SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT2G01350 | AT | Annotation by Michelle Graham. TAIR10: quinolinate phoshoribosyltransferase | chr2:165332-167209 REVERSE LENGTH=348 | SoyBase | E_val: 0 | ISS |
| GO:0009435 | GO-bp | Annotation by Michelle Graham. GO Biological Process: NAD biosynthetic process | SoyBase | N/A | ISS |
| GO:0019363 | GO-bp | Annotation by Michelle Graham. GO Biological Process: pyridine nucleotide biosynthetic process | SoyBase | N/A | ISS |
| GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
| GO:0003824 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: catalytic activity | SoyBase | N/A | ISS |
| GO:0004514 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: nicotinate-nucleotide diphosphorylase (carboxylating) activity | SoyBase | N/A | ISS |
| GO:0016763 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring pentosyl groups | SoyBase | N/A | ISS |
| KOG3008 | KOG | Quinolinate phosphoribosyl transferase | JGI | ISS | |
| PTHR11948 | Panther | NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE-RELATED | JGI | ISS | |
| PTHR11948:SF1 | Panther | NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE-RELATED | JGI | ISS | |
| PF01729 | PFAM | Quinolinate phosphoribosyl transferase, C-terminal domain | JGI | ISS | |
| PF02749 | PFAM | Quinolinate phosphoribosyl transferase, N-terminal domain | JGI | ISS | |
| UniRef100_B9SJ41 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Nicotinate-nucleotide pyrophosphorylase [carboxylating], putative n=1 Tax=Ricinus communis RepID=B9SJ41_RICCO | SoyBase | E_val: 0 | ISS |
| UniRef100_I1L2T1 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1L2T1_SOYBN | SoyBase | E_val: 0 | ISS |
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Glyma09g21050 not represented in the dataset |
Glyma09g21050 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.09g118600 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma09g21050.1 sequence type=CDS gene model=Glyma09g21050 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGCTATAAGCTGCGGCAAACAAGGATTCTTGCTATGGCCCGCTTTTCACACTAGAGAATCCACCACAGCGTTTCCACCTCCACTAAGCCTCTCACTTAAACTCCCACCGCAATCACATTCAAAAGTCAGGAGGGTTGTTAAAATGTCTGCAACTGAAGTCACAAGCTCTAGGATATCATACGAGTCCTTTGCAATAAAGCCTCCTGAGCACCCAACTTATGATTTGAAGGGCATTATCAAGCTAGCACTTGAAGAAGATGCTGGGGATCGAGGTGATGTAACATGCTTGGCCACCATTCCATTTGACATGGAAGTGGAAGCTTATTTTTTGGCAAAGGAGGATGGCATCATTGCTGGAATAGCTCTTGCAGAGATGATATTTCATGAGGTTGATCCTTCTCTGAAGGTGGAGTGGAGTAAAAATGATGGAGATTTTGTCCATAAAGGGCTACAGTTTGGAAGAGTTCGTGGACGGGCTCATAACATTGTTGTAGCTGAAAGAGTTGTGCTAAACTTTATGCAGAGGATGAGTGGCATTGCAACTTTAACTAAGGCAATGGCAAATGCAGCATACCCTGCATATATGTTGGAGACTAGAAAAACTGCTCCAGGTCTTCGTTTAGTGGATAAGTGGGCGGTATTAATTGGTGGAGGTCAGAACCATAGGATGGGTTTGTTTGATATGGTGATGATAAAAGATAATCATATATCAGCAGCTGGAGGTGTTGCTGATGCTCTTAAAGCTGTTGACCTGTATCTGGAGCAAAATAATCTTCAAATGGAGGTTGAGGTTGAGACCAGGACTCTTGAGGAAGTGGAAGAAGTTTTACATTATTCATCTCAAACAAAGACTTCTTTGACTCGAATAATGTTGGACAATATGGTTGTACCTCTACCAAATGGGGATGTGGACATATCTATGCTAAAAGAAGCTGTGCAGTTGATAAATGGGAGATATGAGACTGAGGCATCAGGCAATGTCACACTAGATACTGTACATAAAATTGGGCAAAGCGGAGTGACCTACATTTCTAGTGGTTCGTTGACTCATTCTGTGAAAGCACTAGACGTCTCCCTCAAAATTGATACCGAATTAGCACTCAAAGTTGGAAGGCGCACTGGACGAGCTTGA
>Glyma09g21050.1 sequence type=predicted peptide gene model=Glyma09g21050 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MAISCGKQGFLLWPAFHTRESTTAFPPPLSLSLKLPPQSHSKVRRVVKMSATEVTSSRISYESFAIKPPEHPTYDLKGIIKLALEEDAGDRGDVTCLATIPFDMEVEAYFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSKNDGDFVHKGLQFGRVRGRAHNIVVAERVVLNFMQRMSGIATLTKAMANAAYPAYMLETRKTAPGLRLVDKWAVLIGGGQNHRMGLFDMVMIKDNHISAAGGVADALKAVDLYLEQNNLQMEVEVETRTLEEVEEVLHYSSQTKTSLTRIMLDNMVVPLPNGDVDISMLKEAVQLINGRYETEASGNVTLDTVHKIGQSGVTYISSGSLTHSVKALDVSLKIDTELALKVGRRTGRA*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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