Glyma09g21150 - SoyBase

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Report for Sequence Feature Glyma09g21150

Feature Type:	gene_model
Chromosome:	Gm09
Start:	26066005
stop:	26077167
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma09g21150

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G60620	AT	Annotation by Michelle Graham. TAIR10: glycerol-3-phosphate acyltransferase 9 \| chr5:24367266-24369647 FORWARD LENGTH=376	SoyBase	E_val: 0	ISS
GO:0006301	GO-bp	Annotation by Michelle Graham. GO Biological Process: postreplication repair	SoyBase	N/A	ISS
GO:0006651	GO-bp	Annotation by Michelle Graham. GO Biological Process: diacylglycerol biosynthetic process	SoyBase	N/A	ISS
GO:0006655	GO-bp	Annotation by Michelle Graham. GO Biological Process: phosphatidylglycerol biosynthetic process	SoyBase	N/A	ISS
GO:0008152	GO-bp	Annotation by Michelle Graham. GO Biological Process: metabolic process	SoyBase	N/A	ISS
GO:0019432	GO-bp	Annotation by Michelle Graham. GO Biological Process: triglyceride biosynthetic process	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0005783	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: endoplasmic reticulum	SoyBase	N/A	ISS
GO:0005886	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane	SoyBase	N/A	ISS
GO:0016020	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: membrane	SoyBase	N/A	ISS
GO:0016746	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring acyl groups	SoyBase	N/A	ISS
KOG2898	KOG	Predicted phosphate acyltransferase, contains PlsC domain	JGI		ISS
PTHR23063	Panther	ACETYLTRANSFERASE-RELATED	JGI		ISS
PTHR23063:SF2	Panther	ACYLTRANSFERASE-LIKE PROTEIN 4	JGI		ISS
PF01553	PFAM	Acyltransferase	JGI		ISS
UniRef100_C9WGL0	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Glycerol-3-phosphate acyltransferase 9 n=1 Tax=Vernicia fordii RepID=C9WGL0_VERFO	SoyBase	E_val: 0	ISS
UniRef100_I1L2T5	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1L2T5_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma09g21150

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma09g21150 not represented in the dataset	Glyma09g21150 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma09g21150 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.09g119200	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma09g21150

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma09g21150

Limit To All Plant Sequences

>Glyma09g21150.2   sequence type=transcript   gene model=Glyma09g21150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CAAAAACTGAGGTGCATAAGTTAATATTAACTTATAGAAAAAGTTTGATATATTTTGTTTTTTTTCCTTCTTCTACAAGTACTTACAGAGAAGTTTATACAAATAGAGTCTCATTGTGTTTGTGCAGCATCAGTTTTTGTTAATTTGTGTGGAAGATGTAACTAAATAAGTGATTCTTGTGTAGAATAGATTAATAGAATGTAGTAAAGTTCTGACAGAGAAAACATCTTCACATGGCACTTTGCTGTTATTTTATATTAAAAGATGCTTGAGGAAAATGGGATGAGACTAGTGCCTAGTGTTTCTAGAGTCAATAGAGAAAAAAGTCATCTTTCTATTGTGGGATACAATTTGCTATCTCGCTCTTCAATTTGGACAACTAAAACAGGATCAAAAGTCTATATTAATCTCACTTATCCCTTCGAGAGAAGTCACTGGAAGAAGTGATTCCACAGCTTGGATGAATAACTCAGGGACACCCAAGTCTTCAAGTTCTGAATTGGATCTTGATCGACCCAACATTGAGGATTACCTCCCTTCAGGGTCCACCATTCAACAAGAACCTCATGGAAAGCTTTTCCTGCATGATTTGCTCAATATTTCTCCTACTTTGTCTGAGGCTGCAGGTGCTATTGTAGATGACTCATTCACAAGATGCTTCAAGTCAAATCCTCCAGAACCATGGAATTGGAATGTTTATTTGTTTCCTTTGTGGTGTTTTGGAGTTGTGATTCGATACTTGATTCTGTTCCCAATCAGGGTTATAGGGTTAACAATAGGATGGATAATATTTCTTTCATCCTTCATTCCGGTGCACTTCCTATTGAAAGGACATGACAAGTTAAGGAGAAGTATTGAGAGGTCTTTGGTAGAGATGATGTGCAGTTTCTTTGTTGCATCTTGGACTGGGGTTGTTAAGTATCATGGACCCAGGCCTAGCAGGAGACCAAAGCAGGTTTTTGTAGCCAACCATACTTCCATGATTGATTTCATTATCTTAGAACAGATGACTGCTTTTGCTGTTATTATGCAGAAGCATCCTGGATGGGTTGGATTATTGCAGAGTACCATTTTGGAGAGTCTAGGATGCATCTGGTTCAACCGTACAGAGGCAAAGGATCGGGAAATAGTAGCAAGGAAATTGAGGGATCATGTCCAGGGAGCTGATAACAACCCCCTTCTCATATTTCCTGAAGGAACTTGTGTAAATAATCACTATACAGTCATGTTCAAGAAGGGTGCATTTGAACTTGGCTGCACAGTTTGCCCAGTTGCAATCAAGTACAATAAGATTTTTGTAGATGCTTTTTGGAATAGTCGAAAGCAATCATTCACTATGCATCTGTTGCAGCTAATGACGTCTTGGGCAGTTGTTTGTGATGTTTGGTACTTGGAGCCACAAAATCTGAAGCCAGGAGAGACGCCTATTGAGTTCGCAGAGAGGGTGAGAGACATAATCTCAGTTCGTGCTGGCCTTAAAAAGGTTCCTTGGGATGGATATCTGAAGTATTCTCGTCCTAGCCCAAAGCATAGAGAAAGGAAGCAACAGAACTTTGCTGAGTCAGTGCTGCGGCGATGGGAGGAAAAGTGATGTGTACCTTTATGTGGTGTTGTTCTTAATTATTCTTAGTAATGCCATTCTTCGACCCCTTTTTTTCTTTTGTTTTGTCATTGCTACTATTTATTTTTACACTTTTATTAAGATATGCATATATCACTCAGTAACAAAGTTGTCCAGTAATTTTTTCCATGGATGGATGTTGTCTTGTACAAACTGTTGAGAACTAGATCTTTAATTAAGGATGAAATTTATGCTAATGTTAAATAAATTAGTCAAGTTCTATTAAGC

