|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G50030 | AT | Annotation by Michelle Graham. TAIR10: target of rapamycin | chr1:18522626-18539619 REVERSE LENGTH=2454 | SoyBase | E_val: 7.00E-30 | ISS |
GO:0000911 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cytokinesis by cell plate formation | SoyBase | N/A | ISS |
GO:0007062 | GO-bp | Annotation by Michelle Graham. GO Biological Process: sister chromatid cohesion | SoyBase | N/A | ISS |
GO:0007131 | GO-bp | Annotation by Michelle Graham. GO Biological Process: reciprocal meiotic recombination | SoyBase | N/A | ISS |
GO:0007155 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cell adhesion | SoyBase | N/A | ISS |
GO:0009303 | GO-bp | Annotation by Michelle Graham. GO Biological Process: rRNA transcription | SoyBase | N/A | ISS |
GO:0009407 | GO-bp | Annotation by Michelle Graham. GO Biological Process: toxin catabolic process | SoyBase | N/A | ISS |
GO:0009790 | GO-bp | Annotation by Michelle Graham. GO Biological Process: embryo development | SoyBase | N/A | ISS |
GO:0009791 | GO-bp | Annotation by Michelle Graham. GO Biological Process: post-embryonic development | SoyBase | N/A | ISS |
GO:0009793 | GO-bp | Annotation by Michelle Graham. GO Biological Process: embryo development ending in seed dormancy | SoyBase | N/A | ISS |
GO:0009880 | GO-bp | Annotation by Michelle Graham. GO Biological Process: embryonic pattern specification | SoyBase | N/A | ISS |
GO:0009887 | GO-bp | Annotation by Michelle Graham. GO Biological Process: organ morphogenesis | SoyBase | N/A | ISS |
GO:0009888 | GO-bp | Annotation by Michelle Graham. GO Biological Process: tissue development | SoyBase | N/A | ISS |
GO:0010072 | GO-bp | Annotation by Michelle Graham. GO Biological Process: primary shoot apical meristem specification | SoyBase | N/A | ISS |
GO:0010090 | GO-bp | Annotation by Michelle Graham. GO Biological Process: trichome morphogenesis | SoyBase | N/A | ISS |
GO:0010228 | GO-bp | Annotation by Michelle Graham. GO Biological Process: vegetative to reproductive phase transition of meristem | SoyBase | N/A | ISS |
GO:0010431 | GO-bp | Annotation by Michelle Graham. GO Biological Process: seed maturation | SoyBase | N/A | ISS |
GO:0010507 | GO-bp | Annotation by Michelle Graham. GO Biological Process: negative regulation of autophagy | SoyBase | N/A | ISS |
GO:0010638 | GO-bp | Annotation by Michelle Graham. GO Biological Process: positive regulation of organelle organization | SoyBase | N/A | ISS |
GO:0030307 | GO-bp | Annotation by Michelle Graham. GO Biological Process: positive regulation of cell growth | SoyBase | N/A | ISS |
GO:0033044 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of chromosome organization | SoyBase | N/A | ISS |
GO:0040019 | GO-bp | Annotation by Michelle Graham. GO Biological Process: positive regulation of embryonic development | SoyBase | N/A | ISS |
GO:0042138 | GO-bp | Annotation by Michelle Graham. GO Biological Process: meiotic DNA double-strand break formation | SoyBase | N/A | ISS |
GO:0045010 | GO-bp | Annotation by Michelle Graham. GO Biological Process: actin nucleation | SoyBase | N/A | ISS |
GO:0045132 | GO-bp | Annotation by Michelle Graham. GO Biological Process: meiotic chromosome segregation | SoyBase | N/A | ISS |
GO:0045595 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of cell differentiation | SoyBase | N/A | ISS |
GO:0045893 | GO-bp | Annotation by Michelle Graham. GO Biological Process: positive regulation of transcription, DNA-dependent | SoyBase | N/A | ISS |
GO:0048316 | GO-bp | Annotation by Michelle Graham. GO Biological Process: seed development | SoyBase | N/A | ISS |
GO:0048765 | GO-bp | Annotation by Michelle Graham. GO Biological Process: root hair cell differentiation | SoyBase | N/A | ISS |
GO:0051301 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cell division | SoyBase | N/A | ISS |
GO:0071555 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cell wall organization | SoyBase | N/A | ISS |
GO:2000234 | GO-bp | Annotation by Michelle Graham. GO Biological Process: positive regulation of rRNA processing | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0005886 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane | SoyBase | N/A | ISS |
GO:0005515 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein binding | SoyBase | N/A | ISS |
GO:0016303 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: 1-phosphatidylinositol-3-kinase activity | SoyBase | N/A | ISS |
GO:0016772 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups | SoyBase | N/A | ISS |
GO:0016773 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: phosphotransferase activity, alcohol group as acceptor | SoyBase | N/A | ISS |
GO:0042802 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: identical protein binding | SoyBase | N/A | ISS |
GO:0043621 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein self-association | SoyBase | N/A | ISS |
UniRef100_B9RWX6 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Fkbp-rapamycin associated protein, putative n=1 Tax=Ricinus communis RepID=B9RWX6_RICCO | SoyBase | E_val: 2.00E-28 | ISS |
UniRef100_UPI0002337B17 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI0002337B17 related cluster n=1 Tax=unknown RepID=UPI0002337B17 | SoyBase | E_val: 5.00E-30 | ISS |
Glyma09g09690 not represented in the dataset |
Glyma09g09690 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma09g09690.1 sequence type=CDS gene model=Glyma09g09690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGCACACAGTGTCGTGCATTTGCAAAAGCCTTACACTATAATTAAAGAAATGGAATTTGAAGGAGCATGTTCCAAGAAGATGGATGCTAACCCAGTTGCTGTAGTTGAAGCTTTTATTCATATAAACAACCAATTACACCAACATGAGGTTGAGTATGAGAAACTGCAGCGATGGGATCATGCCCTCAAGGCTTATACAACAAAGGCTTCTCAAGCAACAAGTCCACATCTTGTCTTGGATGCCACTTTAGGATTCACCGTCTTATATGTAGTTTGCTTCCATGATTGTATAATCGTCGTAAAAAGGCATTGTTTTGTTGGGTATATTAAGACGGTTATTACAATAACCGTCTTAGATTCCAATAACTTTCTAAGACGGTTATGGTATAACTGTCGTAAAAAGTGCCATCAATTAATAAATAGTGCATTTAGTTGCACAGAAAATGAGTGA
>Glyma09g09690.1 sequence type=predicted peptide gene model=Glyma09g09690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MAHSVVHLQKPYTIIKEMEFEGACSKKMDANPVAVVEAFIHINNQLHQHEVEYEKLQRWDHALKAYTTKASQATSPHLVLDATLGFTVLYVVCFHDCIIVVKRHCFVGYIKTVITITVLDSNNFLRRLWYNCRKKCHQLINSAFSCTENE*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||