|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G57590 | AT | Annotation by Michelle Graham. TAIR10: adenosylmethionine-8-amino-7-oxononanoate transaminases | chr5:23318593-23322687 REVERSE LENGTH=833 | SoyBase | E_val: 2.00E-58 | ISS |
GO:0006260 | GO-bp | Annotation by Michelle Graham. GO Biological Process: DNA replication | SoyBase | N/A | ISS |
GO:0006270 | GO-bp | Annotation by Michelle Graham. GO Biological Process: DNA replication initiation | SoyBase | N/A | ISS |
GO:0006275 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of DNA replication | SoyBase | N/A | ISS |
GO:0006306 | GO-bp | Annotation by Michelle Graham. GO Biological Process: DNA methylation | SoyBase | N/A | ISS |
GO:0008283 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cell proliferation | SoyBase | N/A | ISS |
GO:0009102 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biotin biosynthetic process | SoyBase | N/A | ISS |
GO:0051567 | GO-bp | Annotation by Michelle Graham. GO Biological Process: histone H3-K9 methylation | SoyBase | N/A | ISS |
GO:0051726 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of cell cycle | SoyBase | N/A | ISS |
GO:0005739 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion | SoyBase | N/A | ISS |
GO:0004015 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: adenosylmethionine-8-amino-7-oxononanoate transaminase activity | SoyBase | N/A | ISS |
GO:0004141 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: dethiobiotin synthase activity | SoyBase | N/A | ISS |
PTHR11986 | Panther | AMINOTRANSFERASE CLASS III | JGI | ISS | |
PTHR11986:SF4 | Panther | gb def: mxcl [stigmatella aurantiaca] | JGI | ISS | |
UniRef100_G7JD16 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase-like protein n=1 Tax=Medicago truncatula RepID=G7JD16_MEDTR | SoyBase | E_val: 5.00E-71 | ISS |
UniRef100_UPI000233BAEE | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233BAEE related cluster n=1 Tax=unknown RepID=UPI000233BAEE | SoyBase | E_val: 9.00E-79 | ISS |
Glyma09g15575 not represented in the dataset |
Glyma09g15575 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma09g15575.1 sequence type=CDS gene model=Glyma09g15575 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGAACCAGTTATACAAGGTGCTGGTGGAATGCATATGGTTGATCCAGCTTTTCAGCGTGTGCTTGTTAAAGAGTGTCGAAGTAGAAAAATTCCAACTACGGTGGAGCTAATCCATTGTGTACCAGATATAGCTTGCTTTGGGAAGCTGATGACTGGTGAAATTATACCATTGGCTGTCACCTTGGCAACAAATGCTATTTTTGATTCATTTATTGGAGACTCAAAGTTATGGGATGATAAAATGGTTCACCGGATTTCATCATACCTTGCAATTCAAAGAGTAGTTGCTTTGGGAACTTTGTGTGCCTTGGAATTAAAAGCAGAAGGCAATAATGTCGAAGAAGCTAAGCTTAGGGAAGATGGTGTATACATGAGGCCTCTGGGTAATGTCATTTATCTGTTGTGTGGACCCAGCACATTTGCAGAAGTTTGCAATCAATTTACTCGCAAACTTCTTAGGCGGCTTGAAGAATTTGACGTATGTAAGAATTGA
>Glyma09g15575.1 sequence type=predicted peptide gene model=Glyma09g15575 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MEPVIQGAGGMHMVDPAFQRVLVKECRSRKIPTTVELIHCVPDIACFGKLMTGEIIPLAVTLATNAIFDSFIGDSKLWDDKMVHRISSYLAIQRVVALGTLCALELKAEGNNVEEAKLREDGVYMRPLGNVIYLLCGPSTFAEVCNQFTRKLLRRLEEFDVCKN*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||