Report for Sequence Feature Glyma09g15550
Feature Type: gene_model
Chromosome: Gm09
Start: 18234114
stop: 18244098
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma09g15550
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G08040 AT
Annotation by Michelle Graham. TAIR10: MATE efflux family protein | chr3:2566593-2569397 REVERSE LENGTH=526
SoyBase E_val: 0 ISS
GO:0006826 GO-bp
Annotation by Michelle Graham. GO Biological Process: iron ion transport
SoyBase N/A ISS
GO:0006855 GO-bp
Annotation by Michelle Graham. GO Biological Process: drug transmembrane transport
SoyBase N/A ISS
GO:0006879 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellular iron ion homeostasis
SoyBase N/A ISS
GO:0010106 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellular response to iron ion starvation
SoyBase N/A ISS
GO:0010167 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to nitrate
SoyBase N/A ISS
GO:0010413 GO-bp
Annotation by Michelle Graham. GO Biological Process: glucuronoxylan metabolic process
SoyBase N/A ISS
GO:0015706 GO-bp
Annotation by Michelle Graham. GO Biological Process: nitrate transport
SoyBase N/A ISS
GO:0045492 GO-bp
Annotation by Michelle Graham. GO Biological Process: xylan biosynthetic process
SoyBase N/A ISS
GO:0055085 GO-bp
Annotation by Michelle Graham. GO Biological Process: transmembrane transport
SoyBase N/A ISS
GO:0071281 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellular response to iron ion
SoyBase N/A ISS
GO:0071369 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellular response to ethylene stimulus
SoyBase N/A ISS
GO:0071732 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellular response to nitric oxide
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0016020 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: membrane
SoyBase N/A ISS
GO:0005215 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transporter activity
SoyBase N/A ISS
GO:0015137 GO-mf
Annotation by Michelle Graham. GO Molecular Function: citrate transmembrane transporter activity
SoyBase N/A ISS
GO:0015238 GO-mf
Annotation by Michelle Graham. GO Molecular Function: drug transmembrane transporter activity
SoyBase N/A ISS
GO:0015297 GO-mf
Annotation by Michelle Graham. GO Molecular Function: antiporter activity
SoyBase N/A ISS
KOG1347
KOG
Uncharacterized membrane protein, predicted efflux pump
JGI ISS
PTHR11206 Panther
MULTIDRUG RESISTANCE PUMP
JGI ISS
PTHR11206:SF3 Panther
ETHIONINE RESISTANCE GENE PRODUCT-RELATED
JGI ISS
PF01554 PFAM
MatE
JGI ISS
UniRef100_C1IIX4 UniRef
Annotation by Michelle Graham. Best UniRef hit: Ferric reductase defective 3b n=1 Tax=Glycine max RepID=C1IIX4_SOYBN
