Glyma09g14350 - SoyBase

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Report for Sequence Feature Glyma09g14350

Feature Type:	gene_model
Chromosome:	Gm09
Start:	16309771
stop:	16311864
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma09g14350

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G69480	AT	Annotation by Michelle Graham. TAIR10: EXS (ERD1/XPR1/SYG1) family protein \| chr1:26114187-26117479 REVERSE LENGTH=777	SoyBase	E_val: 5.00E-20	ISS
GO:0006817	GO-bp	Annotation by Michelle Graham. GO Biological Process: phosphate ion transport	SoyBase	N/A	ISS
GO:0008150	GO-bp	Annotation by Michelle Graham. GO Biological Process: biological process	SoyBase	N/A	ISS
GO:0016036	GO-bp	Annotation by Michelle Graham. GO Biological Process: cellular response to phosphate starvation	SoyBase	N/A	ISS
GO:0005886	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane	SoyBase	N/A	ISS
GO:0016021	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane	SoyBase	N/A	ISS
GO:0003674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: molecular function	SoyBase	N/A	ISS
PTHR10783	Panther	XENOTROPIC AND POLYTROPIC MURINE LEUKEMIA VIRUS RECEPTOR	JGI		ISS
PTHR10783:SF4	Panther	XENOTROPIC AND POLYTROPIC MURINE LEUKEMIA VIRUS RECEPTOR XPR1	JGI		ISS
PF03105	PFAM	SPX domain	JGI		ISS
PF03321	PFAM	GH3 auxin-responsive promoter	JGI		ISS
UniRef100_G7JWG7	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Xenotropic and polytropic retrovirus receptor-like protein n=1 Tax=Medicago truncatula RepID=G7JWG7_MEDTR	SoyBase	E_val: 2.00E-22	ISS
UniRef100_UPI000233C49C	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233C49C related cluster n=1 Tax=unknown RepID=UPI000233C49C	SoyBase	E_val: 5.00E-31	ISS

Expression Patterns of Glyma09g14350

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma09g14350 not represented in the dataset	Glyma09g14350 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma09g14350 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.09g098200	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma09g14350

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma09g14350

Limit To All Plant Sequences

>Glyma09g14350.1   sequence type=CDS   gene model=Glyma09g14350   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTCAAATATACACATAATAGTTAGCAAAAAGGAATCAGTTAGAGTTTTGAGAAGTTGTATCTCCTCTCTTGAGAGTGGGTTGGGAGCTATATACAAGGTGCAGAAGGATAAAGGTCAACTAAGGAGCTTACGGATATTCATCATAAGGCCTGGAGCTTTTGATCAGTTATCAGAATTAGCCATTAAAAATGGAACATCAGCTACTTCACAGCATAGTCACAAAAAGGTTTGGTTCCAAAAAGTTAAAGAGCAACTGAGACTTGTGTTTGTTGAGTTCTATCAGAAACTCCTCCATCTCAAAGATTACAGTTTTATGAACCTCTCAGCATTTTCCATGATCATGAAGAAGTACGAAAAGCATACATCAAGGGCAGCATCTGCAGCATACATGACAGTAGTGGATAACTCCTATGTGATACTTTCTCAGAACTTCATAGATTCATTGATGCATTTTCTAAAGTTAACTTTCTATTGGAGAAAGTGGAGTCTACCTTCATCAGAAACTTTACACACTCAAATCACAAAAAGGGGAGGAAGCTATTAA

Predicted protein sequences of Glyma09g14350

Limit To All Plant Sequences

>Glyma09g14350.1   sequence type=predicted peptide   gene model=Glyma09g14350   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSNIHIIVSKKESVRVLRSCISSLESGLGAIYKVQKDKGQLRSLRIFIIRPGAFDQLSELAIKNGTSATSQHSHKKVWFQKVKEQLRLVFVEFYQKLLHLKDYSFMNLSAFSMIMKKYEKHTSRAASAAYMTVVDNSYVILSQNFIDSLMHFLKLTFYWRKWSLPSSETLHTQITKRGGSY*

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