Coding sequences of Glyma09g21150

Limit To All Plant Sequences

>Glyma09g21150.1   sequence type=CDS   gene model=Glyma09g21150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAATAACTCAGGGACACCCAAGTCTTCAAGTTCTGAATTGGATCTTGATCGACCCAACATTGAGGATTACCTCCCTTCAGGGTCCACCATTCAACAAGAACCTCATGGAAAGCTTTTCCTGCATGATTTGCTCAATATTTCTCCTACTTTGTCTGAGGCTGCAGGTGCTATTGTAGATGACTCATTCACAAGATGCTTCAAGTCAAATCCTCCAGAACCATGGAATTGGAATGTTTATTTGTTTCCTTTGTGGTGTTTTGGAGTTGTGATTCGATACTTGATTCTGTTCCCAATCAGGGTTATAGGGTTAACAATAGGATGGATAATATTTCTTTCATCCTTCATTCCGGTGCACTTCCTATTGAAAGGACATGACAAGTTAAGGAGAAGTATTGAGAGGTCTTTGGTAGAGATGATGTGCAGTTTCTTTGTTGCATCTTGGACTGGGGTTGTTAAGTATCATGGACCCAGGCCTAGCAGGAGACCAAAGCAGGTTTTTGTAGCCAACCATACTTCCATGATTGATTTCATTATCTTAGAACAGATGACTGCTTTTGCTGTTATTATGCAGAAGCATCCTGGATGGGTTGGATTATTGCAGAGTACCATTTTGGAGAGTCTAGGATGCATCTGGTTCAACCGTACAGAGGCAAAGGATCGGGAAATAGTAGCAAGGAAATTGAGGGATCATGTCCAGGGAGCTGATAACAACCCCCTTCTCATATTTCCTGAAGGAACTTGTGTAAATAATCACTATACAGTCATGTTCAAGAAGGGTGCATTTGAACTTGGCTGCACAGTTTGCCCAGTTGCAATCAAGTACAATAAGATTTTTGTAGATGCTTTTTGGAATAGTCGAAAGCAATCATTCACTATGCATCTGTTGCAGCTAATGACGTCTTGGGCAGTTGTTTGTGATGTTTGGTACTTGGAGCCACAAAATCTGAAGCCAGGAGAGACGCCTATTGAGTTCGCAGAGAGGGTGAGAGACATAATCTCAGTTCGTGCTGGCCTTAAAAAGGTTCCTTGGGATGGATATCTGAAGTATTCTCGTCCTAGCCCAAAGCATAGAGAAAGGAAGCAACAGAACTTTGCTGAGTCAGTGCTGCGGCGATGGGAGGAAAAGTGA