SoyBase E_val: 0 ISS
UniRef100_C1IIX4 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Ferric reductase defective 3b n=1 Tax=Glycine max RepID=C1IIX4_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma09g15550
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma09g15550
Paralog Evidence Comments
Glyma15g43021 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma09g15550 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.09g102800 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma09g15550
Transcripts of Glyma09g15550
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma09g15550.2 sequence type=transcript gene model=Glyma09g15550 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
AAATAGGTTTCACTGATCTTATAGTGATCTTTCAATGCTAGAAAAGTAGCACATTATTATATCCGCATGGTGATCAATATCAAACAAGCTTATTTTTTTATTTTGATGGATATCATGGACGAGAATGGAAGCTCAAGCAATGCACCAAAGAACAAGAGAAACCTTCCTGTCTCCGTTTTCTTCAAAGATGCAAGACATGTTTTCAAGATGGATTCCATTGCTAAGGAGATACTTGGGATTGCATTCCCATCTGCACTGGCTGTTGCTGCTGACCCAATTGCTTCTCTTATAGACACAGCATTCATAGGCCATTTGGGGCCCGTGGAGCTTGCTGCTGCAGGAGTGTCCATTGCTTTGTTCAACCAAGCTTCAAGGATTACCATCTTCCCTTTGGTTAGCATCACAACTTCCTTCGTAGCTGAGGAAAATACCATTGAAAAAATCAATACAGAAAAGAAGTTAAGTGATAAGGCTAAGTCCAAAGAACAAGTAATGCTCGATGATCATTCCCTTCAAGACATAGAGAAAGTTGCATCCAAAGAGAACAATGAGACTGAGAATGTGGAAATGAATGATTGCAATACAAGTATATGCAAGTCTACCTCTGATACTAGTAGTAGTAGCAGTAACAAGAGTGTGCCAAAAGATGGAAGGAAGAAGCGACACGTTGCTTCAGCATCCACAGCATTACTTTTTGGCACAATCCTTGGTCTCCTTCAAGCAACAACCCTTATATTTGCTGCAAAACCTCTATTAGCTGCAATGGGTCTAAAACCTGATTCTCCTATGCTAAACCCTGCTATTAAATACTTGAGATTGAGATCATTAGGTGCTCCAGCAGTGCTTTTGTCCTTGGCCATGCAAGGAATCTTTCGAGGATTCAAGGACACTACAACTCCTTTATATGTTATTCTTTCGGGGTATGCATTGAATGTCATTTTGGATCCCGTGCTTATCTTCTACTGCAAATTGGGCATCAAAGGTGCAGCCATTTCACATGTTCTCTCTCAGTACTTGATGGCATTGGCCCTCATGGTGATATTAACTAGAAAAGTGGATCTTGTACCTCCAAGCATTAAAGACTTGCAGATTTTTAGGTTTCTTAAAAATGGAGGTCTGTTGTTGGCAAGAGTAATAGCTGTTACATTCTGCCAGACCTTGGCAGCCTCATTGGCAGCAAGGTTTGGTCCAATTCCTATGGCTGCATTCCAAACCTGCTTGCAAGTGTGGCTCACATCTTCCCTTCTTGCTGATGGATTGGCTGTTGCTGTACAGGCAATTCTAGCTTGTTCCTTTGCTGAGAAAGACTATGAAAAGGTGCTTGTTGCAGCAACACGAACTCTCCAGATGAGTTTTGTTTTAGGAGTTGGATTGTCTTTTGCAGTTGGATTTGGATTGTACTTTGGAGCTGGAATCTTCTCCAAAAGTGTTCTTGTTGTGCACTTAATCAGAATAGGCCTCCCGTTTGTTGCTGCCACACAACCAATCAATTCATTAGCCTTTGTCTTTGATGGTGTGAACTATGGGGCATCTGATTTTGCATATTCTGCATACTCCTTGGTCACCGTGTCATTGGCAAGTGTTGCTTCATTGTTTCTTCTCTCTAAGAGCAAAGGTTTCGTTGGGATATGGATTGCACTAACCATCTACATGAGTCTTCGCATGTTTGCCGGTGTGTGGAGGATGGGAACAGGTACGGGACCATGGCGTTTTCTCAGAGGCCGCTCAATGTCTTGATGATGAGATGACATCTAACAAAAGAAATTTCATTGTTGAGCAGAAAATGTTTTGTATCACTTTTCACCATTTAGGACCAGTTGTCTTTATTCAAAACATGATTTATGCACTATACAACTATGGTGATAGTCTTATTATATATTATATTGGACGGGTTCATTTTACACTTGCAAGTGTTATATTCAAAGTATCTTTCTTTTTTTTTGGCCTATGTTTACTGTATGGTCTCTGTTTAATGATGTATCCTCTGCTTATTGTAATATTTTGTCGTATTTAGAAGATTATTCTTCGTACTGTTAGTAGTATGTAAACTCTGAGTGCATGTATACAAATGAGAAAAATAAATTACTTTTTTCAGTCATTCTGAGTT
