Glyma09g12811 - SoyBase

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Report for Sequence Feature Glyma09g12811

Feature Type:	gene_model
Chromosome:	Gm09
Start:	13777087
stop:	13777597
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma09g12811

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
UniRef100_D9ZJD3	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: TCP domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJD3_MALDO	SoyBase	E_val: 2.00E-08	ISS
UniRef100_UPI0002339CB9	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI0002339CB9 related cluster n=1 Tax=unknown RepID=UPI0002339CB9	SoyBase	E_val: 2.00E-34	ISS

Expression Patterns of Glyma09g12811

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma09g12811 not represented in the dataset	Glyma09g12811 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma09g12811 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma09g12811

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma09g12811

Limit To All Plant Sequences

>Glyma09g12811.1   sequence type=CDS   gene model=Glyma09g12811   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAGGGAGGCGAGGATCTCCACCACCACCACTACCATCAGAACAACTTCCCATTCCAGCTACTTGAGAAGAAAGAAGACCAAGAAACCGCCTCATGCTCCACCTCCTCCCTTTACCCTTCCCTACGCAGTTCCGGCTCCTTCATGTCTGTCCCCTCCCAGCTCCGATCCTCCTACTTCAACCCCAATTTCTCCCTCCAACAACATCAACGTAGAACCTTCTTCCTCAGCATAGCCTGTTCCTCTGACAATACCAACAACAACACATCAACACTTCTCAATTTCCAATCCAACACCCTTAACACCACCATGTTGCAGCAGCAAGCCAAACCGGAGCTTAGCAACGATGGCGTGCCATCTTGCTTAGACATTTCAGACACCATTGTCTAA

Predicted protein sequences of Glyma09g12811

Limit To All Plant Sequences

>Glyma09g12811.1   sequence type=predicted peptide   gene model=Glyma09g12811   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKGGEDLHHHHYHQNNFPFQLLEKKEDQETASCSTSSLYPSLRSSGSFMSVPSQLRSSYFNPNFSLQQHQRRTFFLSIACSSDNTNNNTSTLLNFQSNTLNTTMLQQQAKPELSNDGVPSCLDISDTIV*

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