>Glyma09g21150.2   sequence type=CDS   gene model=Glyma09g21150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAATAACTCAGGGACACCCAAGTCTTCAAGTTCTGAATTGGATCTTGATCGACCCAACATTGAGGATTACCTCCCTTCAGGGTCCACCATTCAACAAGAACCTCATGGAAAGCTTTTCCTGCATGATTTGCTCAATATTTCTCCTACTTTGTCTGAGGCTGCAGGTGCTATTGTAGATGACTCATTCACAAGATGCTTCAAGTCAAATCCTCCAGAACCATGGAATTGGAATGTTTATTTGTTTCCTTTGTGGTGTTTTGGAGTTGTGATTCGATACTTGATTCTGTTCCCAATCAGGGTTATAGGGTTAACAATAGGATGGATAATATTTCTTTCATCCTTCATTCCGGTGCACTTCCTATTGAAAGGACATGACAAGTTAAGGAGAAGTATTGAGAGGTCTTTGGTAGAGATGATGTGCAGTTTCTTTGTTGCATCTTGGACTGGGGTTGTTAAGTATCATGGACCCAGGCCTAGCAGGAGACCAAAGCAGGTTTTTGTAGCCAACCATACTTCCATGATTGATTTCATTATCTTAGAACAGATGACTGCTTTTGCTGTTATTATGCAGAAGCATCCTGGATGGGTTGGATTATTGCAGAGTACCATTTTGGAGAGTCTAGGATGCATCTGGTTCAACCGTACAGAGGCAAAGGATCGGGAAATAGTAGCAAGGAAATTGAGGGATCATGTCCAGGGAGCTGATAACAACCCCCTTCTCATATTTCCTGAAGGAACTTGTGTAAATAATCACTATACAGTCATGTTCAAGAAGGGTGCATTTGAACTTGGCTGCACAGTTTGCCCAGTTGCAATCAAGTACAATAAGATTTTTGTAGATGCTTTTTGGAATAGTCGAAAGCAATCATTCACTATGCATCTGTTGCAGCTAATGACGTCTTGGGCAGTTGTTTGTGATGTTTGGTACTTGGAGCCACAAAATCTGAAGCCAGGAGAGACGCCTATTGAGTTCGCAGAGAGGGTGAGAGACATAATCTCAGTTCGTGCTGGCCTTAAAAAGGTTCCTTGGGATGGATATCTGAAGTATTCTCGTCCTAGCCCAAAGCATAGAGAAAGGAAGCAACAGAACTTTGCTGAGTCAGTGCTGCGGCGATGGGAGGAAAAGTGA

Predicted protein sequences of Glyma09g21150

Limit To All Plant Sequences

>Glyma09g21150.1   sequence type=predicted peptide   gene model=Glyma09g21150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MNNSGTPKSSSSELDLDRPNIEDYLPSGSTIQQEPHGKLFLHDLLNISPTLSEAAGAIVDDSFTRCFKSNPPEPWNWNVYLFPLWCFGVVIRYLILFPIRVIGLTIGWIIFLSSFIPVHFLLKGHDKLRRSIERSLVEMMCSFFVASWTGVVKYHGPRPSRRPKQVFVANHTSMIDFIILEQMTAFAVIMQKHPGWVGLLQSTILESLGCIWFNRTEAKDREIVARKLRDHVQGADNNPLLIFPEGTCVNNHYTVMFKKGAFELGCTVCPVAIKYNKIFVDAFWNSRKQSFTMHLLQLMTSWAVVCDVWYLEPQNLKPGETPIEFAERVRDIISVRAGLKKVPWDGYLKYSRPSPKHRERKQQNFAESVLRRWEEK*

>Glyma09g21150.2   sequence type=predicted peptide   gene model=Glyma09g21150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MNNSGTPKSSSSELDLDRPNIEDYLPSGSTIQQEPHGKLFLHDLLNISPTLSEAAGAIVDDSFTRCFKSNPPEPWNWNVYLFPLWCFGVVIRYLILFPIRVIGLTIGWIIFLSSFIPVHFLLKGHDKLRRSIERSLVEMMCSFFVASWTGVVKYHGPRPSRRPKQVFVANHTSMIDFIILEQMTAFAVIMQKHPGWVGLLQSTILESLGCIWFNRTEAKDREIVARKLRDHVQGADNNPLLIFPEGTCVNNHYTVMFKKGAFELGCTVCPVAIKYNKIFVDAFWNSRKQSFTMHLLQLMTSWAVVCDVWYLEPQNLKPGETPIEFAERVRDIISVRAGLKKVPWDGYLKYSRPSPKHRERKQQNFAESVLRRWEEK*

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