Coding sequences of Glyma09g15550
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma09g15550.1 sequence type=CDS gene model=Glyma09g15550 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGACGAGAATGGAAGCTCAAGCAATGCACCAAAGAACAAGAGAAACCTTCCTGTCTCCGTTTTCTTCAAAGATGCAAGACATGTTTTCAAGATGGATTCCATTGCTAAGGAGATACTTGGGATTGCATTCCCATCTGCACTGGCTGTTGCTGCTGACCCAATTGCTTCTCTTATAGACACAGCATTCATAGGCCATTTGGGGCCCGTGGAGCTTGCTGCTGCAGGAGTGTCCATTGCTTTGTTCAACCAAGCTTCAAGGATTACCATCTTCCCTTTGGTTAGCATCACAACTTCCTTCGTAGCTGAGGAAAATACCATTGAAAAAATCAATACAGAAAAGAAGTTAAGTGATAAGGCTAAGTCCAAAGAACAAGTAATGCTCGATGATCATTCCCTTCAAGACATAGAGAAAGTTGCATCCAAAGAGAACAATGAGACTGAGAATGTGGAAATGAATGATTGCAATACAAGTATATGCAAGTCTACCTCTGATACTAGTAGTAGTAGCAGTAACAAGAGTGTGCCAAAAGATGGAAGGAAGAAGCGACACGTTGCTTCAGCATCCACAGCATTACTTTTTGGCACAATCCTTGGTCTCCTTCAAGCAACAACCCTTATATTTGCTGCAAAACCTCTATTAGCTGCAATGGGTCTAAAACCTGATTCTCCTATGCTAAACCCTGCTATTAAATACTTGAGATTGAGATCATTAGGTGCTCCAGCAGTGCTTTTGTCCTTGGCCATGCAAGGAATCTTTCGAGGATTCAAGGACACTACAACTCCTTTATATGTTATTCTTTCGGGGTATGCATTGAATGTCATTTTGGATCCCGTGCTTATCTTCTACTGCAAATTGGGCATCAAAGGTGCAGCCATTTCACATGTTCTCTCTCAGTACTTGATGGCATTGGCCCTCATGGTGATATTAACTAGAAAAGTGGATCTTGTACCTCCAAGCATTAAAGACTTGCAGATTTTTAGGTTTCTTAAAAATGGAGGTCTGTTGTTGGCAAGAGTAATAGCTGTTACATTCTGCCAGACCTTGGCAGCCTCATTGGCAGCAAGGTTTGGTCCAATTCCTATGGCTGCATTCCAAACCTGCTTGCAAGTGTGGCTCACATCTTCCCTTCTTGCTGATGGATTGGCTGTTGCTGTACAGGCAATTCTAGCTTGTTCCTTTGCTGAGAAAGACTATGAAAAGGTGCTTGTTGCAGCAACACGAACTCTCCAGATGAGTTTTGTTTTAGGAGTTGGATTGTCTTTTGCAGTTGGATTTGGATTGTACTTTGGAGCTGGAATCTTCTCCAAAAGTGTTCTTGTTGTGCACTTAATCAGAATAGGCCTCCCGTTTGTTGCTGCCACACAACCAATCAATTCATTAGCCTTTGTCTTTGATGGTGTGAACTATGGGGCATCTGATTTTGCATATTCTGCATACTCCTTGGTCACCGTGTCATTGGCAAGTGTTGCTTCATTGTTTCTTCTCTCTAAGAGCAAAGGTTTCGTTGGGATATGGATTGCACTAACCATCTACATGAGTCTTCGCATGTTTGCCGGTGTGTGGAGGATGGGAACAGGTACGGGACCATGGCGTTTTCTCAGAGGCCGCTCAATGTCTTGA
>Glyma09g15550.2 sequence type=CDS gene model=Glyma09g15550 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGATCAATATCAAACAAGCTTATTTTTTTATTTTGATGGATATCATGGACGAGAATGGAAGCTCAAGCAATGCACCAAAGAACAAGAGAAACCTTCCTGTCTCCGTTTTCTTCAAAGATGCAAGACATGTTTTCAAGATGGATTCCATTGCTAAGGAGATACTTGGGATTGCATTCCCATCTGCACTGGCTGTTGCTGCTGACCCAATTGCTTCTCTTATAGACACAGCATTCATAGGCCATTTGGGGCCCGTGGAGCTTGCTGCTGCAGGAGTGTCCATTGCTTTGTTCAACCAAGCTTCAAGGATTACCATCTTCCCTTTGGTTAGCATCACAACTTCCTTCGTAGCTGAGGAAAATACCATTGAAAAAATCAATACAGAAAAGAAGTTAAGTGATAAGGCTAAGTCCAAAGAACAAGTAATGCTCGATGATCATTCCCTTCAAGACATAGAGAAAGTTGCATCCAAAGAGAACAATGAGACTGAGAATGTGGAAATGAATGATTGCAATACAAGTATATGCAAGTCTACCTCTGATACTAGTAGTAGTAGCAGTAACAAGAGTGTGCCAAAAGATGGAAGGAAGAAGCGACACGTTGCTTCAGCATCCACAGCATTACTTTTTGGCACAATCCTTGGTCTCCTTCAAGCAACAACCCTTATATTTGCTGCAAAACCTCTATTAGCTGCAATGGGTCTAAAACCTGATTCTCCTATGCTAAACCCTGCTATTAAATACTTGAGATTGAGATCATTAGGTGCTCCAGCAGTGCTTTTGTCCTTGGCCATGCAAGGAATCTTTCGAGGATTCAAGGACACTACAACTCCTTTATATGTTATTCTTTCGGGGTATGCATTGAATGTCATTTTGGATCCCGTGCTTATCTTCTACTGCAAATTGGGCATCAAAGGTGCAGCCATTTCACATGTTCTCTCTCAGTACTTGATGGCATTGGCCCTCATGGTGATATTAACTAGAAAAGTGGATCTTGTACCTCCAAGCATTAAAGACTTGCAGATTTTTAGGTTTCTTAAAAATGGAGGTCTGTTGTTGGCAAGAGTAATAGCTGTTACATTCTGCCAGACCTTGGCAGCCTCATTGGCAGCAAGGTTTGGTCCAATTCCTATGGCTGCATTCCAAACCTGCTTGCAAGTGTGGCTCACATCTTCCCTTCTTGCTGATGGATTGGCTGTTGCTGTACAGGCAATTCTAGCTTGTTCCTTTGCTGAGAAAGACTATGAAAAGGTGCTTGTTGCAGCAACACGAACTCTCCAGATGAGTTTTGTTTTAGGAGTTGGATTGTCTTTTGCAGTTGGATTTGGATTGTACTTTGGAGCTGGAATCTTCTCCAAAAGTGTTCTTGTTGTGCACTTAATCAGAATAGGCCTCCCGTTTGTTGCTGCCACACAACCAATCAATTCATTAGCCTTTGTCTTTGATGGTGTGAACTATGGGGCATCTGATTTTGCATATTCTGCATACTCCTTGGTCACCGTGTCATTGGCAAGTGTTGCTTCATTGTTTCTTCTCTCTAAGAGCAAAGGTTTCGTTGGGATATGGATTGCACTAACCATCTACATGAGTCTTCGCATGTTTGCCGGTGTGTGGAGGATGGGAACAGGTACGGGACCATGGCGTTTTCTCAGAGGCCGCTCAATGTCTTGA
Predicted protein sequences of Glyma09g15550
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma09g15550.1 sequence type=predicted peptide gene model=Glyma09g15550 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MDENGSSSNAPKNKRNLPVSVFFKDARHVFKMDSIAKEILGIAFPSALAVAADPIASLIDTAFIGHLGPVELAAAGVSIALFNQASRITIFPLVSITTSFVAEENTIEKINTEKKLSDKAKSKEQVMLDDHSLQDIEKVASKENNETENVEMNDCNTSICKSTSDTSSSSSNKSVPKDGRKKRHVASASTALLFGTILGLLQATTLIFAAKPLLAAMGLKPDSPMLNPAIKYLRLRSLGAPAVLLSLAMQGIFRGFKDTTTPLYVILSGYALNVILDPVLIFYCKLGIKGAAISHVLSQYLMALALMVILTRKVDLVPPSIKDLQIFRFLKNGGLLLARVIAVTFCQTLAASLAARFGPIPMAAFQTCLQVWLTSSLLADGLAVAVQAILACSFAEKDYEKVLVAATRTLQMSFVLGVGLSFAVGFGLYFGAGIFSKSVLVVHLIRIGLPFVAATQPINSLAFVFDGVNYGASDFAYSAYSLVTVSLASVASLFLLSKSKGFVGIWIALTIYMSLRMFAGVWRMGTGTGPWRFLRGRSMS*
>Glyma09g15550.2 sequence type=predicted peptide gene model=Glyma09g15550 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVINIKQAYFFILMDIMDENGSSSNAPKNKRNLPVSVFFKDARHVFKMDSIAKEILGIAFPSALAVAADPIASLIDTAFIGHLGPVELAAAGVSIALFNQASRITIFPLVSITTSFVAEENTIEKINTEKKLSDKAKSKEQVMLDDHSLQDIEKVASKENNETENVEMNDCNTSICKSTSDTSSSSSNKSVPKDGRKKRHVASASTALLFGTILGLLQATTLIFAAKPLLAAMGLKPDSPMLNPAIKYLRLRSLGAPAVLLSLAMQGIFRGFKDTTTPLYVILSGYALNVILDPVLIFYCKLGIKGAAISHVLSQYLMALALMVILTRKVDLVPPSIKDLQIFRFLKNGGLLLARVIAVTFCQTLAASLAARFGPIPMAAFQTCLQVWLTSSLLADGLAVAVQAILACSFAEKDYEKVLVAATRTLQMSFVLGVGLSFAVGFGLYFGAGIFSKSVLVVHLIRIGLPFVAATQPINSLAFVFDGVNYGASDFAYSAYSLVTVSLASVASLFLLSKSKGFVGIWIALTIYMSLRMFAGVWRMGTGTGPWRFLRGRSMS*