SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT2G04865 | AT | Annotation by Michelle Graham. TAIR10: Aminotransferase-like, plant mobile domain family protein | chr2:1712149-1714599 FORWARD LENGTH=667 | SoyBase | E_val: 5.00E-22 | ISS |
| GO:0008150 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biological process | SoyBase | N/A | ISS |
| GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
| GO:0003674 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: molecular function | SoyBase | N/A | ISS |
| PTHR11668 | Panther | SERINE/THREONINE PROTEIN PHOSPHATASE | JGI | ISS | |
| PTHR11668:SF94 | Panther | SUBFAMILY NOT NAMED | JGI | ISS | |
| PF10536 | PFAM | Plant mobile domain | JGI | ISS | |
| UniRef100_D3G9M4 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: IMP dehydrogenase/GMP reductase n=1 Tax=Glycine max RepID=D3G9M4_SOYBN | SoyBase | E_val: 2.00E-69 | ISS |
| UniRef100_I1L2V8 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1L2V8_SOYBN | SoyBase | E_val: 0 | ISS |
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Glyma09g21910 not represented in the dataset |
Glyma09g21910 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma09g21910.1 sequence type=CDS gene model=Glyma09g21910 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGTTAGAACACGAGGTTTAGGTCGTGCTATAGGTAGGGTTATAGGCAGAGATAGACAGGATGAGGATGATGCAGTTGATGTTCCACAGAGGCGTAAGCCTACTGCATCAGCCCGTAGGCAACAGGTTCAACAAATGACTGAGGATGTTTCTCACATGACTGAGGATGTCCCTCATATGGCTGAGGATGCACCTGAGATGACTACGGACATACAGGCGATTGTTGCAGAGGACTTAGGTCGTGATGGTGCTGAGGGGTCACATGCTGATGATGCTGAGGGATTCCGAGGTGGGCCACGTGACCCATCAGTGCTGACTTCATTTGTAGACCATGTTGCAAATGCCATTTGGAGTGGACAAGAACGTCCTAAGTTGAAGTTGGTGTCCCACGGGAGGAAGGTGATGTTAATTGGGAGACTTATATCCGCATTTGTGGAGAGGTGGCACAGGGAGACCAGTACCTTCCACCTTTCAGTAGGAGAGTTGACGATCACACTGGATGATGTTTTGTCACTCCTCCATCTGCCTATCAGTGGCGCCTTCCACAGCTTTCATGCTCTTTCAGTGGACGAGGCGGTATTTTTGTTGATAGAGTTGCTTGAGGCACGACGATGGATTGTAGCAGCTCGTGCTTATCTACTGCACCTGGTGGGTTGCACTCTTTCTTCTAAGAAGAGTGCAACATATGTTCATGTGTTAGATGAAGCTTCTAGGACCACAACACGACAGATTGAGGGGTACCTGACTTTATTACAGTGCTGGATCTATGAGCACTTTCCAAGTGTGCATCAGTGCGTCACAGATGATGCGTACGAGGAGACGTCCCCACGTGCTTCCCGGTGGCTGACGACAAAGGCGCATATGAAAGGAATTACAGGAGCGTCGTACCAGGCATGTTGTGATGCTTTGACGGTCACAGATGTGTGTTGGTTGCCTTACAGTGAGCATCGAGGGGTTAGGGGGTTTGAGCTGATTTCATCGTTCCAGGGTCAGCTGAGATGGGATCCTATGGTGGTCACAGTTCGACCGAAGAGGGTGCTACGACAGTTTGGTTACATTCAGAGCATCCCTTCGCCGCCTGTTAGCGCTTTGTTGTCATATGATGATATAGATGACATGTGGATGCATTTCGCAGACCACGTACTAGCTGTGGGTGACCAACCCAGACATGTACCTGCCCCAGACCATGAGGACTACATGCAGCCGACCATCCCACAGGTTCCAGTGGCATTTGACCCCCCTCGACATGCAGTGGATGATTACGAAGGCTATGAGGCAATCCCAGAAAGGTTTAAGTGTGTGCTCAACCTTAGGATGGTCACTGCAGGCACAGAGTTACATGATATTATGCAAGATTGTCTCACGATCGCTAGGGGGGTGCCAGTGCAGATGGAAGTGTCAGGGCTCGACAGAGACAACGCACAGACCATTGATTATTGTTTTTATGTTTTGTAG
>Glyma09g21910.1 sequence type=predicted peptide gene model=Glyma09g21910 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MVRTRGLGRAIGRVIGRDRQDEDDAVDVPQRRKPTASARRQQVQQMTEDVSHMTEDVPHMAEDAPEMTTDIQAIVAEDLGRDGAEGSHADDAEGFRGGPRDPSVLTSFVDHVANAIWSGQERPKLKLVSHGRKVMLIGRLISAFVERWHRETSTFHLSVGELTITLDDVLSLLHLPISGAFHSFHALSVDEAVFLLIELLEARRWIVAARAYLLHLVGCTLSSKKSATYVHVLDEASRTTTRQIEGYLTLLQCWIYEHFPSVHQCVTDDAYEETSPRASRWLTTKAHMKGITGASYQACCDALTVTDVCWLPYSEHRGVRGFELISSFQGQLRWDPMVVTVRPKRVLRQFGYIQSIPSPPVSALLSYDDIDDMWMHFADHVLAVGDQPRHVPAPDHEDYMQPTIPQVPVAFDPPRHAVDDYEGYEAIPERFKCVLNLRMVTAGTELHDIMQDCLTIARGVPVQMEVSGLDRDNAQTIDYCFYVL*
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