCTCTAAGGGAATTTATATTTTATGTATTGGAATAATTTGTTCTCGTTTTCTTCTGTTCCAGACAATCAGATTTAGTTCTGGACAGTGGAATTCACAATCTACCTTACCTACAAATCAATCCTTGATTTGGTACAAGATAATCTTTAGGAACATAATGTCTCTTTGCACTTATTTGGTTCCCTTTGTTGGTTTATGGAGTGTTCCATTTCCTGTTTACTCAACTGTAAAATTAAGGGAATGCTATTATGGGAAAAATGATTTTGCTGGATTATACTATTTTATCTTTTTCTTAAGCTTTGGTTGGTGCGTGATGGGATCAGTGACAAAGTGGGGAGAAGACTGA
Predicted protein sequences of Glyma09g23680
>Glyma09g23680.1   sequence type=predicted peptide   gene model=Glyma09g23680   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVQYNLKKITVVPNGKDVVDIILSRTQRQTPTVVHKWFMFLIFFFYYDANEYFYYQKKMKLPLLVAMILPKIRFRMILSDLNPFGKLYQEKLWWQHHQLVASISPSKGIYILCIGIICSRFLLFQTIRFSSGQWNSQSTLPTNQSLIWYKIIFRNIMSLCTYLVPFVGLWSVPFPVYSTVKLRECYYGKNDFAGLYYFIFFLSFGWCVMGSVTKWGED*






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