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Report for Sequence Feature Glyma09g11650

Feature Type:gene_model
Chromosome:Gm09
Start:11796986
stop:11797507
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma09g11650
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G67050AT Annotation by Michelle Graham. TAIR10: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38320.1); Has 617 Blast hits to 318 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 141; Fungi - 62; Plants - 128; Viruses - 2; Other Eukaryotes - 268 (source: NCBI BLink). | chr1:25028862-25029656 REVERSE LENGTH=264 SoyBaseE_val: 3.00E-15ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0009741GO-bp Annotation by Michelle Graham. GO Biological Process: response to brassinosteroid stimulus SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
UniRef100_I1L261UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1L261_SOYBN SoyBaseE_val: 2.00E-113ISS
UniRef100_Q9FZH6UniRef Annotation by Michelle Graham. Most informative UniRef hit: F1O19.11 protein n=2 Tax=Arabidopsis thaliana RepID=Q9FZH6_ARATH SoyBaseE_val: 1.00E-12ISS

Expression Patterns of Glyma09g11650
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma09g11650 not represented in the dataset
Glyma09g11650 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma09g11650 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.09g088800 Wm82.a2.v1IGC As supplied by JGI

References for Glyma09g11650
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma09g11650
>Glyma09g11650.1   sequence type=CDS   gene model=Glyma09g11650   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGGGGCTACACATTATTACTGGCATTAACAGGTTGGTGGGATAAGGGGCATGCTGTATTTAAAAGCCCCAAAGAAAGCAAGTGTTTAAATGATAAACTATACGATCAGAAGCAAAGTTCAAAGTCCTTTTGGAACTTTAAGAGAAGTAGTAGTTGTGGAACTGGACCTAGAAGGAGTTTTTGTCCTTTGCCACTTCTATCTAGAAGCAATTCAACTGGATCATCAACACCAAGTGTTAAGAGGAATCCACTTTCAAAGGAGGGTGTTAACAACATTAAACACAAACATTCTTCCACAAGGTTGCCTCATCACTCCTTTGTACCAAACAACTATCATCATCATCAAAAGCCTCCATTGAATTACAAGACTCATCATGGATCTTATGGTACCAGTGTAAGAGTCAATCCTGTCCTAAATATTCCTCCTGCAAAGCTATTTGGTTTGGCTTCAATCTTCTCCAACAATAGAGACAAGAGCAAGAAGTAG
Predicted protein sequences of Glyma09g11650
>Glyma09g11650.1   sequence type=predicted peptide   gene model=Glyma09g11650   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGGYTLLLALTGWWDKGHAVFKSPKESKCLNDKLYDQKQSSKSFWNFKRSSSCGTGPRRSFCPLPLLSRSNSTGSSTPSVKRNPLSKEGVNNIKHKHSSTRLPHHSFVPNNYHHHQKPPLNYKTHHGSYGTSVRVNPVLNIPPAKLFGLASIFSNNRDKSKK*






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