Report for Sequence Feature Glyma09g13250
Feature Type: gene_model
Chromosome: Gm09
Start: 14675287
stop: 14680244
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma09g13250
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G02050 AT
Annotation by Michelle Graham. TAIR10: sugar transporter protein 7 | chr4:898387-900095 REVERSE LENGTH=513
SoyBase E_val: 0 ISS
GO:0006810 GO-bp
Annotation by Michelle Graham. GO Biological Process: transport
SoyBase N/A ISS
GO:0055085 GO-bp
Annotation by Michelle Graham. GO Biological Process: transmembrane transport
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0016020 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: membrane
SoyBase N/A ISS
GO:0005215 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transporter activity
SoyBase N/A ISS
GO:0005351 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sugar:hydrogen symporter activity
SoyBase N/A ISS
GO:0015144 GO-mf
Annotation by Michelle Graham. GO Molecular Function: carbohydrate transmembrane transporter activity
SoyBase N/A ISS
GO:0022857 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transmembrane transporter activity
SoyBase N/A ISS
KOG0254
KOG
Predicted transporter (major facilitator superfamily)
JGI ISS
PTHR24063 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24063:SF213 Panther
JGI ISS
PF00083 PFAM
Sugar (and other) transporter
JGI ISS
UniRef100_G7K4G6 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Hexose transporter n=1 Tax=Medicago truncatula RepID=G7K4G6_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI000233D634 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233D634 related cluster n=1 Tax=unknown RepID=UPI000233D634
SoyBase E_val: 0 ISS
Expression Patterns of Glyma09g13250
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma09g13250
Paralog Evidence Comments
Glyma15g24710 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma09g13250 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.09g097100 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma09g13250
Coding sequences of Glyma09g13250
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma09g13250.2 sequence type=CDS gene model=Glyma09g13250 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGATGACTTTCTTATAGAGTTCTTCCCCTCAATATATAGACAAAAAAAGCATGCACATGAAAACAACTACTGCAAATATGACAACCAAGGCCTTGCAGCATTTACCTCTTCTCTGTACATTGTTGGTTTAGTTGCATCCCTGATGGCATCTCCCGTGACAAGAAAATATGGACGACGAGCAAGTATCATAGGTGGCGGCATCAGTTTTCTTATTGGATCAGCTCTGAATGCTTCAGCTATTAACCTGATAATGCTGATCTTAGGTCAGGTCATGCTTGGTGTTGGCATTGGATTTGGAAATCAAGCTATTCCGCTTTATTTGTCAAAGATGGCACCAACACACCTTCGAGGAGGCCTGAACATGATGTTCCAAGTTGCAACCACTTTTGGAATTTTCACAGCTAACATGATCAATTTTGGAACACAAAAGATCAAGCCTTGGTGTTGGAGGTTGTCCCTAGGCTTGGCTGCAGTACCGTTGGCAAACTCGATAAAGCACCCATTTCGTAACATCCTTGAAAGAAGGTACAGGCCAGAGTTGGTGATGGTAATCTTCATGCCTACCTTTCAGATCCCGACTGGCATAAATTCCATTCTCTTATATGCTCCAGTGTTGTTTCAAAGCATGGGATTTGGAGGAGATGCATCACTCATCTCTCCAGCTTTGACCGGTGGAGTTTTTCTTGCTAGTTCAACATTCATTTCCTTAGTAACTCTTGATAGGTTTGGCAGAAGAGTTCTTCTTGTCAATGGTGGAGTACAAATGATCACATGTCAGACAGTTCCTAGTGAGATATTTCCATTGGAAATCCGGTCAGCTGGGCAGGGCATAACAGTTGCTGTAAACCTTTTCTTCACTTTCATAATTGCCTCGGCCTTCCTTGCTCTTCTCTGCTCATTCAAGTTTGGGATCTTTTTCTTCTTTGCTGGCTGGATTACCATCATGACCATATTTGTTTACCTTTTCCTACTTGAAACCAAAGGGATTCCCATTGAGGAGATGTCATTTATGTGGAGGAAGCACTGGTTCTGGAAAAGGATTTGCCTCCCAATTGATGGTAGTATCTGA
Predicted protein sequences of Glyma09g13250
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma09g13250.2 sequence type=predicted peptide gene model=Glyma09g13250 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MDDFLIEFFPSIYRQKKHAHENNYCKYDNQGLAAFTSSLYIVGLVASLMASPVTRKYGRRASIIGGGISFLIGSALNASAINLIMLILGQVMLGVGIGFGNQAIPLYLSKMAPTHLRGGLNMMFQVATTFGIFTANMINFGTQKIKPWCWRLSLGLAAVPLANSIKHPFRNILERRYRPELVMVIFMPTFQIPTGINSILLYAPVLFQSMGFGGDASLISPALTGGVFLASSTFISLVTLDRFGRRVLLVNGGVQMITCQTVPSEIFPLEIRSAGQGITVAVNLFFTFIIASAFLALLCSFKFGIFFFFAGWITIMTIFVYLFLLETKGIPIEEMSFMWRKHWFWKRICLPIDGSI*